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Carg12003 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12003
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr05:9120797..9123507
RNA-Seq ExpressionCarg12003
SyntenyCarg12003
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599187.1 hypothetical protein SDJN03_08965, partial [Cucurbita argyrosperma subsp. sororia]2.4e-9899.46Show/hide
Query:  MGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGMSVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLR
        MGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGMSVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLR
Subjt:  MGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGMSVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLR

Query:  GSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVVVHFLPNFVHEKEDYVRNEAFLDSRVNKASIYVSFEGCEES
        GSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVVVHFLPNFVHEKEDYV NEAFLDSRVNKASIYVSFEGCEES
Subjt:  GSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVVVHFLPNFVHEKEDYVRNEAFLDSRVNKASIYVSFEGCEES

KAG7030121.1 hypothetical protein SDJN02_08468, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-131100Show/hide
Query:  MGFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM
        MGFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM
Subjt:  MGFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM

Query:  SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV
        SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV
Subjt:  SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV

Query:  VHFLPNFVHEKEDYVRNEAFLDSRVNKASIYVSFEGCEES
        VHFLPNFVHEKEDYVRNEAFLDSRVNKASIYVSFEGCEES
Subjt:  VHFLPNFVHEKEDYVRNEAFLDSRVNKASIYVSFEGCEES

XP_022946415.1 uncharacterized protein LOC111450479 [Cucurbita moschata]8.9e-13098.75Show/hide
Query:  MGFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM
        MGFDFDFAKKCVQFL+FIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM
Subjt:  MGFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM

Query:  SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV
        SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIIS GWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV
Subjt:  SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV

Query:  VHFLPNFVHEKEDYVRNEAFLDSRVNKASIYVSFEGCEES
        VHFLPNFVHEKEDYV NEAFLDSRVNKASIYVSFEGCEES
Subjt:  VHFLPNFVHEKEDYVRNEAFLDSRVNKASIYVSFEGCEES

XP_022999574.1 uncharacterized protein LOC111493899 [Cucurbita maxima]6.2e-9194.05Show/hide
Query:  FDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGMSV
        FDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKIT LNCFDMGSGL+ACGVKEGAKLYFYNIQTAHVE VQR+AFETALADAVTEGMSV
Subjt:  FDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGMSV

Query:  NDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSW
        NDAAKHAWKEGVKAAEV KQ  KRIIGLIIS GWDFFEALYYSGTVTE  LRG GTLVGAYSGGFIGEQGLGRLGYLVGSHLGSW
Subjt:  NDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSW

XP_023545318.1 uncharacterized protein LOC111804760 [Cucurbita pepo subsp. pepo]1.2e-12697.9Show/hide
Query:  FDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGMSV
        FDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGMSV
Subjt:  FDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGMSV

Query:  NDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVVVH
        NDAAKHAWKEGVKAAEV KQ AKRIIGLIIS GWDFF+ALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVVVH
Subjt:  NDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVVVH

Query:  FLPNFVHEKEDYVRNEAFLDSRVNKASIYVSFEGCEES
        FLPNFVHEKEDYV NEAFLDSRVNKASIYVSFEGCEES
Subjt:  FLPNFVHEKEDYVRNEAFLDSRVNKASIYVSFEGCEES

TrEMBL top hitse value%identityAlignment
A0A0A0LK00 Uncharacterized protein5.3e-8871.03Show/hide
Query:  MGFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM
        M F+FDF KK +Q LVFIIG I LSF  EKCRH LV EEASSQSGK TFLNCFDMGSG +ACGVKEG KLYFYNI++AHVE+V+  A ETALADA+T+GM
Subjt:  MGFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM

Query:  SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV
        S  +AAKHA KEGVKAA++AK+ AKRIIG IIS GWDFFEALYY GT+TEG LRGSGTL GAY+GGFIG+Q LGR GYL+GSHLGSW+GGR+G+M YDVV
Subjt:  SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV

Query:  --VHFLPNF--------VHEKE-DYVRNEAFLD-SRVNKASIYVSFEGCEES
          VHFL NF        VHEKE  YV NEA  D S VN A IY + E  EES
Subjt:  --VHFLPNF--------VHEKE-DYVRNEAFLD-SRVNKASIYVSFEGCEES

A0A5A7U1F4 Uncharacterized protein5.3e-8871.83Show/hide
Query:  MGFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM
        M F+FDFAKK +Q LVFIIG I LSF  EKCRH LV EEASSQSGK TFLNCFDMGSG +ACGVKEG KLYFYNIQ+AHVE V+  A ETALADA+T+GM
Subjt:  MGFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM

Query:  SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV
        S  +AAKHA KEGVKAA++AK+ AKRIIG IIS GWDFFEA+YY GTVTEG LRGSGTL GAY+GGFIGEQ LGR GYL+GSHLGSW+GGR+G+M YDVV
Subjt:  SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV

Query:  --VHFLPNF--------VHEKE-DYVRNEAFLD-SRVNKASIYVSFEGCEES
          VHFL NF        VHEKE  YV NEA  D S V  A IY + E  EES
Subjt:  --VHFLPNF--------VHEKE-DYVRNEAFLD-SRVNKASIYVSFEGCEES

A0A5D3B9C7 Uncharacterized protein5.3e-8871.83Show/hide
Query:  MGFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM
        M F+FDFAKK +Q LVFIIG I LSF  EKCRH LV EEASSQSGK TFLNCFDMGSG +ACGVKEG KLYFYNIQ+AHVE V+  A ETALADA+T+GM
Subjt:  MGFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM

Query:  SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV
        S  +AAKHA KEGVKAA++AK+ AKRIIG IIS GWDFFEA+YY GTVTEG LRGSGTL GAY+GGFIGEQ LGR GYL+GSHLGSW+GGR+G+M YDVV
Subjt:  SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV

Query:  --VHFLPNF--------VHEKE-DYVRNEAFLD-SRVNKASIYVSFEGCEES
          VHFL NF        VHEKE  YV NEA  D S V  A IY + E  EES
Subjt:  --VHFLPNF--------VHEKE-DYVRNEAFLD-SRVNKASIYVSFEGCEES

A0A6J1G3T3 uncharacterized protein LOC1114504794.3e-13098.75Show/hide
Query:  MGFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM
        MGFDFDFAKKCVQFL+FIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM
Subjt:  MGFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGM

Query:  SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV
        SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIIS GWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV
Subjt:  SVNDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVV

Query:  VHFLPNFVHEKEDYVRNEAFLDSRVNKASIYVSFEGCEES
        VHFLPNFVHEKEDYV NEAFLDSRVNKASIYVSFEGCEES
Subjt:  VHFLPNFVHEKEDYVRNEAFLDSRVNKASIYVSFEGCEES

A0A6J1KHG8 uncharacterized protein LOC1114938993.0e-9194.05Show/hide
Query:  FDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGMSV
        FDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKIT LNCFDMGSGL+ACGVKEGAKLYFYNIQTAHVE VQR+AFETALADAVTEGMSV
Subjt:  FDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGMSV

Query:  NDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSW
        NDAAKHAWKEGVKAAEV KQ  KRIIGLIIS GWDFFEALYYSGTVTE  LRG GTLVGAYSGGFIGEQGLGRLGYLVGSHLGSW
Subjt:  NDAAKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G56423.1 unknown protein4.8e-6557.4Show/hide
Query:  DFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGMSVNDA
        DF  + VQFL+F IG IALS   EKCR +LV +EA+S+SG+ TFLNCFDM SG LAC VKEG KLYFYNI++ HVE  +  A E AL +A+  GM   +A
Subjt:  DFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGMSVNDA

Query:  AKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVVVHFLP
        AK   + G KAA++A + AKRIIG I++ GWDFFEALY+ GT+TEG LRG+GT+VGAYSGG++GEQ  GR GYLVGS LG+W+G R+G+M YDVV     
Subjt:  AKHAWKEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVVVHFLP

Query:  NFVHEKEDYVRNEAFLDSRVNKA
        NF +  E Y   E + D   N++
Subjt:  NFVHEKEDYVRNEAFLDSRVNKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCGATTTCGATTTCGCGAAGAAGTGCGTTCAATTTCTGGTATTTATAATCGGCGCCATCGCCCTCAGTTTCATAGTGGAGAAATGTCGACATGATCTGGTTAG
GGAGGAAGCTTCATCCCAGAGTGGAAAGATCACATTCTTGAATTGTTTCGACATGGGTTCTGGATTACTTGCTTGTGGTGTGAAGGAGGGGGCAAAGCTCTACTTCTACA
ACATCCAAACCGCTCATGTCGAGACAGTACAACGCGAAGCATTCGAGACCGCCCTGGCCGACGCAGTGACAGAGGGAATGTCTGTGAATGATGCAGCAAAACACGCATGG
AAAGAGGGAGTTAAGGCAGCAGAGGTGGCAAAGCAACACGCGAAACGCATCATAGGGCTGATCATCTCTTTTGGATGGGACTTTTTTGAAGCTCTATACTATAGTGGTAC
TGTAACAGAAGGGCTCCTCAGGGGCTCGGGGACGCTCGTTGGCGCATACTCGGGAGGCTTCATCGGCGAGCAAGGGCTCGGGAGGCTCGGCTACCTTGTAGGAAGTCATT
TAGGTAGTTGGATTGGAGGTAGAATGGGAGTGATGGCATATGATGTTGTAGTGCATTTCTTACCCAATTTTGTTCATGAAAAGGAAGATTACGTTCGAAATGAGGCTTTT
TTGGACTCCCGGGTTAACAAAGCTTCTATTTATGTCAGCTTTGAAGGTTGTGAAGAATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCGATTTCGATTTCGCGAAGAAGTGCGTTCAATTTCTGGTATTTATAATCGGCGCCATCGCCCTCAGTTTCATAGTGGAGAAATGTCGACATGATCTGGTTAG
GGAGGAAGCTTCATCCCAGAGTGGAAAGATCACATTCTTGAATTGTTTCGACATGGGTTCTGGATTACTTGCTTGTGGTGTGAAGGAGGGGGCAAAGCTCTACTTCTACA
ACATCCAAACCGCTCATGTCGAGACAGTACAACGCGAAGCATTCGAGACCGCCCTGGCCGACGCAGTGACAGAGGGAATGTCTGTGAATGATGCAGCAAAACACGCATGG
AAAGAGGGAGTTAAGGCAGCAGAGGTGGCAAAGCAACACGCGAAACGCATCATAGGGCTGATCATCTCTTTTGGATGGGACTTTTTTGAAGCTCTATACTATAGTGGTAC
TGTAACAGAAGGGCTCCTCAGGGGCTCGGGGACGCTCGTTGGCGCATACTCGGGAGGCTTCATCGGCGAGCAAGGGCTCGGGAGGCTCGGCTACCTTGTAGGAAGTCATT
TAGGTAGTTGGATTGGAGGTAGAATGGGAGTGATGGCATATGATGTTGTAGTGCATTTCTTACCCAATTTTGTTCATGAAAAGGAAGATTACGTTCGAAATGAGGCTTTT
TTGGACTCCCGGGTTAACAAAGCTTCTATTTATGTCAGCTTTGAAGGTTGTGAAGAATCATAG
Protein sequenceShow/hide protein sequence
MGFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGMSVNDAAKHAW
KEGVKAAEVAKQHAKRIIGLIISFGWDFFEALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVVVHFLPNFVHEKEDYVRNEAF
LDSRVNKASIYVSFEGCEES