; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg11762 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11762
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLate embryogenesis abundant protein
Genome locationCarg_Chr10:6986987..6987565
RNA-Seq ExpressionCarg11762
SyntenyCarg11762
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010478.1 hypothetical protein SDJN02_27272, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-6273.4Show/hide
Query:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE
        MAA +RK R+ICI VLLS+ LL+I ILILAFT FKPK+PTI VDS+SLLDLNISLDAAR  VDLNL+L++ L+VENPNKVAF++S  TAVVSYRGEE+ E
Subjt:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE

Query:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKY
        APIP+G L AD TEKMNLTLTMMADRLLAKSEL SD ++GE+PI+ F RL G V VIGVFKI VVA SSCDLTI I  R++EDQ+C Y
Subjt:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKY

XP_022948127.1 uncharacterized protein LOC111451800 [Cucurbita moschata]4.1e-93100Show/hide
Query:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE
        MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE
Subjt:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE

Query:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL
        APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL
Subjt:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL

XP_023007254.1 uncharacterized protein LOC111499794 [Cucurbita maxima]9.1e-8592.19Show/hide
Query:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE
        MAALNRKRRNICIAVLLSLI+LVI ILILAFTVFKPKQPTITVDS+SLLDLNISL+AARF VDLNLTLIV LTVENPNKVAFQHSDGTAVVSYRGEEVAE
Subjt:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE

Query:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL
        APIPSGRLS DGTEKMNLTLTMMADRLLAKSEL SDV+AGELPISTFARL GK+ VIGVFKIRVVALSSCDLTIDIR R+VEDQRC+YRTKL
Subjt:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL

XP_023512272.1 uncharacterized protein LOC111777064 [Cucurbita pepo subsp. pepo]1.7e-6273.4Show/hide
Query:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE
        MAA +RK R+ICI VLLS+ LLVI ILILAFT FKPK+PTI VDS+SLLDLNISLDAAR  VDLNL+L++ L+VENPNKVAF++S  TAVVSYRGEE+ E
Subjt:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE

Query:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKY
        APIP+GRL AD TEKMNLTLTMMADRLLAKSEL SD ++GE+PI+ F RL G V VIGVFKI VVA SSCD TI I  R+++DQ+C Y
Subjt:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKY

XP_023534551.1 uncharacterized protein LOC111796093 [Cucurbita pepo subsp. pepo]2.8e-8693.75Show/hide
Query:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE
        MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISL+AARF VDLNLTLIV LT+ENPNKVAFQHSDGTAVVSYRGEEVAE
Subjt:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE

Query:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL
        APIPSGRLSADGTEKMNLTLTMMADR+LAKSEL SDVL GELPISTFARL GKV VIGVFKIRVVALSSCDLTI+IR RNVEDQRC+YRTKL
Subjt:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL

TrEMBL top hitse value%identityAlignment
A0A0A0KBX8 LEA_2 domain-containing protein1.2e-5365.57Show/hide
Query:  NICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLS
        NIC+ + LSLILL++F LILAFTVFKPKQP I VDS+SLLDLN+S+      V L+L+L V LTV+NPNKV F++S+ TAVV YRGE+V EAPIP GRL 
Subjt:  NICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLS

Query:  ADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL
          GTEKMNLTLT+M DR+L KSE+ SDV++G+LPISTFARLPGKV V+ V KI VVA +SCDL ID++  +  DQ C+YRT L
Subjt:  ADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL

A0A6J1FYG9 uncharacterized protein LOC1114486492.4e-6272.87Show/hide
Query:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE
        MAA +RK R+ICI VLLS+ LL+I ILILAFT FKPK+PTI VDS+SLLDLNISLDAAR  VDLNL+L++ L++ENPNKVAF++S  TAVVSYRGEE+ E
Subjt:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE

Query:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKY
        APIP+G L AD TEKMNLTLTMMADRLLAKSEL SD ++GE+PI+ F RL G V VIGVFKI VVA SSCDLTI I  R++EDQ+C Y
Subjt:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKY

A0A6J1G8C1 uncharacterized protein LOC1114518002.0e-93100Show/hide
Query:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE
        MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE
Subjt:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE

Query:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL
        APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL
Subjt:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL

A0A6J1JFV2 uncharacterized protein LOC1114840291.2e-6172.87Show/hide
Query:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE
        M A +RK R+ICI VLLS+ LLVI ILILAFT FKPK+PTI VDS+SLLDLNISLDAAR  VDLNL L++ L+VENPNKVAF++S  TAVVSYRGEE+ E
Subjt:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE

Query:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKY
         PIP+GRL AD TEKMNLTL MMADRLLAKSEL SD ++GE+PI+ F RL G V VIGVFKI VVA SSCDLTI I  R++EDQ+C Y
Subjt:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKY

A0A6J1L4F9 uncharacterized protein LOC1114997944.4e-8592.19Show/hide
Query:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE
        MAALNRKRRNICIAVLLSLI+LVI ILILAFTVFKPKQPTITVDS+SLLDLNISL+AARF VDLNLTLIV LTVENPNKVAFQHSDGTAVVSYRGEEVAE
Subjt:  MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAE

Query:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL
        APIPSGRLS DGTEKMNLTLTMMADRLLAKSEL SDV+AGELPISTFARL GK+ VIGVFKIRVVALSSCDLTIDIR R+VEDQRC+YRTKL
Subjt:  APIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64450.1 Glycine-rich protein family1.5e-0829.58Show/hide
Query:  CIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSAD
        C    + L++L++ +L++ FTVFKPK P I+V+++ L    +S + A      N +    + V NPN+  F H D +  + Y G +V    IP+G++ + 
Subjt:  CIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSAD

Query:  GTEKMNLTLTMMADRLL-AKSELLSDVLAGELPISTFARLPG
          + M  T T+ +  +    S  +S V A  +P S    +PG
Subjt:  GTEKMNLTLTMMADRLL-AKSELLSDVLAGELPISTFARLPG

AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family7.3e-1628.42Show/hide
Query:  NRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFR-VDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPI
        +R R    I V  + ++L   +L L FTVF+ K P I ++ + +  L+      + + +  N+++IV ++V+NPN  +F++S+ T  + Y+G  V EA  
Subjt:  NRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFR-VDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPI

Query:  PSGRLSADGTEKMNLTLTMMADRLLAKSELLSDV-LAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL
          G+     T +MN+T+ +M DR+L+   L  ++  +G + + ++ R+ GKV ++G+ K  V    +C + ++I  + ++D  CK +  L
Subjt:  PSGRLSADGTEKMNLTLTMMADRLLAKSELLSDV-LAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL

AT3G05975.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family1.7e-2037.11Show/hide
Query:  KRRNICIAVLLSLILLVIFI--LILAFTVFKPKQPTI-----TVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVA
        KRR  CI   +  +L VIF+  LILA  VFKPK P +     TVD +S    NISL    + V LN TL + + ++NPN   F++     +V YR   V 
Subjt:  KRRNICIAVLLSLILLVIFI--LILAFTVFKPKQPTI-----TVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVA

Query:  EAPIPSGRLSADGTEKMNLTLTMMADRLLAK-SELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL
           +PS  L A G+  +   L +  D+ +A   +++ DVL G++ + T A++PGK+ ++G+FKI + ++S C+L +      VEDQ C  +TKL
Subjt:  EAPIPSGRLSADGTEKMNLTLTMMADRLLAK-SELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL

AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family5.8e-4550.26Show/hide
Query:  LNRKRR-NICIAVLLSLILLV-IFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEA
        L RKR   ICI   + LILL+ I I+ILAFT+FKPK+PT T+DS+++  L  S++    +V LNLTL V L+++NPN++ F +   +A+++YRG+ + EA
Subjt:  LNRKRR-NICIAVLLSLILLV-IFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEA

Query:  PIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL
        P+P+ R++A  T  +N+TLT+MADRLL++++LLSDV+AG +P++TF ++ GKV V+ +FKI+V + SSCDL+I +  RNV  Q CKY TKL
Subjt:  PIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL

AT4G23930.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family4.6e-1025.14Show/hide
Query:  CIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSAD
        C    L ++ L+I  L +  TVF+P+ P I+V S+ +   +++  +  F      T      V NPN+ AF H +    + Y G  +    +P+G + + 
Subjt:  CIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSAD

Query:  GTEKMNLTLTMMADRLLAKSELL--------SDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRC
         T++M  T ++ +  L A S           SD     + I +   + G+V V+G+F  R+ A  +C + I     ++   RC
Subjt:  GTEKMNLTLTMMADRLLAKSELL--------SDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTCTCAATCGGAAGCGACGGAACATTTGCATAGCCGTATTACTTTCCCTAATCCTGCTCGTAATCTTCATCCTCATCTTAGCATTTACAGTTTTCAAGCCCAA
GCAGCCCACCATCACCGTCGATTCACTTTCTTTGCTCGATCTCAACATTTCTCTGGACGCTGCGAGGTTCCGCGTCGATCTGAATTTGACTCTGATTGTGCTACTCACCG
TCGAGAATCCGAATAAGGTAGCCTTCCAACACTCCGATGGCACCGCCGTCGTGAGTTACAGAGGCGAAGAAGTCGCAGAAGCGCCGATTCCGTCTGGTCGGTTATCGGCC
GACGGGACAGAGAAAATGAACCTAACGCTGACGATGATGGCGGACCGGCTACTAGCCAAGTCGGAGCTGTTATCCGATGTGCTCGCCGGTGAACTTCCGATCAGCACTTT
CGCTCGGCTGCCCGGGAAAGTGATGGTGATCGGTGTTTTCAAGATTCGTGTTGTGGCATTGTCGTCTTGTGATCTCACCATCGACATTAGAAAGAGAAACGTTGAGGATC
AGCGATGCAAATATCGGACTAAGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCTCTCAATCGGAAGCGACGGAACATTTGCATAGCCGTATTACTTTCCCTAATCCTGCTCGTAATCTTCATCCTCATCTTAGCATTTACAGTTTTCAAGCCCAA
GCAGCCCACCATCACCGTCGATTCACTTTCTTTGCTCGATCTCAACATTTCTCTGGACGCTGCGAGGTTCCGCGTCGATCTGAATTTGACTCTGATTGTGCTACTCACCG
TCGAGAATCCGAATAAGGTAGCCTTCCAACACTCCGATGGCACCGCCGTCGTGAGTTACAGAGGCGAAGAAGTCGCAGAAGCGCCGATTCCGTCTGGTCGGTTATCGGCC
GACGGGACAGAGAAAATGAACCTAACGCTGACGATGATGGCGGACCGGCTACTAGCCAAGTCGGAGCTGTTATCCGATGTGCTCGCCGGTGAACTTCCGATCAGCACTTT
CGCTCGGCTGCCCGGGAAAGTGATGGTGATCGGTGTTTTCAAGATTCGTGTTGTGGCATTGTCGTCTTGTGATCTCACCATCGACATTAGAAAGAGAAACGTTGAGGATC
AGCGATGCAAATATCGGACTAAGCTCTAA
Protein sequenceShow/hide protein sequence
MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSA
DGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL