CuGenDBv2

Gene ID	Carg11732
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Succinate-semialdehyde dehydrogenase
Genome location	Carg_Chr02:3775939..3776337
RNA-Seq Expression	Carg11732
Synteny	Carg11732
Gene Ontology terms	GO:0009450 - gamma-aminobutyric acid catabolic process (biological process) GO:0005739 - mitochondrion (cellular component) GO:0004777 - succinate-semialdehyde dehydrogenase (NAD+) activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6605354.1 Succinate-semialdehyde dehydrogenase, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-36

98.92

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Query:  MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
        MTMTVAARAIATARSVVRASRLRNVFTAL+SQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
Subjt:  MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV

KAG7035313.1 Succinate-semialdehyde dehydrogenase, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]

5.8e-37

100

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Query:  MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
        MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
Subjt:  MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV

XP_023007152.1 succinate-semialdehyde dehydrogenase, mitochondrial isoform X1 [Cucurbita maxima]

5.9e-29

87.1

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Query:  MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
        MTMTVA RAIATARS VRASRLRNVFTA KSQSHALLIRQMSSEAQSMRSEE       QSIAARLR+SGL RSQGLIGGQWIDAYDGRTIKV
Subjt:  MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV

XP_023007153.1 succinate-semialdehyde dehydrogenase, mitochondrial isoform X2 [Cucurbita maxima]

5.9e-29

87.1

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Query:  MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
        MTMTVA RAIATARS VRASRLRNVFTA KSQSHALLIRQMSSEAQSMRSEE       QSIAARLR+SGL RSQGLIGGQWIDAYDGRTIKV
Subjt:  MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV

XP_023534522.1 succinate-semialdehyde dehydrogenase, mitochondrial [Cucurbita pepo subsp. pepo]

2.9e-36

98.92

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Query:  MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
        MTMTVAARAIATARSVVRASRLRNVFTA KSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
Subjt:  MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C2Z2 Succinate-semialdehyde dehydrogenase

7.5e-14

57.58

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Query:  MTMTVAARAIATARSVVRASRL------RNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
        M MTV AR IA ARS+V +S+         VF A KS SH LLIRQMSSEA              QSI  RL +SGLLRSQGLIGG+WIDAYDG+TI+V
Subjt:  MTMTVAARAIATARSVVRASRL------RNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV

A0A5A7UJC6 Succinate-semialdehyde dehydrogenase

7.5e-14

57.58

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Query:  MTMTVAARAIATARSVVRASRL------RNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
        M MTV AR IA ARS+V +S+         VF A KS SH LLIRQMSSEA              QSI  RL +SGLLRSQGLIGG+WIDAYDG+TI+V
Subjt:  MTMTVAARAIATARSVVRASRL------RNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV

A0A6J1D7B8 Succinate-semialdehyde dehydrogenase

1.6e-16

62.63

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Query:  MTMTVAARAIATARSVVRASRLR------NVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
        M M VAA A+AT RSVVR+S LR      +VF A KS+SH LLIRQMSSEA              QSIAARL +SGLLRSQGLIGG+WIDAYDG+T KV
Subjt:  MTMTVAARAIATARSVVRASRLR------NVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV

A0A6J1KXV4 Succinate-semialdehyde dehydrogenase

2.8e-29

87.1

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Query:  MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
        MTMTVA RAIATARS VRASRLRNVFTA KSQSHALLIRQMSSEAQSMRSEE       QSIAARLR+SGL RSQGLIGGQWIDAYDGRTIKV
Subjt:  MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV

A0A6J1L6X5 Succinate-semialdehyde dehydrogenase

2.8e-29

87.1

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Query:  MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
        MTMTVA RAIATARS VRASRLRNVFTA KSQSHALLIRQMSSEAQSMRSEE       QSIAARLR+SGL RSQGLIGGQWIDAYDGRTIKV
Subjt:  MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV

SwissProt top hits

e value

%identity

Alignment

B9F3B6 Succinate-semialdehyde dehydrogenase, mitochondrial

9.5e-06

37.21

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Query:  IATARSVVRASRL--RNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
        +A A ++ RA+ L  R++  A  + S  +L+R             + MS +  +   ++R +GLLR+QGLIGG+W+DAYDG+TI+V
Subjt:  IATARSVVRASRL--RNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV

Q9SAK4 Succinate-semialdehyde dehydrogenase, mitochondrial

2.7e-08

59.09

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Query:  SEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
        S+ + MS + QS++ +LR+SGLLR+QGLIGG+W+D+YD +TIKV
Subjt:  SEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV

Arabidopsis top hits

e value

%identity

Alignment

AT1G79440.1 aldehyde dehydrogenase 5F1

1.9e-09

59.09

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Query:  SEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV
        S+ + MS + QS++ +LR+SGLLR+QGLIGG+W+D+YD +TIKV
Subjt:  SEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV

Sequences

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CDS sequence

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ATGACTATGACGGTCGCCGCAAGAGCAATCGCAACGGCTCGATCAGTGGTGCGAGCGAGCAGGCTCCGTAATGTGTTTACTGCGCTGAAATCTCAGTCTCACGCTCTTCT
CATTCGTCAGATGAGCTCGGAGGCGCAGAGTATGCGCTCCGAGGAGCAGAGCATGAGCTCGGAGGTGCAGAGCATCGCCGCTCGTCTTCGTAATTCTGGACTGTTACGAA
GCCAAGGCCTCATTGGCGGCCAGTGGATTGATGCTTACGATGGGAGGACCATTAAGGTATGA

mRNA sequence

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ACTAAGAAGAAGAATCAACAGAGATAACGAAGATGACTATGACGGTCGCCGCAAGAGCAATCGCAACGGCTCGATCAGTGGTGCGAGCGAGCAGGCTCCGTAATGTGTTT
ACTGCGCTGAAATCTCAGTCTCACGCTCTTCTCATTCGTCAGATGAGCTCGGAGGCGCAGAGTATGCGCTCCGAGGAGCAGAGCATGAGCTCGGAGGTGCAGAGCATCGC
CGCTCGTCTTCGTAATTCTGGACTGTTACGAAGCCAAGGCCTCATTGGCGGCCAGTGGATTGATGCTTACGATGGGAGGACCATTAAGGTATGA

Protein sequence

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MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKV

Carg11732 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome