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Carg11772 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11772
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionV-type proton ATPase subunit a
Genome locationCarg_Chr05:1215524..1216459
RNA-Seq ExpressionCarg11772
SyntenyCarg11772
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5386859.1 hypothetical protein IGI04_038329 [Brassica rapa subsp. trilocularis]9.6e-0734.11Show/hide
Query:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEF----------------LSVFYDKFDHPNGVGIAIF----------HLCNCRSFTSS---KRFPARLG
        +FV GAVS TAS+LRLWALR K L L++   E                 + V   +   P GVG   +          HLCN  S +     +R P+R  
Subjt:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEF----------------LSVFYDKFDHPNGVGIAIF----------HLCNCRSFTSS---KRFPARLG

Query:  APLGGVSEEIIYNRWIQISPFSFSLHREK
        + LGGVSE+++  RW+Q+    F   R++
Subjt:  APLGGVSEEIIYNRWIQISPFSFSLHREK

KAG7029411.1 hypothetical protein SDJN02_07750, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-75100Show/hide
Query:  MLDLIFARGTKVNPTPYFTAQTTILKWNDATVPTATRSSKFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDKFDHPNGVGIAIFHLCNCRSFT
        MLDLIFARGTKVNPTPYFTAQTTILKWNDATVPTATRSSKFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDKFDHPNGVGIAIFHLCNCRSFT
Subjt:  MLDLIFARGTKVNPTPYFTAQTTILKWNDATVPTATRSSKFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDKFDHPNGVGIAIFHLCNCRSFT

Query:  SSKRFPARLGAPLGGVSEEIIYNRWIQISPFSFSLHREKDE
        SSKRFPARLGAPLGGVSEEIIYNRWIQISPFSFSLHREKDE
Subjt:  SSKRFPARLGAPLGGVSEEIIYNRWIQISPFSFSLHREKDE

VAI07686.1 unnamed protein product [Triticum turgidum subsp. durum]6.2e-0643.16Show/hide
Query:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK----------FDHPNGVGIAIFHLCNCR---SFTSSKRFPARLGAPLGGVSEEII
        +FV GAVS TAS+LRLWA       LS AHSE  +VFYDK          + +P        HL +CR    +   K  P+RL APLGGV E+++
Subjt:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK----------FDHPNGVGIAIFHLCNCR---SFTSSKRFPARLGAPLGGVSEEII

XP_004152666.1 V-type proton ATPase subunit a2 isoform X1 [Cucumis sativus]3.4e-0442.11Show/hide
Query:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK-------FDH--PNGVGIAIFHLCNCRSFTSSKRFPARLGA-PLGGV--SEEIIYNRWIQ
        +FV GAVS TAS+LRLWA       LS AHSE  SVFYDK       FD      VG+A+F           +   A L A  L  V    +       +
Subjt:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK-------FDH--PNGVGIAIFHLCNCRSFTSSKRFPARLGA-PLGGV--SEEIIYNRWIQ

Query:  ISPFSFSLHREKDE
         SPFSFSL RE+DE
Subjt:  ISPFSFSLHREKDE

XP_031736421.1 V-type proton ATPase subunit a3 isoform X2 [Cucumis sativus]3.4e-0442.11Show/hide
Query:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK-------FDH--PNGVGIAIFHLCNCRSFTSSKRFPARLGA-PLGGV--SEEIIYNRWIQ
        +FV GAVS TAS+LRLWA       LS AHSE  SVFYDK       FD      VG+A+F           +   A L A  L  V    +       +
Subjt:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK-------FDH--PNGVGIAIFHLCNCRSFTSSKRFPARLGA-PLGGV--SEEIIYNRWIQ

Query:  ISPFSFSLHREKDE
         SPFSFSL RE+DE
Subjt:  ISPFSFSLHREKDE

TrEMBL top hitse value%identityAlignment
A0A0A0LLK1 V-type proton ATPase subunit a1.6e-0442.11Show/hide
Query:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK-------FDH--PNGVGIAIFHLCNCRSFTSSKRFPARLGA-PLGGV--SEEIIYNRWIQ
        +FV GAVS TAS+LRLWA       LS AHSE  SVFYDK       FD      VG+A+F           +   A L A  L  V    +       +
Subjt:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK-------FDH--PNGVGIAIFHLCNCRSFTSSKRFPARLGA-PLGGV--SEEIIYNRWIQ

Query:  ISPFSFSLHREKDE
         SPFSFSL RE+DE
Subjt:  ISPFSFSLHREKDE

A0A1S3BD13 V-type proton ATPase subunit a6.3e-0441.23Show/hide
Query:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK-------FDH--PNGVGIAIFHLCNCRSFTSSKRFPARLGA-PLGGV--SEEIIYNRWIQ
        +FV GAVS TAS+LRLWA       LS AHSE  SVFYDK       F+      VG+A+F           +   A L A  L  V    +       +
Subjt:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK-------FDH--PNGVGIAIFHLCNCRSFTSSKRFPARLGA-PLGGV--SEEIIYNRWIQ

Query:  ISPFSFSLHREKDE
         SPFSFSL RE+DE
Subjt:  ISPFSFSLHREKDE

A0A446S9D5 V-type proton ATPase subunit a3.0e-0643.16Show/hide
Query:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK----------FDHPNGVGIAIFHLCNCR---SFTSSKRFPARLGAPLGGVSEEII
        +FV GAVS TAS+LRLWA       LS AHSE  +VFYDK          + +P        HL +CR    +   K  P+RL APLGGV E+++
Subjt:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK----------FDHPNGVGIAIFHLCNCR---SFTSSKRFPARLGAPLGGVSEEII

A0A5A7VHH1 V-type proton ATPase subunit a6.3e-0441.23Show/hide
Query:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK-------FDH--PNGVGIAIFHLCNCRSFTSSKRFPARLGA-PLGGV--SEEIIYNRWIQ
        +FV GAVS TAS+LRLWA       LS AHSE  SVFYDK       F+      VG+A+F           +   A L A  L  V    +       +
Subjt:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK-------FDH--PNGVGIAIFHLCNCRSFTSSKRFPARLGA-PLGGV--SEEIIYNRWIQ

Query:  ISPFSFSLHREKDE
         SPFSFSL RE+DE
Subjt:  ISPFSFSLHREKDE

A0A6J1GGT7 V-type proton ATPase subunit a2.8e-0441.23Show/hide
Query:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK-------FD--HPNGVGIAIFHLCNCRSFTSSKRFPARLGA-PLGGV--SEEIIYNRWIQ
        +FV GAVS TAS+LRLWA       LS AHSE  SVFYDK       FD      +GIA+F           +   A L A  L  V    +       +
Subjt:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK-------FD--HPNGVGIAIFHLCNCRSFTSSKRFPARLGA-PLGGV--SEEIIYNRWIQ

Query:  ISPFSFSLHREKDE
         SP+SFSL RE+DE
Subjt:  ISPFSFSLHREKDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21410.1 vacuolar proton ATPase A27.3e-0562.5Show/hide
Query:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK
        +FV GAVS TAS+LRLWA       LS AHSE  SVFY+K
Subjt:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK

AT2G28520.1 vacuolar proton ATPase A12.8e-0457.14Show/hide
Query:  SSKFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK
        S +FV G+VS TAS+LRLWA       LS AHSE  +VFY+K
Subjt:  SSKFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK

AT4G39080.1 vacuolar proton ATPase A37.3e-0562.5Show/hide
Query:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK
        +FV GAVS TAS+LRLWA       LS AHSE  SVFY+K
Subjt:  KFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGATCTCATCTTTGCCAGAGGCACCAAGGTCAATCCTACTCCCTACTTCACAGCACAGACAACAATCTTGAAATGGAACGATGCCACGGTTCCCACGGCCACGAG
GAGTTCGAAGTTCGTACCTGGTGCAGTTTCTAAAACAGCATCCTTTCTACGTTTATGGGCCCTCAGGTCCAAATTTCTTTCACTCAGCCAAGCGCATTCGGAGTTCTTGA
GTGTATTTTACGACAAGTTTGATCATCCGAATGGTGTAGGAATAGCTATTTTTCATTTGTGCAACTGTCGGAGTTTTACTAGTTCTAAGCGCTTTCCTGCCCGCCTTGGG
GCTCCACTGGGTGGAGTTTCAGAAGAAATTATATACAACAGATGGATTCAAATTTCCCCCTTCTCGTTTTCGTTGCACCGGGAGAAGGATGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGATCTCATCTTTGCCAGAGGCACCAAGGTCAATCCTACTCCCTACTTCACAGCACAGACAACAATCTTGAAATGGAACGATGCCACGGTTCCCACGGCCACGAG
GAGTTCGAAGTTCGTACCTGGTGCAGTTTCTAAAACAGCATCCTTTCTACGTTTATGGGCCCTCAGGTCCAAATTTCTTTCACTCAGCCAAGCGCATTCGGAGTTCTTGA
GTGTATTTTACGACAAGTTTGATCATCCGAATGGTGTAGGAATAGCTATTTTTCATTTGTGCAACTGTCGGAGTTTTACTAGTTCTAAGCGCTTTCCTGCCCGCCTTGGG
GCTCCACTGGGTGGAGTTTCAGAAGAAATTATATACAACAGATGGATTCAAATTTCCCCCTTCTCGTTTTCGTTGCACCGGGAGAAGGATGAGTGA
Protein sequenceShow/hide protein sequence
MLDLIFARGTKVNPTPYFTAQTTILKWNDATVPTATRSSKFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDKFDHPNGVGIAIFHLCNCRSFTSSKRFPARLG
APLGGVSEEIIYNRWIQISPFSFSLHREKDE