; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12000 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12000
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionhomeobox protein knotted-1-like 1
Genome locationCarg_Chr05:9102169..9106063
RNA-Seq ExpressionCarg12000
SyntenyCarg12000
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR005539 - ELK domain
IPR005540 - KNOX1
IPR005541 - KNOX2
IPR008422 - Homeobox KN domain
IPR009057 - Homeobox-like domain superfamily
IPR017970 - Homeobox, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599184.1 Homeobox protein knotted-1-like 1, partial [Cucurbita argyrosperma subsp. sororia]5.3e-14786.08Show/hide
Query:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
        MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
Subjt:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN

Query:  HPSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN------------------------------
        HPSRSCIELGADPQLDNFM           NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN                              
Subjt:  HPSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN------------------------------

Query:  ---DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG
           DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG
Subjt:  ---DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG

Query:  VGDGDGECIKGLNQAI
        VGDGDGECIKGLNQAI
Subjt:  VGDGDGECIKGLNQAI

KAG7030118.1 Homeobox protein knotted-1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-154100Show/hide
Query:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
        MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
Subjt:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN

Query:  HPSRSCIELGADPQLDNFMNELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEW
        HPSRSCIELGADPQLDNFMNELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEW
Subjt:  HPSRSCIELGADPQLDNFMNELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEW

Query:  WSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGVGDGDGECIKGLNQAI
        WSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGVGDGDGECIKGLNQAI
Subjt:  WSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGVGDGDGECIKGLNQAI

XP_022946414.1 homeobox protein knotted-1-like 1 isoform X2 [Cucurbita moschata]1.1e-14484.42Show/hide
Query:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
        MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
Subjt:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN

Query:  HPSRSCIELGADPQLDNFM----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN-------------------------------
        HPSRSCIELGADPQLDNFM          NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN                               
Subjt:  HPSRSCIELGADPQLDNFM----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN-------------------------------

Query:  --DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGV
          DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG 
Subjt:  --DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGV

Query:  ------GDGDGECIKGLNQAI
              GDGDGECIKGLNQAI
Subjt:  ------GDGDGECIKGLNQAI

XP_023545300.1 homeobox protein knotted-1-like 1 isoform X1 [Cucurbita pepo subsp. pepo]1.1e-14484.81Show/hide
Query:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
        MDEFYRLNNPVM+SYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
Subjt:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN

Query:  HPSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN------------------------------
        HPSRSCIELGADPQLDNFM           NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRS IN                              
Subjt:  HPSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN------------------------------

Query:  ---DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG
           DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG
Subjt:  ---DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG

Query:  VGDGDGECIKGLNQAI
         G GDGECIKGLNQAI
Subjt:  VGDGDGECIKGLNQAI

XP_023545301.1 homeobox protein knotted-1-like 1 isoform X2 [Cucurbita pepo subsp. pepo]8.5e-14585.08Show/hide
Query:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
        MDEFYRLNNPVM+SYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
Subjt:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN

Query:  HPSRSCIELGADPQLDNFM----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN-------------------------------
        HPSRSCIELGADPQLDNFM          NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRS IN                               
Subjt:  HPSRSCIELGADPQLDNFM----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN-------------------------------

Query:  --DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGV
          DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG 
Subjt:  --DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGV

Query:  GDGDGECIKGLNQAI
        G GDGECIKGLNQAI
Subjt:  GDGDGECIKGLNQAI

TrEMBL top hitse value%identityAlignment
A0A0A0LGZ6 Uncharacterized protein1.6e-12876.68Show/hide
Query:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
        M+EFYRLNNPV++SYSNGV+G EAIASTSCG+IHEALMVDD++L LEAE TTGLNMSDMIKTQI+NHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
Subjt:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN

Query:  HPSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN------------------------------
        HPSRS IELGADPQLDNFM           NELSKPFDEA MFLTNIELELSNLCKGSFT  S+SRSA+N                              
Subjt:  HPSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN------------------------------

Query:  ---DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG
           DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALL+WW+THYKWPYPTEEEKSKLSV TGLDQKQINNWFINQRKRHWKPPEDMRF+LMDG G
Subjt:  ---DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG

Query:  VGDGDGECIKGLN
             GEC+KG N
Subjt:  VGDGDGECIKGLN

A0A6J1G3P7 homeobox protein knotted-1-like 1 isoform X25.4e-14584.42Show/hide
Query:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
        MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
Subjt:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN

Query:  HPSRSCIELGADPQLDNFM----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN-------------------------------
        HPSRSCIELGADPQLDNFM          NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN                               
Subjt:  HPSRSCIELGADPQLDNFM----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN-------------------------------

Query:  --DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGV
          DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG 
Subjt:  --DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGV

Query:  ------GDGDGECIKGLNQAI
              GDGDGECIKGLNQAI
Subjt:  ------GDGDGECIKGLNQAI

A0A6J1G3R0 homeobox protein knotted-1-like 1 isoform X17.0e-14584.16Show/hide
Query:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
        MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
Subjt:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN

Query:  HPSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN------------------------------
        HPSRSCIELGADPQLDNFM           NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN                              
Subjt:  HPSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN------------------------------

Query:  ---DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG
           DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG
Subjt:  ---DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG

Query:  V------GDGDGECIKGLNQAI
               GDGDGECIKGLNQAI
Subjt:  V------GDGDGECIKGLNQAI

A0A6J1KFR9 homeobox protein knotted-1-like 1 isoform X21.0e-14384.01Show/hide
Query:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
        M+EFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
Subjt:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN

Query:  HPSRSCIELGADPQLDNFM----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN-------------------------------
        HPSRSCIELGADPQLDNFM          NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAI+                               
Subjt:  HPSRSCIELGADPQLDNFM----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN-------------------------------

Query:  --DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGV
          DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWS HYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGV
Subjt:  --DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGV

Query:  GDGDGE----CIKGLNQAI
        GDGDG+    CIKGLNQAI
Subjt:  GDGDGE----CIKGLNQAI

A0A6J1KHG4 homeobox protein knotted-1-like 1 isoform X11.3e-14383.75Show/hide
Query:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
        M+EFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN
Subjt:  MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGREN

Query:  HPSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN------------------------------
        HPSRSCIELGADPQLDNFM           NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAI+                              
Subjt:  HPSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIN------------------------------

Query:  ---DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG
           DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWS HYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG
Subjt:  ---DLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG

Query:  VGDGDGE----CIKGLNQAI
        VGDGDG+    CIKGLNQAI
Subjt:  VGDGDGE----CIKGLNQAI

SwissProt top hitse value%identityAlignment
A2Y007 Homeobox protein knotted-1-like 104.3e-6752.14Show/hide
Query:  AEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENH----PSRSCIELGADPQLDNFM-----------NELSKPFDEAAMF
        A      ++++++K QI  HP YP L+SAYIEC+KVGAPP+V +LLEEIGRE       + +  E+G DP+LD FM            EL++PFDEAA F
Subjt:  AEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENH----PSRSCIELGADPQLDNFM-----------NELSKPFDEAAMF

Query:  LTNIELELSNLCKGS---------------------------FTATSESRSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHY
        LT I  +L++LC G+                           F     SR A ++LKEMLLKKYSG LS L+ EFLKKRKK KLPKDAR AL++WW+THY
Subjt:  LTNIELELSNLCKGS---------------------------FTATSESRSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHY

Query:  KWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGVGDGDG
        +WPYPTEE+K +L+ +TGLD KQINNWFINQRKRHWKP EDMRF LM+G   G   G
Subjt:  KWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGVGDGDG

P46640 Homeobox protein knotted-1-like 24.3e-5947.88Show/hide
Query:  ALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSR------SCIELGADPQLDNFM----------
        A  +  ELL    +     ++S +IK++I +HPLYP+L+  YI+CQKVGAP ++A +LEEI RENH  +      SC   GADP+LD FM          
Subjt:  ALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSR------SCIELGADPQLDNFM----------

Query:  -NELSKPFDEAAMFLTNIELELSNLCKGSFTAT------------------------SESRSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDAR
          +L++PFDEA  F+  IE++L NLC G  +AT                        S+ RS   DLK+ LL+K+  ++SSLK EF KK+KK KLP++AR
Subjt:  -NELSKPFDEAAMFLTNIELELSNLCKGSFTAT------------------------SESRSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDAR

Query:  MALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMD
         ALL+WW+ H KWPYPTE +K  L+  TGLDQKQINNWFINQRKRHWKP E+M F +MD
Subjt:  MALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMD

Q7GDL5 Homeobox protein knotted-1-like 104.3e-6752.14Show/hide
Query:  AEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENH----PSRSCIELGADPQLDNFM-----------NELSKPFDEAAMF
        A      ++++++K QI  HP YP L+SAYIEC+KVGAPP+V +LLEEIGRE       + +  E+G DP+LD FM            EL++PFDEAA F
Subjt:  AEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENH----PSRSCIELGADPQLDNFM-----------NELSKPFDEAAMF

Query:  LTNIELELSNLCKGS---------------------------FTATSESRSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHY
        LT I  +L++LC G+                           F     SR A ++LKEMLLKKYSG LS L+ EFLKKRKK KLPKDAR AL++WW+THY
Subjt:  LTNIELELSNLCKGS---------------------------FTATSESRSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHY

Query:  KWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGVGDGDG
        +WPYPTEE+K +L+ +TGLD KQINNWFINQRKRHWKP EDMRF LM+G   G   G
Subjt:  KWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGVGDGDG

Q84JS6 Homeobox protein knotted-1-like 61.2e-5650.21Show/hide
Query:  MIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENH-------PSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELEL
        +IK +I  HP YP+L+ AYI+CQKVGAPP++A LLEEI RE+        PS SC   GADP+LD FM           ++L++PFDEA  FL  IE++L
Subjt:  MIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENH-------PSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELEL

Query:  SNLCKGSFTATSESRSAI------------------------NDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKS
         NLC G  +A   S   +                         DLK+ LL+K+   +S+LK EF KK+KK KLP++AR ALL+WW+ HYKWPYPTE +K 
Subjt:  SNLCKGSFTATSESRSAI------------------------NDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKS

Query:  KLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMD
         L+  TGLDQKQINNWFINQRKRHWKP E+M F +MD
Subjt:  KLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMD

Q9FP29 Homeobox protein knotted-1-like 11.3e-6654.62Show/hide
Query:  NMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHP---SRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELEL
        ++++++K QI  HP YP L+SAYIEC+KVGAPP+VASLL+EIGRE           ++G DP+LD FM            ELS+PFDEAA FL++I+ +L
Subjt:  NMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHP---SRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELEL

Query:  SNLCKG-----SFTAT--------------------------SESRSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPY
        SNLC G     + TAT                            SR A ++LKEMLLKKYSG LS L+ EFLKKRKK KLPKDAR ALLEWW+THY+WPY
Subjt:  SNLCKG-----SFTAT--------------------------SESRSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPY

Query:  PTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGVG
        PTEE+K +L+  TGLD KQINNWFINQRKRHWKP + MRF LM+G   G
Subjt:  PTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGVG

Arabidopsis top hitse value%identityAlignment
AT1G23380.1 KNOTTED1-like homeobox gene 68.4e-5850.21Show/hide
Query:  MIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENH-------PSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELEL
        +IK +I  HP YP+L+ AYI+CQKVGAPP++A LLEEI RE+        PS SC   GADP+LD FM           ++L++PFDEA  FL  IE++L
Subjt:  MIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENH-------PSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIELEL

Query:  SNLCKGSFTATSESRSAI------------------------NDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKS
         NLC G  +A   S   +                         DLK+ LL+K+   +S+LK EF KK+KK KLP++AR ALL+WW+ HYKWPYPTE +K 
Subjt:  SNLCKGSFTATSESRSAI------------------------NDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKS

Query:  KLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMD
         L+  TGLDQKQINNWFINQRKRHWKP E+M F +MD
Subjt:  KLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMD

AT1G23380.2 KNOTTED1-like homeobox gene 62.7e-5649.79Show/hide
Query:  MIKTQIINHPLYPKLVSAYIECQK--VGAPPQVASLLEEIGRENH-------PSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIEL
        +IK +I  HP YP+L+ AYI+CQK  VGAPP++A LLEEI RE+        PS SC   GADP+LD FM           ++L++PFDEA  FL  IE+
Subjt:  MIKTQIINHPLYPKLVSAYIECQK--VGAPPQVASLLEEIGRENH-------PSRSCIELGADPQLDNFM-----------NELSKPFDEAAMFLTNIEL

Query:  ELSNLCKGSFTATSESRSAI------------------------NDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEE
        +L NLC G  +A   S   +                         DLK+ LL+K+   +S+LK EF KK+KK KLP++AR ALL+WW+ HYKWPYPTE +
Subjt:  ELSNLCKGSFTATSESRSAI------------------------NDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEE

Query:  KSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMD
        K  L+  TGLDQKQINNWFINQRKRHWKP E+M F +MD
Subjt:  KSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMD

AT1G62360.1 KNOX/ELK homeobox transcription factor5.1e-5544.03Show/hide
Query:  TSCGDIHEALMV-DDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSCIE----LGADPQLDNFM---
        +SC   +  + +  +E++     P +  + S  +K +I+ HP Y +L++AY+ CQKVGAPP+V + LEE       + + +     LG DP LD FM   
Subjt:  TSCGDIHEALMV-DDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSCIE----LGADPQLDNFM---

Query:  --------NELSKPFDEAAMFLTNIELELSNLCKGSFTA---------------TSESRSAIN-----------DLKEMLLKKYSGYLSSLKKEFLKKRK
                 ELSKPF EA +FL  +E +  +L   S ++               +SE    +N           +LK  LL+KYSGYL SLK+EF+KKRK
Subjt:  --------NELSKPFDEAAMFLTNIELELSNLCKGSFTA---------------TSESRSAIN-----------DLKEMLLKKYSGYLSSLKKEFLKKRK

Query:  KEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMD
        K KLPK+AR  LL+WWS HYKWPYP+E++K  L+  TGLDQKQINNWFINQRKRHWKP EDM+F++MD
Subjt:  KEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMD

AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 23.1e-6047.88Show/hide
Query:  ALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSR------SCIELGADPQLDNFM----------
        A  +  ELL    +     ++S +IK++I +HPLYP+L+  YI+CQKVGAP ++A +LEEI RENH  +      SC   GADP+LD FM          
Subjt:  ALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSR------SCIELGADPQLDNFM----------

Query:  -NELSKPFDEAAMFLTNIELELSNLCKGSFTAT------------------------SESRSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDAR
          +L++PFDEA  F+  IE++L NLC G  +AT                        S+ RS   DLK+ LL+K+  ++SSLK EF KK+KK KLP++AR
Subjt:  -NELSKPFDEAAMFLTNIELELSNLCKGSFTAT------------------------SESRSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDAR

Query:  MALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMD
         ALL+WW+ H KWPYPTE +K  L+  TGLDQKQINNWFINQRKRHWKP E+M F +MD
Subjt:  MALLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMD

AT4G08150.1 KNOTTED-like from Arabidopsis thaliana8.1e-5346.27Show/hide
Query:  EAEPTTGLNMSDM--IKTQIINHPLYPKLVSAYIECQKVGAPPQV-----ASLLEEIGRENHPSRSCIELGADPQLDNFM-----------NELSKPFDE
        EA      N+SD+  +K +II HP Y  L+ AY++CQK+GAPP V     A+  +   R+   + S      DP+LD FM            EL++P  E
Subjt:  EAEPTTGLNMSDM--IKTQIINHPLYPKLVSAYIECQKVGAPPQV-----ASLLEEIGRENHPSRSCIELGADPQLDNFM-----------NELSKPFDE

Query:  AAMFLTNIELELSNLCK----------------GSFTATSES-------------RSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLE
        A  F+  IE +LS LC+                GS     E+             R+   +LK  LLKKYSGYLSSLK+E  KK+KK KLPK+AR  LL 
Subjt:  AAMFLTNIELELSNLCK----------------GSFTATSES-------------RSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLE

Query:  WWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDG
        WW  HYKWPYP+E EK  L+  TGLDQKQINNWFINQRKRHWKP EDM+FM+MDG
Subjt:  WWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGTTTTACAGGCTTAACAACCCTGTCATGTCCTCTTATTCTAATGGTGTTCTTGGAGGTGAAGCCATTGCTAGCACCAGCTGTGGTGATATTCATGAAGCTCT
AATGGTGGATGATGAACTGCTTCACCTTGAAGCAGAGCCCACCACTGGCTTGAACATGTCTGACATGATCAAGACTCAGATTATCAACCATCCCCTTTACCCCAAATTGG
TTTCTGCTTACATTGAATGCCAAAAAGTTGGAGCTCCACCACAAGTGGCTTCTCTTCTTGAAGAAATTGGCCGTGAAAATCATCCTTCTAGATCTTGTATTGAGTTGGGA
GCTGATCCTCAACTAGACAACTTTATGAATGAGCTATCCAAGCCATTTGATGAAGCAGCCATGTTCTTGACCAACATTGAATTGGAGCTAAGCAACCTGTGTAAAGGATC
GTTTACTGCAACGTCCGAATCTCGCTCCGCCATTAACGACCTCAAAGAAATGCTGCTAAAGAAGTACAGTGGGTATCTAAGCAGTTTGAAGAAGGAATTCTTGAAGAAGA
GGAAAAAGGAGAAGCTGCCAAAGGATGCAAGAATGGCTCTACTTGAGTGGTGGAGTACTCATTATAAATGGCCTTATCCTACAGAAGAGGAAAAATCAAAACTCTCTGTT
ATCACTGGTTTGGATCAAAAGCAGATCAATAACTGGTTCATAAACCAGAGAAAGCGGCATTGGAAGCCGCCCGAAGATATGCGGTTCATGCTCATGGACGGGGCCGGGGT
CGGGGACGGGGACGGGGAATGCATCAAAGGATTGAATCAGGCCATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGTTTTACAGGCTTAACAACCCTGTCATGTCCTCTTATTCTAATGGTGTTCTTGGAGGTGAAGCCATTGCTAGCACCAGCTGTGGTGATATTCATGAAGCTCT
AATGGTGGATGATGAACTGCTTCACCTTGAAGCAGAGCCCACCACTGGCTTGAACATGTCTGACATGATCAAGACTCAGATTATCAACCATCCCCTTTACCCCAAATTGG
TTTCTGCTTACATTGAATGCCAAAAAGTTGGAGCTCCACCACAAGTGGCTTCTCTTCTTGAAGAAATTGGCCGTGAAAATCATCCTTCTAGATCTTGTATTGAGTTGGGA
GCTGATCCTCAACTAGACAACTTTATGAATGAGCTATCCAAGCCATTTGATGAAGCAGCCATGTTCTTGACCAACATTGAATTGGAGCTAAGCAACCTGTGTAAAGGATC
GTTTACTGCAACGTCCGAATCTCGCTCCGCCATTAACGACCTCAAAGAAATGCTGCTAAAGAAGTACAGTGGGTATCTAAGCAGTTTGAAGAAGGAATTCTTGAAGAAGA
GGAAAAAGGAGAAGCTGCCAAAGGATGCAAGAATGGCTCTACTTGAGTGGTGGAGTACTCATTATAAATGGCCTTATCCTACAGAAGAGGAAAAATCAAAACTCTCTGTT
ATCACTGGTTTGGATCAAAAGCAGATCAATAACTGGTTCATAAACCAGAGAAAGCGGCATTGGAAGCCGCCCGAAGATATGCGGTTCATGCTCATGGACGGGGCCGGGGT
CGGGGACGGGGACGGGGAATGCATCAAAGGATTGAATCAGGCCATATAATTTGATTTAGCTTCTTTTGTAGTTTATCTTCTCTTCTTCCCCTTTGTTTTCTTTGGTTTTG
TAGACTTAGAATTTCTTGACTTTAGACAGAAACACGTGAATATATTAGAACGTAAAAGTGTTTGTAACAACCCGGCTTTCCGCACACGTATGTTTCAAACTCGTTACTTG
AAACTGAAGATAATTTAGTAAAATCATGTTCCAGGT
Protein sequenceShow/hide protein sequence
MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMIKTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSCIELG
ADPQLDNFMNELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAINDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLEWWSTHYKWPYPTEEEKSKLSV
ITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAGVGDGDGECIKGLNQAI