; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg11704 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11704
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTetratricopeptide-like helical
Genome locationCarg_Chr02:3578940..3581324
RNA-Seq ExpressionCarg11704
SyntenyCarg11704
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605328.1 hypothetical protein SDJN03_02645, partial [Cucurbita argyrosperma subsp. sororia]1.9e-6495.31Show/hide
Query:  NQTLLCFTVHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCP
        N +LL    HAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCP
Subjt:  NQTLLCFTVHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCP

Query:  CLSKSHVQAVIWHWRLDPHIINGCDSAS
        CLSKSHVQAVIWHWRLDPHIINGCDSAS
Subjt:  CLSKSHVQAVIWHWRLDPHIINGCDSAS

KAG7035286.1 hypothetical protein SDJN02_02081, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-152100Show/hide
Query:  SRQTYHIFSQFPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPTPSDSTEILRCEFFCEREASAAIFRGVSEPVELLDRGRELQALGDFNQ
        SRQTYHIFSQFPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPTPSDSTEILRCEFFCEREASAAIFRGVSEPVELLDRGRELQALGDFNQ
Subjt:  SRQTYHIFSQFPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPTPSDSTEILRCEFFCEREASAAIFRGVSEPVELLDRGRELQALGDFNQ

Query:  TLLCFTVHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCL
        TLLCFTVHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCL
Subjt:  TLLCFTVHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCL

Query:  SKSHVQAVIWHWRLDPHIINGCDSASVTIWPWLQHRRPLNYDVEVARFRAKARCCFLAKHLDL
        SKSHVQAVIWHWRLDPHIINGCDSASVTIWPWLQHRRPLNYDVEVARFRAKARCCFLAKHLDL
Subjt:  SKSHVQAVIWHWRLDPHIINGCDSASVTIWPWLQHRRPLNYDVEVARFRAKARCCFLAKHLDL

XP_008460886.1 PREDICTED: uncharacterized protein LOC103499627 [Cucumis melo]2.4e-4345.95Show/hide
Query:  SQFPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPT---------PSDSTEILRCEFF-----CEREASAAIFRGVSEPVELLDRGRELQA
        S   SSSSH+PSTNP+ K SKPLSF +H  LPTRRLLLFSLP+ T         P   +     E F      E+EASAAI R VSE VELLD+GRELQA
Subjt:  SQFPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPT---------PSDSTEILRCEFF-----CEREASAAIFRGVSEPVELLDRGRELQA

Query:  LGDFNQTLLCFT------------------------------------------------VHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEK
        LGDFNQ LL FT                                                VHAA+ AAL VD HA LLAENQFTI TLLD HYV+IS   
Subjt:  LGDFNQTLLCFT------------------------------------------------VHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEK

Query:  SH-------------------HKYLSEL------QFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV---QAVIWHWRL
        +                     K  SE+       +++M     SDVLSFK NAIADR + KCFQQ EWAI HV CPCLSKS+     A I H RL
Subjt:  SH-------------------HKYLSEL------QFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV---QAVIWHWRL

XP_022946993.1 uncharacterized protein LOC111451005 [Cucurbita moschata]4.3e-7778.97Show/hide
Query:  FPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPTPSDSTEILRCEFFCEREASAAIFRGVSEPVELLDRGRELQALGDFNQTLLCFTVHAA
        FPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRL+LFSLPLPTPSDSTEILRCEFFC+REASAAIFRGVSEP ELLDRGRELQALGDFNQTLLCFTV   
Subjt:  FPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPTPSDSTEILRCEFFCEREASAAIFRGVSEPVELLDRGRELQALGDFNQTLLCFTVHAA

Query:  MDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV
                                          EKSHHKYLSELQFQQMEK AGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV
Subjt:  MDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV

XP_023532647.1 uncharacterized protein LOC111794747 [Cucurbita pepo subsp. pepo]2.4e-7578.46Show/hide
Query:  FPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPTPSDSTEILRCEFFCEREASAAIFRGVSEPVELLDRGRELQALGDFNQTLLCFTVHAA
        FPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPL TPSDSTEIL CEFFCEREASAAIF GVSEPVELLDRGRELQ LGDFNQTLLCFTV   
Subjt:  FPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPTPSDSTEILRCEFFCEREASAAIFRGVSEPVELLDRGRELQALGDFNQTLLCFTVHAA

Query:  MDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV
                                          EKSHHKYLSELQFQQMEKDAGSDVLSF QNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV
Subjt:  MDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV

TrEMBL top hitse value%identityAlignment
A0A1S3CCZ2 uncharacterized protein LOC1034996271.2e-4345.95Show/hide
Query:  SQFPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPT---------PSDSTEILRCEFF-----CEREASAAIFRGVSEPVELLDRGRELQA
        S   SSSSH+PSTNP+ K SKPLSF +H  LPTRRLLLFSLP+ T         P   +     E F      E+EASAAI R VSE VELLD+GRELQA
Subjt:  SQFPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPT---------PSDSTEILRCEFF-----CEREASAAIFRGVSEPVELLDRGRELQA

Query:  LGDFNQTLLCFT------------------------------------------------VHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEK
        LGDFNQ LL FT                                                VHAA+ AAL VD HA LLAENQFTI TLLD HYV+IS   
Subjt:  LGDFNQTLLCFT------------------------------------------------VHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEK

Query:  SH-------------------HKYLSEL------QFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV---QAVIWHWRL
        +                     K  SE+       +++M     SDVLSFK NAIADR + KCFQQ EWAI HV CPCLSKS+     A I H RL
Subjt:  SH-------------------HKYLSEL------QFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV---QAVIWHWRL

A0A5D3BSI6 Tetratricopeptide-like helical1.2e-4345.95Show/hide
Query:  SQFPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPT---------PSDSTEILRCEFF-----CEREASAAIFRGVSEPVELLDRGRELQA
        S   SSSSH+PSTNP+ K SKPLSF +H  LPTRRLLLFSLP+ T         P   +     E F      E+EASAAI R VSE VELLD+GRELQA
Subjt:  SQFPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPT---------PSDSTEILRCEFF-----CEREASAAIFRGVSEPVELLDRGRELQA

Query:  LGDFNQTLLCFT------------------------------------------------VHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEK
        LGDFNQ LL FT                                                VHAA+ AAL VD HA LLAENQFTI TLLD HYV+IS   
Subjt:  LGDFNQTLLCFT------------------------------------------------VHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEK

Query:  SH-------------------HKYLSEL------QFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV---QAVIWHWRL
        +                     K  SE+       +++M     SDVLSFK NAIADR + KCFQQ EWAI HV CPCLSKS+     A I H RL
Subjt:  SH-------------------HKYLSEL------QFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV---QAVIWHWRL

A0A6J1G5E0 uncharacterized protein LOC1114510052.1e-7778.97Show/hide
Query:  FPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPTPSDSTEILRCEFFCEREASAAIFRGVSEPVELLDRGRELQALGDFNQTLLCFTVHAA
        FPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRL+LFSLPLPTPSDSTEILRCEFFC+REASAAIFRGVSEP ELLDRGRELQALGDFNQTLLCFTV   
Subjt:  FPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPTPSDSTEILRCEFFCEREASAAIFRGVSEPVELLDRGRELQALGDFNQTLLCFTVHAA

Query:  MDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV
                                          EKSHHKYLSELQFQQMEK AGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV
Subjt:  MDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHV

A0A6J1KY70 uncharacterized protein LOC111499802 isoform X11.8e-3666.15Show/hide
Query:  FRGVSEPVELLDRGRELQALGDFNQTLLCFTVHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNA
        FRGVSEPVELLDRGRELQALGDFNQTLLCFTV                                     EKSHHKYLSELQFQQ+EKDAGSDVLSFKQNA
Subjt:  FRGVSEPVELLDRGRELQALGDFNQTLLCFTVHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNA

Query:  IADRPSRKCFQQTEWAINHVPCPCLSKSHV
        IADRPSRKCFQQTEWAINHVPCP +   H+
Subjt:  IADRPSRKCFQQTEWAINHVPCPCLSKSHV

A0A6J1L778 uncharacterized protein LOC111499802 isoform X21.8e-3666.15Show/hide
Query:  FRGVSEPVELLDRGRELQALGDFNQTLLCFTVHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNA
        FRGVSEPVELLDRGRELQALGDFNQTLLCFTV                                     EKSHHKYLSELQFQQ+EKDAGSDVLSFKQNA
Subjt:  FRGVSEPVELLDRGRELQALGDFNQTLLCFTVHAAMDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNA

Query:  IADRPSRKCFQQTEWAINHVPCPCLSKSHV
        IADRPSRKCFQQTEWAINHVPCP +   H+
Subjt:  IADRPSRKCFQQTEWAINHVPCPCLSKSHV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCACGTCAAACATATCATATATTTAGCCAATTTCCTTCTTCTTCCTCGCATGATCCTTCAACAAATCCTAACCCTAAGCCTTCAAAGCCACTCTCATTTTCTGACCATTA
TCGATTACCGACCAGACGTTTGTTGCTCTTCTCCCTCCCCTTGCCCACTCCCTCCGATTCAACCGAGATCTTGCGATGTGAGTTCTTCTGCGAGAGAGAAGCGAGTGCTG
CCATTTTTCGAGGAGTATCGGAACCTGTGGAGCTTCTTGATAGAGGCAGGGAGTTGCAAGCTCTTGGCGATTTCAATCAAACTCTTCTCTGCTTCACTGTGCATGCGGCA
ATGGATGCAGCTTTATGCGTGGATGTTCATGCTCCATTGCTGGCTGAAAATCAATTCACCATTACCACTTTGCTTGATTCTCATTATGTGAATATCTCATATGAAAAGTC
CCATCACAAGTACCTGTCGGAGCTGCAATTCCAACAAATGGAGAAAGATGCTGGGTCTGATGTGCTTTCATTCAAGCAAAATGCCATTGCTGACAGGCCAAGCAGGAAGT
GCTTCCAGCAAACTGAGTGGGCCATCAACCATGTGCCCTGCCCCTGTCTTTCTAAATCACATGTTCAGGCTGTTATTTGGCATTGGAGACTTGATCCACACATCATCAAC
GGCTGTGATTCTGCTTCAGTGACCATATGGCCTTGGTTGCAGCATCGGAGGCCTCTGAATTATGATGTAGAAGTTGCACGATTTCGTGCAAAAGCTCGGTGCTGCTTCCT
AGCAAAGCACTTAGATCTT
mRNA sequenceShow/hide mRNA sequence
TCACGTCAAACATATCATATATTTAGCCAATTTCCTTCTTCTTCCTCGCATGATCCTTCAACAAATCCTAACCCTAAGCCTTCAAAGCCACTCTCATTTTCTGACCATTA
TCGATTACCGACCAGACGTTTGTTGCTCTTCTCCCTCCCCTTGCCCACTCCCTCCGATTCAACCGAGATCTTGCGATGTGAGTTCTTCTGCGAGAGAGAAGCGAGTGCTG
CCATTTTTCGAGGAGTATCGGAACCTGTGGAGCTTCTTGATAGAGGCAGGGAGTTGCAAGCTCTTGGCGATTTCAATCAAACTCTTCTCTGCTTCACTGTGCATGCGGCA
ATGGATGCAGCTTTATGCGTGGATGTTCATGCTCCATTGCTGGCTGAAAATCAATTCACCATTACCACTTTGCTTGATTCTCATTATGTGAATATCTCATATGAAAAGTC
CCATCACAAGTACCTGTCGGAGCTGCAATTCCAACAAATGGAGAAAGATGCTGGGTCTGATGTGCTTTCATTCAAGCAAAATGCCATTGCTGACAGGCCAAGCAGGAAGT
GCTTCCAGCAAACTGAGTGGGCCATCAACCATGTGCCCTGCCCCTGTCTTTCTAAATCACATGTTCAGGCTGTTATTTGGCATTGGAGACTTGATCCACACATCATCAAC
GGCTGTGATTCTGCTTCAGTGACCATATGGCCTTGGTTGCAGCATCGGAGGCCTCTGAATTATGATGTAGAAGTTGCACGATTTCGTGCAAAAGCTCGGTGCTGCTTCCT
AGCAAAGCACTTAGATCTT
Protein sequenceShow/hide protein sequence
SRQTYHIFSQFPSSSSHDPSTNPNPKPSKPLSFSDHYRLPTRRLLLFSLPLPTPSDSTEILRCEFFCEREASAAIFRGVSEPVELLDRGRELQALGDFNQTLLCFTVHAA
MDAALCVDVHAPLLAENQFTITTLLDSHYVNISYEKSHHKYLSELQFQQMEKDAGSDVLSFKQNAIADRPSRKCFQQTEWAINHVPCPCLSKSHVQAVIWHWRLDPHIIN
GCDSASVTIWPWLQHRRPLNYDVEVARFRAKARCCFLAKHLDL