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Carg11750 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11750
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionYcf54-like protein
Genome locationCarg_Chr02:3924797..3926034
RNA-Seq ExpressionCarg11750
SyntenyCarg11750
Gene Ontology termsNA
InterPro domainsIPR019616 - Ycf54 protein
IPR038409 - Ycf54-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605371.1 putative protein ycf54, partial [Cucurbita argyrosperma subsp. sororia]7.3e-83100Show/hide
Query:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK
        MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK
Subjt:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK

Query:  FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
        FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
Subjt:  FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
KAG7035329.1 putative protein ycf54 [Cucurbita argyrosperma subsp. argyrosperma]7.3e-83100Show/hide
Query:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK
        MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK
Subjt:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK

Query:  FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
        FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
Subjt:  FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
XP_022947359.1 uncharacterized protein LOC111451246 [Cucurbita moschata]1.1e-8198.78Show/hide
Query:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK
        MLGTVNLVMGSS+AAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFN AIAAVNDQIVSSDSADEQESNKYYFVVANAK
Subjt:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK

Query:  FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
        FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
Subjt:  FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
XP_023007237.1 uncharacterized protein LOC111499783 [Cucurbita maxima]1.5e-7291.46Show/hide
Query:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK
        MLGT NLVMGSS+AAMLTSTQCTAMKSLASFRIGHHSHCR LSLPSGLPSASGFSSCFFASRGSSP     AAVNDQ+VSS SA EQESNKY+FVVANAK
Subjt:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK

Query:  FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
        FMLDEEEHFRELLFERLRYYA R+KEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
Subjt:  FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
XP_023533874.1 uncharacterized protein LOC111795592 [Cucurbita pepo subsp. pepo]9.5e-7593.29Show/hide
Query:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK
        MLGTVNLVMGSS+AAMLTSTQCT+MKSLASFRIGHHSHCR LSLPSGLPSASGFSSCFFASR SSP     AAVNDQIVSSDSADEQESNKYYFVVANAK
Subjt:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK

Query:  FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
        FMLDEEEHFRELLFERLRYYAER+KEQDFWLVIEPKFLERFPNIT+RLQRPAVALVSTNSTWIT
Subjt:  FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
TrEMBL top hitse value%identityAlignment
A0A6J1D8T3 uncharacterized protein LOC1110179734.5e-6278.57Show/hide
Query:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRG---SSPFNRAIAAVN-DQIVSSDSADEQESNKYYFVV
        MLGTVNLVMGSS+AAM+T  Q  A+KSLAS R  HH+HCR LSLP G  +ASG +SCF  SRG   SSPF+ AIAAVN +Q+VSSD AD+QE+NKYYF+V
Subjt:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRG---SSPFNRAIAAVN-DQIVSSDSADEQESNKYYFVV

Query:  ANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
        ANAKFMLDEEEHF+ELLFERLRYY ER+KEQDFWLVIEPKFLE+FPNITKRLQRPAVALVSTNSTWIT
Subjt:  ANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
A0A6J1FW50 uncharacterized protein LOC1114490352.2e-6179.76Show/hide
Query:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSS---PFNRAIAAVN-DQIVSSDSADEQESNKYYFVV
        MLGTVNLVMGSS+AAM T TQC A+KSLAS +IG H+HCR  SLP GL SASG S+ F + RGSS    FN AIAAVN DQIVSSDSAD++ESNKYYF+V
Subjt:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSS---PFNRAIAAVN-DQIVSSDSADEQESNKYYFVV

Query:  ANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
        ANAKFMLDEEEHF+ELLFERLR Y ER+KEQDFWLVIEPKFL++FPNITKRLQRPAVALVSTNSTWIT
Subjt:  ANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
A0A6J1G6K2 uncharacterized protein LOC1114512465.1e-8298.78Show/hide
Query:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK
        MLGTVNLVMGSS+AAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFN AIAAVNDQIVSSDSADEQESNKYYFVVANAK
Subjt:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK

Query:  FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
        FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
Subjt:  FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
A0A6J1JCP0 uncharacterized protein LOC1114845255.0e-6178.7Show/hide
Query:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSS----PFNRAIAAVN-DQIVSSDSADEQESNKYYFV
        MLGTVNLVMGSS+AAM T TQC A+KSLAS +IG H+HCR  SLP GL SASG SS F + RGSS     F  A+AAVN DQIVSSDSAD++ESNKYYF+
Subjt:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSS----PFNRAIAAVN-DQIVSSDSADEQESNKYYFV

Query:  VANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
        VANAKFMLDEEEHF+ELLFERLR Y ER+KEQDFWLVIEPKFL++FPNITKRLQRPAVALVSTNSTWIT
Subjt:  VANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
A0A6J1KY44 uncharacterized protein LOC1114997837.4e-7391.46Show/hide
Query:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK
        MLGT NLVMGSS+AAMLTSTQCTAMKSLASFRIGHHSHCR LSLPSGLPSASGFSSCFFASRGSSP     AAVNDQ+VSS SA EQESNKY+FVVANAK
Subjt:  MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAK

Query:  FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
        FMLDEEEHFRELLFERLRYYA R+KEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
Subjt:  FMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
SwissProt top hitse value%identityAlignment
P51204 Uncharacterized protein ycf542.3e-0741.56Show/hide
Query:  YYFVVANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLE-----RFPNITKRLQRPAVALVSTNSTWI
        YYF +A+  F+L EE    E+  ER+ YY   +KE DFWL+  PKFL      +F N+   +   A+A++STNS +I
Subjt:  YYFVVANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLE-----RFPNITKRLQRPAVALVSTNSTWI
P72777 Ycf54-like protein3.6e-0847.3Show/hide
Query:  YYFVVANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPA--VALVSTNSTWI
        YY+ +A+ KF+L EEE F E+L ER R Y E++KE DFW VI+P FL        + + P   VA+VSTN ++I
Subjt:  YYFVVANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPA--VALVSTNSTWI
Q1XDT3 Uncharacterized protein ycf549.8e-0639.19Show/hide
Query:  YYFVVANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKR--LQRPAVALVSTNSTWI
        YYF +A+  F+L  +E   E+  ER+ YY   +K  DFWL+  P FLE+   I+ +  + + AVA++STN  +I
Subjt:  YYFVVANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKR--LQRPAVALVSTNSTWI
Arabidopsis top hitse value%identityAlignment
AT5G58250.1 unknown protein3.4e-3052.2Show/hide
Query:  VMGSSTAAM-LTSTQCTAMKSLASFRIGHHSHCRPLSLPS-GLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAKFMLDE
        V G+ T A+  T+  C     L S      +    LS PS  LPS          S  SS F  A  ++  Q     S ++ ES KY+F+VANAKFMLDE
Subjt:  VMGSSTAAM-LTSTQCTAMKSLASFRIGHHSHCRPLSLPS-GLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAKFMLDE

Query:  EEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
        EEHF+E LFERLRY+ ER   QDFWLVIEPKFL+ FP IT+RL+RPAVALVSTN TWIT
Subjt:  EEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGGCACTGTGAATCTAGTTATGGGCTCTTCTACAGCCGCCATGCTTACTTCAACGCAGTGTACTGCTATGAAGTCTCTTGCGAGTTTCAGGATTGGTCACCATAG
CCACTGCCGACCACTTTCACTGCCTTCGGGATTACCGTCTGCTTCTGGTTTTAGCTCCTGCTTCTTCGCTTCAAGAGGTTCTTCGCCGTTCAACAGAGCAATCGCCGCCG
TTAACGATCAAATAGTGTCCTCTGATTCGGCAGACGAGCAAGAATCGAACAAGTACTATTTTGTAGTTGCAAATGCGAAGTTCATGCTCGATGAGGAGGAGCATTTCAGG
GAGCTTCTCTTCGAGCGGCTTCGCTACTATGCCGAGCGTAGCAAGGAGCAGGACTTTTGGTTGGTGATTGAGCCTAAATTCTTGGAAAGGTTTCCTAATATCACCAAGAG
ATTGCAGAGACCTGCGGTTGCTCTTGTTTCAACCAATAGTACCTGGATCACGTAA
mRNA sequenceShow/hide mRNA sequence
AGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGCAATTCGCCAAATGTTAGGCACTGTGAATCTAGTTATGGGCTCTTCTACAGCCGCCATGCTTACTTCAACGC
AGTGTACTGCTATGAAGTCTCTTGCGAGTTTCAGGATTGGTCACCATAGCCACTGCCGACCACTTTCACTGCCTTCGGGATTACCGTCTGCTTCTGGTTTTAGCTCCTGC
TTCTTCGCTTCAAGAGGTTCTTCGCCGTTCAACAGAGCAATCGCCGCCGTTAACGATCAAATAGTGTCCTCTGATTCGGCAGACGAGCAAGAATCGAACAAGTACTATTT
TGTAGTTGCAAATGCGAAGTTCATGCTCGATGAGGAGGAGCATTTCAGGGAGCTTCTCTTCGAGCGGCTTCGCTACTATGCCGAGCGTAGCAAGGAGCAGGACTTTTGGT
TGGTGATTGAGCCTAAATTCTTGGAAAGGTTTCCTAATATCACCAAGAGATTGCAGAGACCTGCGGTTGCTCTTGTTTCAACCAATAGTACCTGGATCACGTAAGCTACC
TGTTTTCATTTTGCATTATTCACCCTGCTTTGCAATATTGCATTATAAATAAAGGGCGTGGATCCAAAACTACAACCTTAGTTAGGAATAGGGGCATAAACACTAATGTC
TAACAACTTGAATTATGCACTGCTCATTGGCTCGGATACTTTATCATGGAAACTTCGATCATCTTGAGGCCTAATAGATTACAAAAAAAAGAAGATGCTACATGTGAGAT
CCCACATCGGTTAAGGAGGAGAACAAAGCTTCACTCCCTAGCAGACGGTTTTAAAAACCTTGAGAGAAACTCGAAAGGGAAAGTTCAAAGAGGACAATATCGGCTAGCAG
TGGGCTTGAGTTATTACAAATGATATTAGAGTTAGACACTAGAAA
Protein sequenceShow/hide protein sequence
MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFR
ELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT