; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg11703 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11703
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRas-related protein Rab-18
Genome locationCarg_Chr02:3572788..3577944
RNA-Seq ExpressionCarg11703
SyntenyCarg11703
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR005225 - Small GTP-binding protein domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605327.1 Ras-related protein RABC1, partial [Cucurbita argyrosperma subsp. sororia]3.1e-11091.27Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDT--------------------AGQERFRTLTSS
        MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDT                    AGQERFRTLTSS
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDT--------------------AGQERFRTLTSS

Query:  YYRGAQGIIMVYDVTRRETFTNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPS
        YYRGAQGIIMVYDVTRRETFTNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPS
Subjt:  YYRGAQGIIMVYDVTRRETFTNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPS

Query:  LLSEGSKGVRKNIFKERPPQLDASTSSCC
        LLSEGSKGVRKNIFKERPPQLDASTSSCC
Subjt:  LLSEGSKGVRKNIFKERPPQLDASTSSCC

XP_008460888.1 PREDICTED: ras-related protein RABC1-like [Cucumis melo]8.3e-10893.3Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDSTSNQ EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNL+EVWA+EIDLYSTNP+CIKMLVGNKVDKESYRTVTKKEGI++ARE+GCLFIECSAKTRVNVQQCFEELVLKIL+TPSLLSEGSKGVR+NIFKE+PPQ
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
         DAS SSCC
Subjt:  LDASTSSCC

XP_022948144.1 ras-related protein RABC1-like [Cucurbita moschata]7.8e-114100Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
        LDASTSSCC
Subjt:  LDASTSSCC

XP_023007246.1 ras-related protein RABC1-like isoform X1 [Cucurbita maxima]3.9e-11399.04Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNLTEVWAREIDLYSTNP+CIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKE+PPQ
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
        LDASTSSCC
Subjt:  LDASTSSCC

XP_023534648.1 ras-related protein RABC1-like [Cucurbita pepo subsp. pepo]3.0e-11399.52Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDSTSNQ EFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
        LDASTSSCC
Subjt:  LDASTSSCC

TrEMBL top hitse value%identityAlignment
A0A1S3CDH6 ras-related protein RABC1-like4.0e-10893.3Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDSTSNQ EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNL+EVWA+EIDLYSTNP+CIKMLVGNKVDKESYRTVTKKEGI++ARE+GCLFIECSAKTRVNVQQCFEELVLKIL+TPSLLSEGSKGVR+NIFKE+PPQ
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
         DAS SSCC
Subjt:  LDASTSSCC

A0A5D3BQN6 Ras-related protein RABC1-like4.0e-10893.3Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDSTSNQ EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNL+EVWA+EIDLYSTNP+CIKMLVGNKVDKESYRTVTKKEGI++ARE+GCLFIECSAKTRVNVQQCFEELVLKIL+TPSLLSEGSKGVR+NIFKE+PPQ
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
         DAS SSCC
Subjt:  LDASTSSCC

A0A6J1DU73 ras-related protein RABC1-like9.0e-10893.78Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDS+SNQ EFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNL+EVWA+EIDLYSTN +CIKMLVGNKVDKESYRTVTKKEGI++ARE+GCLFIECSAKTRVNVQQCFEELVLKIL+TPSLLSEGSKGVR+NIFKE+PPQ
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
         DASTSSCC
Subjt:  LDASTSSCC

A0A6J1G907 ras-related protein RABC1-like3.8e-114100Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
        LDASTSSCC
Subjt:  LDASTSSCC

A0A6J1L007 ras-related protein RABC1-like isoform X11.9e-11399.04Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNLTEVWAREIDLYSTNP+CIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKE+PPQ
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
        LDASTSSCC
Subjt:  LDASTSSCC

SwissProt top hitse value%identityAlignment
O23657 Ras-related protein RABC11.1e-9480.38Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNL+++WA+EIDLYSTN +CIKMLVGNKVDKES R V+KKEGI+ ARE+GCLF+ECSAKTRVNV+QCFEELVLKILETPSL +EGS G +KNIFK+ P Q
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
          +++SS C
Subjt:  LDASTSSCC

O49841 Ras-related protein RABC2a1.6e-8269.38Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M S+S Q  +D  FK+L+IGDSGVGKSSLL+SF S S EDL+PTIGVDFK+K +T GGK+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRRETF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNL +VW +EI+LYSTN EC++MLVGNKVD+ES R V+++EGI LA+E  C+F+ECSA+TR NV+QCFEEL LKI+E PSLL EGS  V++NI K++P  
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
           + S CC
Subjt:  LDASTSSCC

P36862 GTP-binding protein yptV31.3e-5863.69Show/hide
Query:  DYLFKLLMIGDSGVGKSSLLLSFTSDSFED-LSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLTEVWAR
        DY FK+L++GDSGVGKS +L  FTS  FE+  + TIGVDFKVKY+TA GK+ KL IWDTAGQERFRTLTSSYYRGAQGII VYDVTRR+TF +L   W R
Subjt:  DYLFKLLMIGDSGVGKSSLLLSFTSDSFED-LSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLTEVWAR

Query:  EIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKG
        E D+YST    IKM+V NKVD  + R V+ +EG + AR HGCLF+E SA+  + V Q FEEL+LKIL+TP LL   + G
Subjt:  EIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKG

Q6DHC1 Ras-related protein Rab-18-B4.2e-5456.92Show/hide
Query:  KLLMIGDSGVGKSSLLLSFTSDSFE-DLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLTEVWAREIDL
        K+L+IG+SGVGKSSLLL FT D+F+ +L+ TIGVDFKVK +   G + KLAIWDTAGQERFRTLT SYYRGAQG+I+VYDVT+R+TFT L E W  E++ 
Subjt:  KLLMIGDSGVGKSSLLLSFTSDSFE-DLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLTEVWAREIDL

Query:  YSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQLDASTSSC
        Y T  + +KMLVGNK+DK++ R V + EG++ AR+H  LFIE SAKTR  VQ  FEELV KIL+TP L     +     +    P +  A    C
Subjt:  YSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQLDASTSSC

Q9SF92 Ras-related protein RABC2b2.4e-7365.07Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M S+S Q  +D  FK+L+IGDSGVGKSSLLLSF S S EDL+PTIGVDFK+K +   GK+LKL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+RETF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
         NL ++WA+EI+LYSTN +CIKMLVGNKVD+ES R V+++EG+ LA++  CLF ECSA+TR NV  CFEEL LKI+E PSLL EGS  V+      R P 
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
          A    CC
Subjt:  LDASTSSCC

Arabidopsis top hitse value%identityAlignment
AT1G43890.1 RAB GTPASE HOMOLOG B187.8e-9680.38Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNL+++WA+EIDLYSTN +CIKMLVGNKVDKES R V+KKEGI+ ARE+GCLF+ECSAKTRVNV+QCFEELVLKILETPSL +EGS G +KNIFK+ P Q
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
          +++SS C
Subjt:  LDASTSSCC

AT1G43890.2 RAB GTPASE HOMOLOG B187.8e-9680.38Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNL+++WA+EIDLYSTN +CIKMLVGNKVDKES R V+KKEGI+ ARE+GCLF+ECSAKTRVNV+QCFEELVLKILETPSL +EGS G +KNIFK+ P Q
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
          +++SS C
Subjt:  LDASTSSCC

AT1G43890.3 RAB GTPASE HOMOLOG B187.8e-9680.38Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNL+++WA+EIDLYSTN +CIKMLVGNKVDKES R V+KKEGI+ ARE+GCLF+ECSAKTRVNV+QCFEELVLKILETPSL +EGS G +KNIFK+ P Q
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
          +++SS C
Subjt:  LDASTSSCC

AT3G09910.1 RAB GTPase homolog C2B1.7e-7465.07Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M S+S Q  +D  FK+L+IGDSGVGKSSLLLSF S S EDL+PTIGVDFK+K +   GK+LKL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+RETF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
         NL ++WA+EI+LYSTN +CIKMLVGNKVD+ES R V+++EG+ LA++  CLF ECSA+TR NV  CFEEL LKI+E PSLL EGS  V+      R P 
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
          A    CC
Subjt:  LDASTSSCC

AT5G03530.1 RAB GTPase homolog C2A1.2e-8369.38Show/hide
Query:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M S+S Q  +D  FK+L+IGDSGVGKSSLL+SF S S EDL+PTIGVDFK+K +T GGK+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRRETF
Subjt:  MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ
        TNL +VW +EI+LYSTN EC++MLVGNKVD+ES R V+++EGI LA+E  C+F+ECSA+TR NV+QCFEEL LKI+E PSLL EGS  V++NI K++P  
Subjt:  TNLTEVWAREIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQ

Query:  LDASTSSCC
           + S CC
Subjt:  LDASTSSCC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCGACGTCGAATCAAATCGAGTTTGATTACTTGTTCAAATTGTTGATGATTGGGGATTCGGGGGTTGGGAAAAGTAGTCTGCTGTTGAGTTTCACTTCCGATAG
CTTCGAGGATCTCTCACCTACAATCGGCGTCGATTTTAAGGTAAAGTATGTTACTGCTGGGGGTAAGAAGCTGAAACTTGCAATTTGGGATACAGCTGGGCAGGAGAGAT
TCAGAACATTGACTAGTTCATACTACAGAGGTGCCCAAGGGATCATTATGGTTTATGATGTAACGCGGAGAGAGACATTTACAAACCTGACTGAGGTATGGGCGAGGGAA
ATAGACCTATATTCAACAAATCCAGAGTGCATAAAGATGCTTGTTGGAAACAAAGTTGATAAGGAAAGTTATAGAACAGTAACAAAGAAAGAGGGAATTGAGCTGGCCAG
GGAACACGGTTGTCTTTTTATCGAATGCAGTGCCAAAACTCGAGTCAATGTACAACAGTGCTTTGAAGAACTTGTTCTAAAGATTCTCGAGACGCCGAGCCTTTTATCTG
AAGGGTCTAAAGGAGTGAGAAAGAACATCTTCAAGGAAAGGCCTCCACAGCTTGATGCATCCACAAGCAGTTGTTGCTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTTTTTTTTTTTTTTTTTGTGGTTGCCTCCTTCCCAATCAATCGATCAGCCTGAGTTGACTCCCGAGTTAAGGGCGGGCTCGGCACGGGTCGGCATTTTCAATCGAA
GTTCCATTTTCTTAATCGATTACCTTCACCACCACAAATAATAGAAACGAAATCAAGATCAGGGAGGTCTCCAAATTCTTTGTTTCTTTTTTCCTCCTCACTGGACGCTT
CATCAATTTCTATTAGATTTTGGCATTTGGGTATGTGATCTGGAAGCGATCTTATTTTGAAAATTGTTGATTGAGTTGGACCCGTTGGAGGGCGGATTCGATGGATTCGA
CGTCGAATCAAATCGAGTTTGATTACTTGTTCAAATTGTTGATGATTGGGGATTCGGGGGTTGGGAAAAGTAGTCTGCTGTTGAGTTTCACTTCCGATAGCTTCGAGGAT
CTCTCACCTACAATCGGCGTCGATTTTAAGGTAAAGTATGTTACTGCTGGGGGTAAGAAGCTGAAACTTGCAATTTGGGATACAGCTGGGCAGGAGAGATTCAGAACATT
GACTAGTTCATACTACAGAGGTGCCCAAGGGATCATTATGGTTTATGATGTAACGCGGAGAGAGACATTTACAAACCTGACTGAGGTATGGGCGAGGGAAATAGACCTAT
ATTCAACAAATCCAGAGTGCATAAAGATGCTTGTTGGAAACAAAGTTGATAAGGAAAGTTATAGAACAGTAACAAAGAAAGAGGGAATTGAGCTGGCCAGGGAACACGGT
TGTCTTTTTATCGAATGCAGTGCCAAAACTCGAGTCAATGTACAACAGTGCTTTGAAGAACTTGTTCTAAAGATTCTCGAGACGCCGAGCCTTTTATCTGAAGGGTCTAA
AGGAGTGAGAAAGAACATCTTCAAGGAAAGGCCTCCACAGCTTGATGCATCCACAAGCAGTTGTTGCTGAAATTTGATTCATTTGCTGGTTATTTTCCCAAGTTATTTGT
AAAACTAAAGTAGAAAAGCATGGTGTTACAGTTTTATTATAATATCTCTCACAAATTCTGTTACAAATTGAAGGGGGTCTTATCTTCGTGCTGGCTTTCTTTCTTGTACA
GGCAAAAGTTCAAAATTGGAAATATAAGATTTCATCCTGTCAGTGTGTCATGGTCTCTTAAGTTGCGATGTCATCGTCAGTCGTACAGTGGAACCAGAAATACTCGGTAA
GTGTTCCCCTTATTGGGGTTAGATTCAAGCACATACAATCACGAATGAGACCTATCATATCAATATATATTCCCTTTAGGCGGCTGTCCTAAGCAAGTAATTGGATATGT
ATTTACTCTACACACAGTCTACACGTCCGAGTATGAATCCACCATTTAGTTTACACACCTCTTTGACCCCTTTCTTGGCCAGGTTAGCATGTGTCCATATCATCATAAAA
AAATGGGTATTCTCCG
Protein sequenceShow/hide protein sequence
MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLTEVWARE
IDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCFEELVLKILETPSLLSEGSKGVRKNIFKERPPQLDASTSSCC