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Carg11748 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11748
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr02:3923568..3923911
RNA-Seq ExpressionCarg11748
SyntenyCarg11748
Gene Ontology termsNA
InterPro domainsIPR019616 - Ycf54 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605371.1 putative protein ycf54, partial [Cucurbita argyrosperma subsp. sororia]8.5e-30100Show/hide
Query:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKV
        FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKV
Subjt:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKV

KAG7035328.1 hypothetical protein SDJN02_02123, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-43100Show/hide
Query:  MGRFMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKVWKAVFDYSNVVNEYDQLK
        MGRFMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKVWKAVFDYSNVVNEYDQLK
Subjt:  MGRFMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKVWKAVFDYSNVVNEYDQLK

XP_022149576.1 uncharacterized protein LOC111017973 [Momordica charantia]6.3e-2588.89Show/hide
Query:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAE
        FMKLRLDRVLAESYEA+S E+A+ASNPTNIEFEKPEKWVAPYPKYEYGWWE FLPPVTK EA+
Subjt:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAE

XP_022947359.1 uncharacterized protein LOC111451246 [Cucurbita moschata]8.5e-30100Show/hide
Query:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKV
        FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKV
Subjt:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKV

XP_023533874.1 uncharacterized protein LOC111795592 [Cucurbita pepo subsp. pepo]9.4e-2996.97Show/hide
Query:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKV
        FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKW APYPKYEYGWWEIFLPPVTKTEAEAK+
Subjt:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKV

TrEMBL top hitse value%identityAlignment
A0A1S3C2E4 uncharacterized protein LOC1034962597.5e-2485.71Show/hide
Query:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAE
        FMKLRLDRVLAESYEA+S+E+ALAS PTN+EFEKPEKWVAPY KYEYGWWE FLPPVTK EA+
Subjt:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAE

A0A5A7SVU2 Uncharacterized protein7.5e-2485.71Show/hide
Query:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAE
        FMKLRLDRVLAESYEA+S+E+ALAS PTN+EFEKPEKWVAPY KYEYGWWE FLPPVTK EA+
Subjt:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAE

A0A6J1D8T3 uncharacterized protein LOC1110179733.0e-2588.89Show/hide
Query:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAE
        FMKLRLDRVLAESYEA+S E+A+ASNPTNIEFEKPEKWVAPYPKYEYGWWE FLPPVTK EA+
Subjt:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAE

A0A6J1G6K2 uncharacterized protein LOC1114512464.1e-30100Show/hide
Query:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKV
        FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKV
Subjt:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKV

A0A6J1JCP0 uncharacterized protein LOC1114845251.7e-2385.71Show/hide
Query:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAE
        FMKLRLDRVLAESYEA+SLE+ALAS PTN+EFEKPEKWVAPY KYEYGWWE FLPPV K EA+
Subjt:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G58250.1 unknown protein1.2e-2170.97Show/hide
Query:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEA
        FMKLRLDRVL +S+EA SL++ALASNPT +EF+KP+ WVAPYPKYE GWW+ FLP VT+  A
Subjt:  FMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGGTTCATGAAGCTGAGACTGGACCGAGTTTTAGCCGAAAGCTACGAAGCCGATAGCTTAGAACAAGCATTGGCTTCTAACCCGACCAACATCGAGTTTGAGAA
GCCCGAAAAATGGGTGGCTCCCTACCCCAAGTATGAATATGGGTGGTGGGAGATTTTCTTGCCGCCAGTGACAAAAACAGAAGCAGAAGCAAAAGTTTGGAAGGCAGTTT
TTGATTATTCTAATGTGGTAAATGAGTATGATCAATTAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGGTTCATGAAGCTGAGACTGGACCGAGTTTTAGCCGAAAGCTACGAAGCCGATAGCTTAGAACAAGCATTGGCTTCTAACCCGACCAACATCGAGTTTGAGAA
GCCCGAAAAATGGGTGGCTCCCTACCCCAAGTATGAATATGGGTGGTGGGAGATTTTCTTGCCGCCAGTGACAAAAACAGAAGCAGAAGCAAAAGTTTGGAAGGCAGTTT
TTGATTATTCTAATGTGGTAAATGAGTATGATCAATTAAAGTGA
Protein sequenceShow/hide protein sequence
MGRFMKLRLDRVLAESYEADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAEAKVWKAVFDYSNVVNEYDQLK