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Carg11770 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11770
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionV-type proton ATPase subunit a
Genome locationCarg_Chr05:1217410..1218821
RNA-Seq ExpressionCarg11770
SyntenyCarg11770
Gene Ontology termsGO:1902600 - proton transmembrane transport (biological process)
GO:0000220 - vacuolar proton-transporting V-type ATPase, V0 domain (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domainsIPR002490 - V-type ATPase, V0 complex, 116kDa subunit family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598477.1 V-type proton ATPase subunit a3, partial [Cucurbita argyrosperma subsp. sororia]7.2e-2090Show/hide
Query:  SKWGDLISVMPKANSELQGRVYSIVTFPFLFAVVFSDFHGICLLLATLYLIIREKNFSSQ
        S    L++VMPKANSELQGRVYSIVTFPFLFAVVFSDFHGICLLLATLYLIIREKNFSSQ
Subjt:  SKWGDLISVMPKANSELQGRVYSIVTFPFLFAVVFSDFHGICLLLATLYLIIREKNFSSQ

KAG7029413.1 V-type proton ATPase subunit a2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-94100Show/hide
Query:  MIFHQFYISFLCLALAVVERVSSRNLIAYFIFRKAKELYKNWNGRNVQDREHICLYISFDFWVPSEVQGTKFNRCLYCAYGKSSTNSKWGDLISVMPKAN
        MIFHQFYISFLCLALAVVERVSSRNLIAYFIFRKAKELYKNWNGRNVQDREHICLYISFDFWVPSEVQGTKFNRCLYCAYGKSSTNSKWGDLISVMPKAN
Subjt:  MIFHQFYISFLCLALAVVERVSSRNLIAYFIFRKAKELYKNWNGRNVQDREHICLYISFDFWVPSEVQGTKFNRCLYCAYGKSSTNSKWGDLISVMPKAN

Query:  SELQGRVYSIVTFPFLFAVVFSDFHGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYTTDL
        SELQGRVYSIVTFPFLFAVVFSDFHGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYTTDL
Subjt:  SELQGRVYSIVTFPFLFAVVFSDFHGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYTTDL

XP_028765609.1 V-type proton ATPase subunit a3-like [Prosopis alba]5.7e-1777.61Show/hide
Query:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT
        VY+I+TFPFLFAV+F D+ HGICLLLATLYLIIREK FS+QK  DI E+TFG RYVI MMAL SIYT
Subjt:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT

XP_038716594.1 V-type proton ATPase subunit a3-like [Tripterygium wilfordii]1.1e-1779.1Show/hide
Query:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT
        VY+I+TFPFLFAV+F D+ HGICLLLATLYLIIREK FSSQK  DI E+TFG RYVI MMAL SIYT
Subjt:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT

XP_038884967.1 V-type proton ATPase subunit a2-like isoform X3 [Benincasa hispida]5.7e-1779.1Show/hide
Query:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT
        VY+IVTFPFLFAV+F D+ HGICLLLATLY IIREK FSSQK  DI E+TFG RYVI MMAL SIYT
Subjt:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT

TrEMBL top hitse value%identityAlignment
A0A2P5WIJ5 V-type proton ATPase subunit a2.7e-1760Show/hide
Query:  AYGKSSTNSKWGDLISVMPKANSELQGRVYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT
        AYG  +  S  G  +  + K      G VY+IVTFPFLFAV+F D+ HGICLLLATLY I+REK  SSQK  DI E+TFG RYVI MM+L SIYT
Subjt:  AYGKSSTNSKWGDLISVMPKANSELQGRVYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT

A0A314UM14 V-type proton ATPase subunit a6.1e-1777.61Show/hide
Query:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT
        VY+IVTFPFLFAV+F D+ HGICLLLATLY IIRE+ FSSQK  DI E+TFG RYVI MMAL SIYT
Subjt:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT

A0A6J1GGT7 V-type proton ATPase subunit a4.7e-1779.1Show/hide
Query:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT
        VY+IVTFPFLFAV+F D+ HGICLLLATLYLIIREK FSSQK  DI E+TF  RYVI MMAL SIYT
Subjt:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT

A0A6J1KIY1 V-type proton ATPase subunit a4.7e-1779.1Show/hide
Query:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT
        VY+IVTFPFLFAV+F D+ HGICLLLATLYLIIREK FSSQK  DI E+TF  RYVI MMAL SIYT
Subjt:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT

A0A7J7D389 V-type proton ATPase subunit a5.5e-1879.1Show/hide
Query:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT
        VY+I+TFPFLFAV+F D+ HGICLLLATLYLIIREK FSSQK  DI E+TFG RYVI MMAL SIYT
Subjt:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT

SwissProt top hitse value%identityAlignment
P25286 V-type proton ATPase 116 kDa subunit a11.6e-0943.84Show/hide
Query:  ELQGRVYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKH-RDINEITFGTRYVIKMMALLSIYT
        E+    Y+++TFPFLFAV+F DF HGI + L  +++++RE    SQK+  ++  + F  RY+I +M L SIYT
Subjt:  ELQGRVYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKH-RDINEITFGTRYVIKMMALLSIYT

Q8RWZ7 V-type proton ATPase subunit a12.7e-1457.75Show/hide
Query:  ELQGRVYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIY
        E    VYS+VT+PFLFAV+F D+ HG+CLLL  LYL+ RE+  S+QK     E+ FG RYVI +MAL SIY
Subjt:  ELQGRVYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIY

Q8W4S4 V-type proton ATPase subunit a37.7e-1767.16Show/hide
Query:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT
        V++IVTFPFLFAV+F D+ HGIC+LLAT+YLI++EK  +SQK  DI E+ FG RYVI MM+L SIYT
Subjt:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT

Q9SJT7 V-type proton ATPase subunit a25.3e-1868.06Show/hide
Query:  ELQGRVYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT
        E    V++IVTFPFLFAV+F D+ HGICLLLAT+YLI+REK  SSQK  DI E+ FG RYVI MM+L SIYT
Subjt:  ELQGRVYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT

Q9Z1G4 V-type proton ATPase 116 kDa subunit a12.4e-1045.21Show/hide
Query:  ELQGRVYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKH-RDINEITFGTRYVIKMMALLSIYT
        E+    Y+++TFPFLFAV+F DF HGI + L  +++++RE    SQKH  ++  + F  RY+I +M L SIYT
Subjt:  ELQGRVYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKH-RDINEITFGTRYVIKMMALLSIYT

Arabidopsis top hitse value%identityAlignment
AT2G21410.1 vacuolar proton ATPase A23.8e-1968.06Show/hide
Query:  ELQGRVYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT
        E    V++IVTFPFLFAV+F D+ HGICLLLAT+YLI+REK  SSQK  DI E+ FG RYVI MM+L SIYT
Subjt:  ELQGRVYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT

AT2G28520.1 vacuolar proton ATPase A11.9e-1557.75Show/hide
Query:  ELQGRVYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIY
        E    VYS+VT+PFLFAV+F D+ HG+CLLL  LYL+ RE+  S+QK     E+ FG RYVI +MAL SIY
Subjt:  ELQGRVYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIY

AT4G39080.1 vacuolar proton ATPase A35.5e-1867.16Show/hide
Query:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT
        V++IVTFPFLFAV+F D+ HGIC+LLAT+YLI++EK  +SQK  DI E+ FG RYVI MM+L SIYT
Subjt:  VYSIVTFPFLFAVVFSDF-HGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTTCCACCAATTCTACATTAGTTTCCTTTGCCTCGCTTTGGCAGTTGTTGAGAGAGTTTCTAGCAGGAATCTGATTGCATACTTTATTTTTAGGAAAGCGAAGGA
ATTATATAAGAATTGGAATGGTAGGAACGTACAAGATCGTGAGCACATCTGTCTGTATATAAGTTTTGACTTTTGGGTACCCAGTGAAGTGCAAGGGACAAAGTTTAATC
GTTGCCTATACTGTGCCTATGGAAAAAGTTCCACTAATTCAAAGTGGGGTGATTTGATATCGGTGATGCCGAAGGCAAATAGTGAATTGCAGGGTAGAGTCTACTCTATT
GTCACTTTCCCTTTCCTATTTGCTGTAGTGTTTAGTGATTTCCATGGAATATGCTTATTGCTGGCAACATTATATCTTATAATAAGGGAGAAGAATTTTTCCAGCCAGAA
ACATCGAGATATCAATGAAATTACTTTTGGGACCCGTTATGTTATCAAGATGATGGCACTTTTGTCGATCTACACGACTGATTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTTCCACCAATTCTACATTAGTTTCCTTTGCCTCGCTTTGGCAGTTGTTGAGAGAGTTTCTAGCAGGAATCTGATTGCATACTTTATTTTTAGGAAAGCGAAGGA
ATTATATAAGAATTGGAATGGTAGGAACGTACAAGATCGTGAGCACATCTGTCTGTATATAAGTTTTGACTTTTGGGTACCCAGTGAAGTGCAAGGGACAAAGTTTAATC
GTTGCCTATACTGTGCCTATGGAAAAAGTTCCACTAATTCAAAGTGGGGTGATTTGATATCGGTGATGCCGAAGGCAAATAGTGAATTGCAGGGTAGAGTCTACTCTATT
GTCACTTTCCCTTTCCTATTTGCTGTAGTGTTTAGTGATTTCCATGGAATATGCTTATTGCTGGCAACATTATATCTTATAATAAGGGAGAAGAATTTTTCCAGCCAGAA
ACATCGAGATATCAATGAAATTACTTTTGGGACCCGTTATGTTATCAAGATGATGGCACTTTTGTCGATCTACACGACTGATTTATAA
Protein sequenceShow/hide protein sequence
MIFHQFYISFLCLALAVVERVSSRNLIAYFIFRKAKELYKNWNGRNVQDREHICLYISFDFWVPSEVQGTKFNRCLYCAYGKSSTNSKWGDLISVMPKANSELQGRVYSI
VTFPFLFAVVFSDFHGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYTTDL