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Carg11845 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11845
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCalcium-binding EF-hand
Genome locationCarg_Chr05:827661..827939
RNA-Seq ExpressionCarg11845
SyntenyCarg11845
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]4.1e-3585.71Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTL
        MGNSKSKTYKRVLVPFSEEQLA+VFKNHD DGDG LTKEELKQAF+YLGSRFS+FRVEEALRAAD +GDG ISM EM KLI+YAK+RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTL

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3583.7Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTLC
        MGNSKSKTYKRVLVP +EEQLA +FK+HD DGDGKLTKEELKQAF+YLGSRFSSFR +EALRAAD DGDG I+MAEM KLIQY K+RKYTLC
Subjt:  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTLC

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]6.0e-4297.83Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTLC
        MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAAD DGDGFISMAEM KLIQYAKSRKYTLC
Subjt:  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTLC

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-3480.43Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTLC
        MGN+KS  YKRVLVPF+EEQLA++FK+HD DGDGKL+KEELKQAF+YLGSRFSSFRV+EALRAAD +GDGFISM EM+KLI+Y K RKYTLC
Subjt:  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTLC

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-43100Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTLC
        MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTLC
Subjt:  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTLC

TrEMBL top hitse value%identityAlignment
A0A0A0LRB6 Uncharacterized protein1.0e-3484.62Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTL
        MGNSKSKTYKRVLVPFSEEQLA+VFKNHD DGDG LTKEELKQAF+YLGSRF +FRVEEALRAAD +GDG ISM EM KLI+YAK+RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTL

A0A2N9FYQ0 Uncharacterized protein1.7e-1850.57Show/hide
Query:  KSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTL
        K  ++KR  +PF+EEQL ++FK+HD DGDGKL+++E+K+AF YLGSR+ ++R  +A+  AD D DG+I   E+ KL+QYA    YT+
Subjt:  KSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTL

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein2.0e-3585.71Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTL
        MGNSKSKTYKRVLVPFSEEQLA+VFKNHD DGDG LTKEELKQAF+YLGSRFS+FRVEEALRAAD +GDG ISM EM KLI+YAK+RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTL

A0A5A7VBH2 Calcium-binding EF-hand1.7e-1854.22Show/hide
Query:  YKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTL
        YKR  VPFS +QL  +F  HDGDGDG+L++ ELK AFD LGS +S FR  ++L+AAD DGDG++++ E+D L+ YA  R+Y +
Subjt:  YKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTL

A0A7N2KRS3 Uncharacterized protein2.2e-1851.72Show/hide
Query:  KSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTL
        K+  +KR  VPF+E+QL ++FK+HD DGDGKL+++ELK AF YLGSR+ ++R ++ALR AD + DG+I+  E+ KL++YA    YT+
Subjt:  KSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTL

SwissProt top hitse value%identityAlignment
P07463 Calmodulin1.4e-0640Show/hide
Query:  SEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLI
        SEE+L   FK  D DG+G ++  EL+     LG + +   V+E +R ADIDGDG I+  E  +++
Subjt:  SEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLI

P24044 Calmodulin5.0e-0740Show/hide
Query:  SEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLI
        +EE+L   F+  D DGDG ++ +EL+     LG + ++  V+E +R ADIDGDG I+  E  K++
Subjt:  SEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLI

P62203 Calmodulin5.0e-0740Show/hide
Query:  SEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLI
        +EE+L   F+  D DGDG ++ +EL+     LG + ++  V+E +R ADIDGDG I+  E  K++
Subjt:  SEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLI

Q9FIH9 Calcium-binding protein CML371.7e-0742.86Show/hide
Query:  QLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQ
        +L +VF   D + DGK++ EEL+     LG   SS  VEE ++ +D+DGDGFI   E  KL++
Subjt:  QLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQ

Q9HFY6 Calmodulin5.0e-0741.54Show/hide
Query:  SEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLI
        SEE++   FK  D DG+G ++  EL+     LG + S   VEE +R AD+DGDG I+  E  K++
Subjt:  SEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLI

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein3.9e-0740Show/hide
Query:  FSEEQ---LASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQ
        F EE+   L +VF   D + DG+++ EELK++F  LG + S    E A++ +DIDGDG + + E   LI+
Subjt:  FSEEQ---LASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQ

AT3G51920.1 calmodulin 93.9e-0735.38Show/hide
Query:  SEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLI
        + ++L  VF+  D DGDG +++ EL +    +G + ++   E  +R AD+DGDGF+S  E  K++
Subjt:  SEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLI

AT4G04695.1 calcium-dependent protein kinase 311.7e-0739.24Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQ---LASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAE
        M   K    K +    SEE+   L ++F N D D  G +T EELK     LGS  S   VE+ + AAD+DG+G I + E
Subjt:  MGNSKSKTYKRVLVPFSEEQ---LASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAE

AT4G04720.1 calcium-dependent protein kinase 213.0e-0739.24Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQ---LASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAE
        M   K    K +    SEE+   L ++F N D D  G +T EELK     LGSR S   V++ + AAD+DG+G I   E
Subjt:  MGNSKSKTYKRVLVPFSEEQ---LASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAE

AT5G42380.1 calmodulin like 371.2e-0842.86Show/hide
Query:  QLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQ
        +L +VF   D + DGK++ EEL+     LG   SS  VEE ++ +D+DGDGFI   E  KL++
Subjt:  QLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTCCAAAAGCAAAACTTACAAACGAGTTCTTGTTCCATTCTCCGAGGAACAACTAGCTAGCGTTTTCAAGAACCACGATGGAGATGGTGATGGAAAGCTAAC
AAAGGAGGAGTTGAAGCAAGCCTTCGACTATCTTGGTTCACGCTTTAGCTCGTTCAGAGTAGAAGAGGCACTACGTGCCGCTGATATCGACGGTGATGGTTTCATAAGCA
TGGCCGAGATGGACAAGCTAATTCAATATGCCAAAAGTCGTAAATACACTCTTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAATTCCAAAAGCAAAACTTACAAACGAGTTCTTGTTCCATTCTCCGAGGAACAACTAGCTAGCGTTTTCAAGAACCACGATGGAGATGGTGATGGAAAGCTAAC
AAAGGAGGAGTTGAAGCAAGCCTTCGACTATCTTGGTTCACGCTTTAGCTCGTTCAGAGTAGAAGAGGCACTACGTGCCGCTGATATCGACGGTGATGGTTTCATAAGCA
TGGCCGAGATGGACAAGCTAATTCAATATGCCAAAAGTCGTAAATACACTCTTTGTTAA
Protein sequenceShow/hide protein sequence
MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDGDGFISMAEMDKLIQYAKSRKYTLC