; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg11764 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11764
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBiogenesis of lysosome-related organelles complex 1 subunit 1
Genome locationCarg_Chr10:6992372..6998064
RNA-Seq ExpressionCarg11764
SyntenyCarg11764
Gene Ontology termsGO:0051641 - cellular localization (biological process)
GO:0031083 - BLOC-1 complex (cellular component)
InterPro domainsIPR009395 - Biogenesis of lysosome-related organelles complex 1 subunit 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605390.1 WRKY transcription factor WRKY24, partial [Cucurbita argyrosperma subsp. sororia]1.1e-69100Show/hide
Query:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFD
        STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFD
Subjt:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFD

XP_008463815.1 PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis melo]7.4e-6989.68Show/hide
Query:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M S  GQSR  LP P NRGKFQS+ ERLSADVGGLE SL QMV+DHQYASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_022948128.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschata]7.9e-79100Show/hide
Query:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_023007259.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita maxima]6.2e-7697.42Show/hide
Query:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNSPSGQSRQH PA RNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKA+RVSDLLVDAVNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_023534753.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo subsp. pepo]3.9e-7899.35Show/hide
Query:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLE SLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

TrEMBL top hitse value%identityAlignment
A0A1S3CKJ9 Biogenesis of lysosome-related organelles complex 1 subunit 13.6e-6989.68Show/hide
Query:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M S  GQSR  LP P NRGKFQS+ ERLSADVGGLE SL QMV+DHQYASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A5A7V238 Biogenesis of lysosome-related organelles complex 1 subunit 12.6e-5176Show/hide
Query:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M S  GQSR  LP P NRGKFQS+ ERLSADVGGLE SL QMV+DHQYASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIH
        +TTI RF KQTDQWLAATHALNTAVK  G  +  +  +  +  SI   +H
Subjt:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIH

A0A6J1D9F5 Biogenesis of lysosome-related organelles complex 1 subunit 13.7e-6684.52Show/hide
Query:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M+SPSG SR HLP  RNRG  QSE ERLS++ GGLEASL QMV+DHQ+ASLKLR++SEKAKKDAIQKAVRVSDLLV AVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        + TI+RFMKQTDQWL  THALNTA+KEIGDFENWIKTIDFDCKSIT AIHNIYQD
Subjt:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A6J1G8I4 Biogenesis of lysosome-related organelles complex 1 subunit 13.8e-79100Show/hide
Query:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A6J1L4G4 Biogenesis of lysosome-related organelles complex 1 subunit 13.0e-7697.42Show/hide
Query:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNSPSGQSRQH PA RNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKA+RVSDLLVDAVNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

SwissProt top hitse value%identityAlignment
O22929 Biogenesis of lysosome-related organelles complex 1 subunit 19.8e-4054.84Show/hide
Query:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MN+P       L A R R     E E+   +   LE+SL Q+++D++ +SL+LRE +E+++K+AI+ A R +DLLV AVNGGV+E FVN+K IE EIR L
Subjt:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        + T+ +F KQTDQWLA THA+N+AVKEIGDFENW+KT++FDCK IT AI NI++D
Subjt:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

P78537 Biogenesis of lysosome-related organelles complex 1 subunit 11.6e-1833.33Show/hide
Query:  APRNRGKFQSEAERLSADVGGLE---ASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQ
        AP +RG+  S   R    V   +     L +++ +HQ    + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++ L     +F KQ
Subjt:  APRNRGKFQSEAERLSADVGGLE---ASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQ

Query:  TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ
        T QW+      N A+KEIGD ENW ++I+ D ++I TA+  +Y+
Subjt:  TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ

Q0VFD8 Biogenesis of lysosome-related organelles complex 1 subunit 18.6e-2038.79Show/hide
Query:  LFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +HQ    + +E  EK +KDAI  A  +++ LVD +N GV +++VNQ+ ++ E++ L T   +F KQT QW++     N A+KEIGD ENW ++I
Subjt:  LFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D + I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Q2NKW0 Biogenesis of lysosome-related organelles complex 1 subunit 13.6e-1835.34Show/hide
Query:  LFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +HQ    + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++ L     +F KQT QW+      N A+KEIGD ENW ++I
Subjt:  LFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D ++I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Q5R7L8 Biogenesis of lysosome-related organelles complex 1 subunit 11.6e-1833.33Show/hide
Query:  APRNRGKFQSEAERLSADVGGLE---ASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQ
        AP +RG+  S   R    V   +     L +++ +HQ    + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++ L     +F KQ
Subjt:  APRNRGKFQSEAERLSADVGGLE---ASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQ

Query:  TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ
        T QW+      N A+KEIGD ENW ++I+ D ++I TA+  +Y+
Subjt:  TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ

Arabidopsis top hitse value%identityAlignment
AT2G30330.1 GCN5L1 family protein6.9e-4154.84Show/hide
Query:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MN+P       L A R R     E E+   +   LE+SL Q+++D++ +SL+LRE +E+++K+AI+ A R +DLLV AVNGGV+E FVN+K IE EIR L
Subjt:  MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        + T+ +F KQTDQWLA THA+N+AVKEIGDFENW+KT++FDCK IT AI NI++D
Subjt:  STTITRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTCCGTCAGGGCAATCACGGCAGCACCTCCCTGCACCGCGTAATCGCGGGAAGTTCCAATCGGAGGCGGAGAGATTGAGCGCCGACGTTGGAGGACTCGAAGC
TTCATTGTTTCAGATGGTAAATGATCACCAGTACGCCTCTCTCAAGCTCCGAGAGAACTCCGAGAAGGCGAAGAAAGATGCTATTCAGAAGGCGGTGCGCGTTTCGGATC
TCTTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTATCGACCACGATTACCCGATTTATGAAGCAG
ACCGATCAATGGCTCGCCGCCACTCACGCTCTGAACACTGCTGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATAGATTTCGATTGTAAGAGCATCACTAC
TGCCATCCATAACATTTACCAAGACTGA
mRNA sequenceShow/hide mRNA sequence
AGAATATTTCACCAGCCGAACATGAATTCTCCGTCAGGGCAATCACGGCAGCACCTCCCTGCACCGCGTAATCGCGGGAAGTTCCAATCGGAGGCGGAGAGATTGAGCGC
CGACGTTGGAGGACTCGAAGCTTCATTGTTTCAGATGGTAAATGATCACCAGTACGCCTCTCTCAAGCTCCGAGAGAACTCCGAGAAGGCGAAGAAAGATGCTATTCAGA
AGGCGGTGCGCGTTTCGGATCTCTTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTATCGACCACG
ATTACCCGATTTATGAAGCAGACCGATCAATGGCTCGCCGCCACTCACGCTCTGAACACTGCTGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATAGATTT
CGATTGTAAGAGCATCACTACTGCCATCCATAACATTTACCAAGACTGAAGTACTCGTCGCGAAAGAGTTAACTGTCCTTTCCTTCACCGAGCTCATTCCGGTGCAGCAT
ATCCAGATGGAAACTCCTGTAGAAACTTGGAGCACCTCAGTACCCAACTTGGCTGCTACCTCACTAACTCTGTTTTGGAGTTTGGTTCTTCACTTGGGAAGCATCAAAAT
ACTATTGCTTTTGGGTGATGATGGATATCAAGAAATGCATGAAAATGATGATGGTCGAAACAGGAGCCCTTTCTTGCTTTTAACCGAGTGCATACATTGAGTTGGAACTG
TTTTATCTAATACTAGTATGTGCGGCAAGTACTTCTGCCTCATTCTGTTCCTGAATGGGAGGTATGCTTGGCCCCTTGTTACATTACCTTTTTCTATGCTTATGGTTTGA
GACATCAAGCCGCATCACCTTCTCTTCGATAATAAAGGAGA
Protein sequenceShow/hide protein sequence
MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQ
TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD