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Carg11835 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11835
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUroporphyrinogen-III synthase
Genome locationCarg_Chr05:878875..880608
RNA-Seq ExpressionCarg11835
SyntenyCarg11835
Gene Ontology termsGO:0006780 - uroporphyrinogen III biosynthetic process (biological process)
GO:0006782 - protoporphyrinogen IX biosynthetic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0004852 - uroporphyrinogen-III synthase activity (molecular function)
InterPro domainsIPR003754 - Tetrapyrrole biosynthesis, uroporphyrinogen III synthase
IPR036108 - Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily
IPR039793 - Uroporphyrinogen-III synthase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598391.1 Uroporphyrinogen-III synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.2e-62100Show/hide
Query:  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS
        MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS
Subjt:  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS

Query:  VLSDSVFDWIIITSPEAGLVFLQAWK
        VLSDSVFDWIIITSPEAGLVFLQAWK
Subjt:  VLSDSVFDWIIITSPEAGLVFLQAWK
KAG7029353.1 Uroporphyrinogen-III synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-62100Show/hide
Query:  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS
        MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS
Subjt:  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS

Query:  VLSDSVFDWIIITSPEAGLVFLQAWK
        VLSDSVFDWIIITSPEAGLVFLQAWK
Subjt:  VLSDSVFDWIIITSPEAGLVFLQAWK
XP_022962039.1 uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita moschata]4.2e-62100Show/hide
Query:  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS
        MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS
Subjt:  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS

Query:  VLSDSVFDWIIITSPEAGLVFLQAWK
        VLSDSVFDWIIITSPEAGLVFLQAWK
Subjt:  VLSDSVFDWIIITSPEAGLVFLQAWK
XP_022996969.1 uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita maxima]4.2e-62100Show/hide
Query:  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS
        MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS
Subjt:  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS

Query:  VLSDSVFDWIIITSPEAGLVFLQAWK
        VLSDSVFDWIIITSPEAGLVFLQAWK
Subjt:  VLSDSVFDWIIITSPEAGLVFLQAWK
XP_023547155.1 uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]3.0e-6098.41Show/hide
Query:  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS
        MAPVSLSSFS TPSVV SPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS
Subjt:  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS

Query:  VLSDSVFDWIIITSPEAGLVFLQAWK
        VLSDSVFDWIIITSPEAGLVFLQAWK
Subjt:  VLSDSVFDWIIITSPEAGLVFLQAWK
TrEMBL top hitse value%identityAlignment
A0A0A0LLB2 Uroporphyrinogen-III synthase1.4e-5087.5Show/hide
Query:  MAPVSLSSFSHTPS-VVPSPCLLQLYRRILLPRRTLACFSSTLTSSASIT-SSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRL
        MA VSLSSFSH PS VVPSPC LQ Y RILLPRRTLAC SST  SS+SIT SSSISAPKVVVTRERGKNGKL++ALARHGINCLELPLIQH QGPDLNRL
Subjt:  MAPVSLSSFSHTPS-VVPSPCLLQLYRRILLPRRTLACFSSTLTSSASIT-SSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRL

Query:  HSVLSDSVFDWIIITSPEAGLVFLQAWK
        HSVLSDSVFDWI+ITSPEAGLVFL+AWK
Subjt:  HSVLSDSVFDWIIITSPEAGLVFLQAWK
A0A1S3BBN0 Uroporphyrinogen-III synthase5.7e-4984.5Show/hide
Query:  MAPVSLSSFSHTPS-VVPSPCLLQLYRRILLPRRTLACFSST--LTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNR
        MA VSLSSFSH PS VVPSPC LQ YRRILLPRRTLAC SS    +SS+SITS SISAPKVVVTRERGKNGKL++ALARHGINCLELPLIQH QGPDLNR
Subjt:  MAPVSLSSFSHTPS-VVPSPCLLQLYRRILLPRRTLACFSST--LTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNR

Query:  LHSVLSDSVFDWIIITSPEAGLVFLQAWK
        L SVLSD+VFDWI+ITSPEAGLVFL+AWK
Subjt:  LHSVLSDSVFDWIIITSPEAGLVFLQAWK
A0A6J1CQT7 Uroporphyrinogen-III synthase2.2e-4580.77Show/hide
Query:  MAPV---SLSSFSHTPS-VVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLN
        MAPV   SLSS SH PS VVPSPC LQL RRILLPRRT +C SS   +S   TSSSISAPKVVVTRERGKNGKL++ALA+HGINCLELPLIQH QGPDLN
Subjt:  MAPV---SLSSFSHTPS-VVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLN

Query:  RLHSVLSDSVFDWIIITSPEAGLVFLQAWK
        RLHSVL DSVFDWI+ITSPEAGLVFL+AWK
Subjt:  RLHSVLSDSVFDWIIITSPEAGLVFLQAWK
A0A6J1HDZ7 Uroporphyrinogen-III synthase2.0e-62100Show/hide
Query:  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS
        MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS
Subjt:  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS

Query:  VLSDSVFDWIIITSPEAGLVFLQAWK
        VLSDSVFDWIIITSPEAGLVFLQAWK
Subjt:  VLSDSVFDWIIITSPEAGLVFLQAWK
A0A6J1KA58 Uroporphyrinogen-III synthase2.0e-62100Show/hide
Query:  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS
        MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS
Subjt:  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHS

Query:  VLSDSVFDWIIITSPEAGLVFLQAWK
        VLSDSVFDWIIITSPEAGLVFLQAWK
Subjt:  VLSDSVFDWIIITSPEAGLVFLQAWK
SwissProt top hitse value%identityAlignment
O48721 Uroporphyrinogen-III synthase, chloroplastic5.9e-2768.18Show/hide
Query:  SSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLVFLQAWK
        SS+++SS+S  SSS S P+VVVTRERGKN ++I AL ++GI+ LELPLIQH++GPD +RL SVL+D  FDWIIITSPEAG VFL+AWK
Subjt:  SSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLVFLQAWK
Q10QR9 Uroporphyrinogen-III synthase, chloroplastic1.7e-2163.29Show/hide
Query:  ITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLVFLQAWK
        I  SS   P VVVTRERGKN KLI AL +H +  LELPLI+H +GPD +RL +VL D  FDWI ITSPEA  VFL+ WK
Subjt:  ITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLVFLQAWK
Arabidopsis top hitse value%identityAlignment
AT2G26540.1 uroporphyrinogen-III synthase family protein4.2e-2868.18Show/hide
Query:  SSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLVFLQAWK
        SS+++SS+S  SSS S P+VVVTRERGKN ++I AL ++GI+ LELPLIQH++GPD +RL SVL+D  FDWIIITSPEAG VFL+AWK
Subjt:  SSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLVFLQAWK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCAGTTTCTCTCTCTTCTTTCTCCCATACGCCTTCTGTTGTTCCTTCGCCTTGTCTACTACAGCTTTACCGGCGAATCTTACTTCCTCGCAGAACGCTTGCCTG
TTTCTCCTCCACTTTGACTTCTTCTGCTTCGATCACGTCTTCGTCAATTTCGGCGCCAAAAGTAGTGGTTACCAGAGAGCGCGGCAAGAACGGGAAGCTCATCGATGCTC
TGGCAAGACATGGAATAAACTGTTTGGAGCTTCCCCTCATTCAACACAGTCAAGGACCTGACTTGAATAGGTTACACTCTGTACTTAGTGATTCTGTATTTGATTGGATC
ATTATAACCTCCCCTGAAGCTGGCTTGGTGTTCCTACAGGCATGGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCAGTTTCTCTCTCTTCTTTCTCCCATACGCCTTCTGTTGTTCCTTCGCCTTGTCTACTACAGCTTTACCGGCGAATCTTACTTCCTCGCAGAACGCTTGCCTG
TTTCTCCTCCACTTTGACTTCTTCTGCTTCGATCACGTCTTCGTCAATTTCGGCGCCAAAAGTAGTGGTTACCAGAGAGCGCGGCAAGAACGGGAAGCTCATCGATGCTC
TGGCAAGACATGGAATAAACTGTTTGGAGCTTCCCCTCATTCAACACAGTCAAGGACCTGACTTGAATAGGTTACACTCTGTACTTAGTGATTCTGTATTTGATTGGATC
ATTATAACCTCCCCTGAAGCTGGCTTGGTGTTCCTACAGGCATGGAAGTAA
Protein sequenceShow/hide protein sequence
MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWI
IITSPEAGLVFLQAWK