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Carg11692 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11692
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCoiled-coil domain-containing protein 18, putative isoform 2
Genome locationCarg_Chr02:3514915..3515453
RNA-Seq ExpressionCarg11692
SyntenyCarg11692
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571348.1 hypothetical protein SDJN03_30263, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2774.73Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSS-MQNCCHEEEVDELPSLYRLPDIVSAPF
        M R+DRKSSIE EPRTLKM+QIQFAREAALYV+NT+S+EEA++IFTEGLEA ECKAI D D S M+N  HE+E DELP LY+L DIV+APF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSS-MQNCCHEEEVDELPSLYRLPDIVSAPF
KAG6605318.1 hypothetical protein SDJN03_02635, partial [Cucurbita argyrosperma subsp. sororia]1.0e-41100Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSLYRLPDIVSAPF
        MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSLYRLPDIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSLYRLPDIVSAPF
XP_022947894.1 uncharacterized protein LOC111451648 [Cucurbita moschata]1.1e-4097.78Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSLYRLPDIVSAPF
        MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECK IEDRDSSMQNCCHEEEVDELPS YRLPDIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSLYRLPDIVSAPF
XP_023512402.1 uncharacterized protein LOC111777167 [Cucurbita pepo subsp. pepo]4.8e-2875.82Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSS-MQNCCHEEEVDELPSLYRLPDIVSAPF
        M R+DRKSSIE EPRTLKM+QIQFAREAALYV+NT+S+EEA++IFTEGLEAVECKAI D D S M+N  HE+E DELP LY+L DIV+APF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSS-MQNCCHEEEVDELPSLYRLPDIVSAPF
XP_038902606.1 uncharacterized protein LOC120089256 [Benincasa hispida]3.3e-2978.89Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSLYRLPDIVSAPF
        M  IDRKSSIENEPRTL+MHQIQFAREAALYVINT++IEEAM+IFTEGL+ VECKAI+D+DS M N  HEEE DEL SLY+  DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSLYRLPDIVSAPF
TrEMBL top hitse value%identityAlignment
A0A0A0LQ89 Uncharacterized protein5.7e-2775Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAI-EDRDSSMQNCCHEEEVDE-LPSLYRLPDIVSAPF
        M  IDRKSSIENEPRTLKMHQIQFAREAALYV+NT++IEEAM+IFTEGL+ VECKAI ED+DS ++N  H+EE+DE L   Y+L DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAI-EDRDSSMQNCCHEEEVDE-LPSLYRLPDIVSAPF
A0A1R3GDT9 Uncharacterized protein1.1e-1454.26Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEE----EVDELPSLYRLPDIVSAPF
        +  IDRKSSIE+EPRTL  HQIQ AREAA+YV++T SIEEAM IFTEGLE V   A  D   +      +E    E++E   L+   D+VSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEE----EVDELPSLYRLPDIVSAPF
A0A1S3CDH2 uncharacterized protein LOC1034996387.5e-2773.91Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAI--EDRDSSMQNCCHEEEVDELPSLYRLPDIVSAPF
        M  IDRKSSIENEPRTLKM+QIQFAREAALYV+NT++IEEAM+IFTEGL+ VECKAI  ED+DS M+N  H+EE+DEL    +L DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAI--EDRDSSMQNCCHEEEVDELPSLYRLPDIVSAPF
A0A6J1DBC1 uncharacterized protein LOC1110189151.1e-2570.65Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDR--DSSMQNCCHEEEVDELPSLYRLPDIVSAPF
        M RIDRKSSIENEPRTLKMHQIQFAREAALY++NT++I+EAMRIFTEGLE VECKA  DR  +   +   +EEE+ +L  LYR  DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDR--DSSMQNCCHEEEVDELPSLYRLPDIVSAPF
A0A6J1G887 uncharacterized protein LOC1114516485.3e-4197.78Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSLYRLPDIVSAPF
        MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECK IEDRDSSMQNCCHEEEVDELPS YRLPDIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSLYRLPDIVSAPF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33467.1 unknown protein3.7e-1040.62Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPS---LYRLP---DIVSAPF
        M+ ++R+SSIE EP TL + Q++ ARE ALYV+ T ++EEAM IFT+       +A E+R     N   EE+ D+      ++  P   DI +APF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPS---LYRLP---DIVSAPF
AT4G33467.2 unknown protein8.2e-1042Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFT----EGLEAVECKAIEDRDSSMQNCCHEEEVDELPS---LYRLP---DIVSAPF
        M+ ++R+SSIE EP TL + Q++ ARE ALYV+ T ++EEAM IFT    EGL     +A E+R     N   EE+ D+      ++  P   DI +APF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFT----EGLEAVECKAIEDRDSSMQNCCHEEEVDELPS---LYRLP---DIVSAPF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAATCGACAGAAAGTCATCCATTGAGAACGAGCCAAGAACTCTCAAAATGCACCAAATCCAATTTGCAAGAGAAGCAGCTCTGTATGTGATAAACACAAGCAG
CATAGAAGAAGCAATGAGGATTTTCACAGAGGGATTAGAAGCAGTGGAGTGTAAAGCGATTGAAGATAGAGATTCAAGCATGCAAAATTGCTGCCATGAAGAGGAAGTTG
ATGAGTTACCATCTTTATATCGGCTTCCAGACATTGTTTCTGCCCCTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATTCATTGTCGTCCCCTTGCCATAAACAGCCAGAACCCATTTTGGAGAGCTCAATCTTCTGTATTGGTGAAAGAAGATCGAAAGGCAATAATGGAAAGAATCGACAGAAA
GTCATCCATTGAGAACGAGCCAAGAACTCTCAAAATGCACCAAATCCAATTTGCAAGAGAAGCAGCTCTGTATGTGATAAACACAAGCAGCATAGAAGAAGCAATGAGGA
TTTTCACAGAGGGATTAGAAGCAGTGGAGTGTAAAGCGATTGAAGATAGAGATTCAAGCATGCAAAATTGCTGCCATGAAGAGGAAGTTGATGAGTTACCATCTTTATAT
CGGCTTCCAGACATTGTTTCTGCCCCTTTTTAG
Protein sequenceShow/hide protein sequence
MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSLYRLPDIVSAPF