; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg11887 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11887
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSmall VCP/p97-interacting protein
Genome locationCarg_Chr05:605631..608497
RNA-Seq ExpressionCarg11887
SyntenyCarg11887
Gene Ontology termsNA
InterPro domainsIPR031632 - Small VCP/p97-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029301.1 hypothetical protein SDJN02_07639, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-149100Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGVRSCSIVSFASFSLSNEKEKIVYLS
        MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGVRSCSIVSFASFSLSNEKEKIVYLS
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGVRSCSIVSFASFSLSNEKEKIVYLS

Query:  AILGSSCTKQLVYAPKSPKAEVIEWNYSLLQSCYQKSGLGGFPTRENACDVSFDMSGGFSDEQSLPIMRGQGKEWQKERKLMEYAGGTTNAIIELSYLLN
        AILGSSCTKQLVYAPKSPKAEVIEWNYSLLQSCYQKSGLGGFPTRENACDVSFDMSGGFSDEQSLPIMRGQGKEWQKERKLMEYAGGTTNAIIELSYLLN
Subjt:  AILGSSCTKQLVYAPKSPKAEVIEWNYSLLQSCYQKSGLGGFPTRENACDVSFDMSGGFSDEQSLPIMRGQGKEWQKERKLMEYAGGTTNAIIELSYLLN

Query:  FFPKTLPLRRQISASAQEASFEYMAAKSCQAARSKSRSAAACKREILEAVDLFLMWKRAAGKIIRACLTVPWSEYKHNIEAI
        FFPKTLPLRRQISASAQEASFEYMAAKSCQAARSKSRSAAACKREILEAVDLFLMWKRAAGKIIRACLTVPWSEYKHNIEAI
Subjt:  FFPKTLPLRRQISASAQEASFEYMAAKSCQAARSKSRSAAACKREILEAVDLFLMWKRAAGKIIRACLTVPWSEYKHNIEAI

XP_008444542.1 PREDICTED: uncharacterized protein LOC103487833 [Cucumis melo]2.7e-2490.79Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV
        MGQC SCLDEGQ+Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK+ +
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV

XP_022131511.1 uncharacterized protein LOC111004688 [Momordica charantia]2.5e-2284.21Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV
        MGQC  CLDEGQ+Q+R+EEERL+SVEARAKAAEAAQ+RQEEFEKSAAGRAARAQ+AANAKQSANTN+GEPVLK+ +
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV

XP_022962383.1 uncharacterized protein LOC111462843 [Cucurbita moschata]6.3e-2696.05Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV
        MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK+ +
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV

XP_038886006.1 uncharacterized protein LOC120076314 [Benincasa hispida]5.9e-2489.47Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV
        MGQC SCLDEG++Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK+ +
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV

TrEMBL top hitse value%identityAlignment
A0A1S3BAJ0 uncharacterized protein LOC1034878331.3e-2490.79Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV
        MGQC SCLDEGQ+Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK+ +
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV

A0A6J1GGM5 uncharacterized protein LOC1114540281.2e-2285.53Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV
        MGQC SCLDE Q+Q+RKEEERLASVEAR+KAAEAAQ+RQEEFEKSAAGRAARAQ+AANAKQSAN NKGEPVLK+ +
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV

A0A6J1HEN1 uncharacterized protein LOC1114628433.1e-2696.05Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV
        MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK+ +
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV

A0A6J1K846 uncharacterized protein LOC1114920133.1e-2696.05Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV
        MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK+ +
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV

A0A6J1KLT2 uncharacterized protein LOC1114964241.2e-2285.53Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV
        MGQC SCLDE Q+Q+RKEEERLASVEAR+KAAEAAQ+RQEEFEKSAAGRAARAQ+AANAKQSAN NKGEPVLK+ +
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63905.1 unknown protein1.0e-1874.65Show/hide
Query:  CASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKY
        C SC D  Q+++RKEEER AS EARAKAAEAAQ+R+E+F+KSAAGRAA+AQL   AKQSANTNKGEPVLK+
Subjt:  CASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAATGCGCAAGTTGCCTCGACGAAGGCCAAGAGCAAGAGAGGAAGGAGGAAGAAAGATTGGCATCCGTCGAAGCTCGCGCCAAAGCTGCTGAAGCCGCTCAGAA
AAGGCAAGAAGAATTTGAAAAATCTGCTGCAGGAAGGGCTGCACGTGCTCAGTTGGCCGCAAATGCAAAGCAATCTGCTAACACTAACAAGGGAGAACCAGTTCTTAAGT
ATGGGGTGAGGTCGTGCTCTATTGTCAGCTTCGCTTCTTTTTCGCTTTCTAATGAAAAGGAAAAAATTGTATATTTATCCGCGATCCTGGGCTCCTCTTGTACAAAGCAA
CTTGTGTATGCTCCCAAGTCTCCCAAGGCAGAAGTTATTGAATGGAACTACAGTCTTCTACAGAGTTGCTATCAGAAGTCGGGCCTTGGTGGGTTCCCAACACGGGAAAA
TGCCTGTGATGTATCCTTCGACATGTCGGGAGGCTTTTCTGATGAGCAGTCATTGCCAATTATGAGAGGTCAAGGAAAAGAATGGCAGAAGGAAAGAAAATTGATGGAAT
ATGCTGGTGGCACAACCAATGCAATAATTGAGCTTTCATATCTGCTCAACTTCTTCCCCAAAACTCTTCCTCTCAGAAGGCAAATTTCTGCATCCGCCCAGGAAGCAAGT
TTTGAATATATGGCAGCCAAATCCTGCCAGGCTGCCCGTTCTAAGTCACGTTCTGCCGCTGCCTGCAAAAGAGAGATTTTAGAAGCTGTTGATCTCTTCCTGATGTGGAA
AAGGGCCGCAGGAAAGATTATCAGGGCGTGCCTAACTGTACCATGGAGTGAATACAAACATAATATAGAAGCAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGCAATGCGCAAGTTGCCTCGACGAAGGCCAAGAGCAAGAGAGGAAGGAGGAAGAAAGATTGGCATCCGTCGAAGCTCGCGCCAAAGCTGCTGAAGCCGCTCAGAA
AAGGCAAGAAGAATTTGAAAAATCTGCTGCAGGAAGGGCTGCACGTGCTCAGTTGGCCGCAAATGCAAAGCAATCTGCTAACACTAACAAGGGAGAACCAGTTCTTAAGT
ATGGGGTGAGGTCGTGCTCTATTGTCAGCTTCGCTTCTTTTTCGCTTTCTAATGAAAAGGAAAAAATTGTATATTTATCCGCGATCCTGGGCTCCTCTTGTACAAAGCAA
CTTGTGTATGCTCCCAAGTCTCCCAAGGCAGAAGTTATTGAATGGAACTACAGTCTTCTACAGAGTTGCTATCAGAAGTCGGGCCTTGGTGGGTTCCCAACACGGGAAAA
TGCCTGTGATGTATCCTTCGACATGTCGGGAGGCTTTTCTGATGAGCAGTCATTGCCAATTATGAGAGGTCAAGGAAAAGAATGGCAGAAGGAAAGAAAATTGATGGAAT
ATGCTGGTGGCACAACCAATGCAATAATTGAGCTTTCATATCTGCTCAACTTCTTCCCCAAAACTCTTCCTCTCAGAAGGCAAATTTCTGCATCCGCCCAGGAAGCAAGT
TTTGAATATATGGCAGCCAAATCCTGCCAGGCTGCCCGTTCTAAGTCACGTTCTGCCGCTGCCTGCAAAAGAGAGATTTTAGAAGCTGTTGATCTCTTCCTGATGTGGAA
AAGGGCCGCAGGAAAGATTATCAGGGCGTGCCTAACTGTACCATGGAGTGAATACAAACATAATATAGAAGCAATTTAG
Protein sequenceShow/hide protein sequence
MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKYGVRSCSIVSFASFSLSNEKEKIVYLSAILGSSCTKQ
LVYAPKSPKAEVIEWNYSLLQSCYQKSGLGGFPTRENACDVSFDMSGGFSDEQSLPIMRGQGKEWQKERKLMEYAGGTTNAIIELSYLLNFFPKTLPLRRQISASAQEAS
FEYMAAKSCQAARSKSRSAAACKREILEAVDLFLMWKRAAGKIIRACLTVPWSEYKHNIEAI