CuGenDBv2

Gene ID	Carg12045
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	light-harvesting complex-like protein 3 isotype 1, chloroplastic
Genome location	Carg_Chr05:9407283..9408420
RNA-Seq Expression	Carg12045
Synteny	Carg12045
Gene Ontology terms	GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6596887.1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-125

98.73

Show/hide

Query:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN
        MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN
Subjt:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN

Query:  QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA
        QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLN   AMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA
Subjt:  QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA

Query:  VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
        VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
Subjt:  VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED

KAG7030162.1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

5.7e-129

100

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Query:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN
        MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN
Subjt:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN

Query:  QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA
        QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA
Subjt:  QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA

Query:  VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
        VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
Subjt:  VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED

XP_022934837.1 light-harvesting complex-like protein 3 isotype 2, chloroplastic [Cucurbita moschata]

1.0e-125

97.88

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Query:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN
        MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRS S SSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN
Subjt:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN

Query:  QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA
        QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVG+MGNFFCKTLLFVA
Subjt:  QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA

Query:  VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
        VVGVV IR+NEDIETLKKLIDETSLYDKQWRATWED
Subjt:  VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED

XP_023005522.1 light-harvesting complex-like protein 3 isotype 2, chloroplastic [Cucurbita maxima]

4.8e-120

94.49

Show/hide

Query:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN
        MSSSMALFSPP HLSTLSSSL HRNSFSSIPFSSLRTRR+ S SSLFTIRAAAEPEPAKS+TE+QESLPG NGAMAAAEEVEVVTKFEDAKWINGTWDLN
Subjt:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN

Query:  QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA
        QFRKHGSIDWDSVIDSEARRRKWVEKN ESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVG+ GNF CKTLLFVA
Subjt:  QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA

Query:  VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
        VVGVV IRKNEDIETLKKLIDETSLYDKQWRATWED
Subjt:  VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED

XP_023539962.1 light-harvesting complex-like protein 3 isotype 2, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]

1.1e-119

94.49

Show/hide

Query:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN
        MSSSMAL SPP HLSTLSSSL +RNSFSSIPFSSLRTRRS S SSLFTIRAAA+PEPAKSVTEEQESL GTNGAMA AEEVEVVTKFEDAKWINGTWDLN
Subjt:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN

Query:  QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA
        QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVG+VG+MGNFFCKTLLFVA
Subjt:  QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA

Query:  VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
        VVGVV IR+NEDIETLKKLIDETSLYDKQWRATWED
Subjt:  VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5D8 Uncharacterized protein

7.6e-95

73.26

Show/hide

Query:  SSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRR-SASCSSLFTIRAAA----------------------EPEPAKSVTEEQESLPGTNGAMAAAE
        SSMALFSP  HLST S S  H   FS  PFSSLRTR  S+S SSLFTIRA A                      +PEPAK   EEQESL GTNG++AAAE
Subjt:  SSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRR-SASCSSLFTIRAAA----------------------EPEPAKSVTEEQESLPGTNGAMAAAE

Query:  E-VEVVTKFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDS
        E VEVV+KFED KW+NGTWDLNQF+K+GS DWD+VID+EARRRKW+E N ESSSNEDPVVF TSI+PWWAWIKRYHLPEAE LNGRAAMVGFFMAYFVDS
Subjt:  E-VEVVTKFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDS

Query:  LSGVGVVGEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
        L+GVG+VG+MGNFFCKTLLFVAVVGV+ IRKNEDIETLKKLIDET+ YDKQW+ATW+D
Subjt:  LSGVGVVGEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED

A0A1S3BLD8 uncharacterized protein LOC103490842

5.4e-93

72.73

Show/hide

Query:  SSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRR--SASCSSLFTIRAAAE----------------PEPAKSVTEEQESLPGTNGAMAAAEE-VEV
        SSMALFSP  HLSTLS S  H   FS  PFSSLRTR   S+S SSLFTIRA A+                P   K     +ESL GTNG++AAAEE VEV
Subjt:  SSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRR--SASCSSLFTIRAAAE----------------PEPAKSVTEEQESLPGTNGAMAAAEE-VEV

Query:  VTKFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVG
        V+KFED KW+NGTWDLNQF+K+GS DWD+VID+EARRRKW+E N ESSSNEDPVVF TSI+PWWAWIKRYHLPEAE LNGRAAMVGFFMAYFVDSL+GVG
Subjt:  VTKFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVG

Query:  VVGEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
        +VG+MGNFFCKTLLFVAVVGV+ IRKNEDIETLKKLIDET+ YDKQW+ATW+D
Subjt:  VVGEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED

A0A5A7TG76 Uncharacterized protein

5.4e-93

72.73

Show/hide

Query:  SSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRR--SASCSSLFTIRAAAE----------------PEPAKSVTEEQESLPGTNGAMAAAEE-VEV
        SSMALFSP  HLSTLS S  H   FS  PFSSLRTR   S+S SSLFTIRA A+                P   K     +ESL GTNG++AAAEE VEV
Subjt:  SSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRR--SASCSSLFTIRAAAE----------------PEPAKSVTEEQESLPGTNGAMAAAEE-VEV

Query:  VTKFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVG
        V+KFED KW+NGTWDLNQF+K+GS DWD+VID+EARRRKW+E N ESSSNEDPVVF TSI+PWWAWIKRYHLPEAE LNGRAAMVGFFMAYFVDSL+GVG
Subjt:  VTKFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVG

Query:  VVGEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
        +VG+MGNFFCKTLLFVAVVGV+ IRKNEDIETLKKLIDET+ YDKQW+ATW+D
Subjt:  VVGEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED

A0A6J1F3X0 light-harvesting complex-like protein 3 isotype 2, chloroplastic

4.8e-126

97.88

Show/hide

Query:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN
        MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRS S SSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN
Subjt:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN

Query:  QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA
        QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVG+MGNFFCKTLLFVA
Subjt:  QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA

Query:  VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
        VVGVV IR+NEDIETLKKLIDETSLYDKQWRATWED
Subjt:  VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED

A0A6J1KTD1 light-harvesting complex-like protein 3 isotype 2, chloroplastic

2.3e-120

94.49

Show/hide

Query:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN
        MSSSMALFSPP HLSTLSSSL HRNSFSSIPFSSLRTRR+ S SSLFTIRAAAEPEPAKS+TE+QESLPG NGAMAAAEEVEVVTKFEDAKWINGTWDLN
Subjt:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLN

Query:  QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA
        QFRKHGSIDWDSVIDSEARRRKWVEKN ESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVG+ GNF CKTLLFVA
Subjt:  QFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVA

Query:  VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
        VVGVV IRKNEDIETLKKLIDETSLYDKQWRATWED
Subjt:  VVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED

SwissProt top hits

e value

%identity

Alignment

Q6NKS4 Light-harvesting complex-like protein 3 isotype 2, chloroplastic

1.1e-71

58.1

Show/hide

Query:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRR-------SASCSSLFTIRAAAEPEPAKSVTEE-------QESLPGTNGAM---AAAEEVEV
        MS SMALFSPP     +SSSL + N    I  S L T+R        AS  +  T      P+PA    EE       + S    NGA+   A     E 
Subjt:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRR-------SASCSSLFTIRAAAEPEPAKSVTEE-------QESLPGTNGAM---AAAEEVEV

Query:  VTKFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVG
        V K+++AKW+NGTWDL QF K G  DWDSVI SEA+RRKW+E N E++SN++ VVF TSIIPWWAW+KRYHLPEAE LNGRAAM+GFFMAYFVDSL+GVG
Subjt:  VTKFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVG

Query:  VVGEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
        +V +MGNFFCKTLLFVAV GV+FIRKNED++ LK L DET+LYDKQW+A W++
Subjt:  VVGEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED

Q9SYX1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic

1.5e-71

57.77

Show/hide

Query:  MALFSPPFHLSTLSS-SLCHRNSF---SSIPFSSLRTRRSASCSSLFTIRAAAE---PEPAKSVTEE----------QESLPGTNGAMAAAE--EVEVVT
        MALFSPP   S+L + +   + SF   SS  FS L   R++S S   +  AA     PEP + + +E          +E+    N A+   E    E V 
Subjt:  MALFSPPFHLSTLSS-SLCHRNSF---SSIPFSSLRTRRSASCSSLFTIRAAAE---PEPAKSVTEE----------QESLPGTNGAMAAAE--EVEVVT

Query:  KFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVV
        KF+DA+WINGTWDL QF K G  DWDSVI +EA+RRKW+E+N E++SN++PV+F TSIIPWWAWIKRYHLPEAE LNGRAAM+GFFMAYFVDSL+GVG+V
Subjt:  KFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVV

Query:  GEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
         +MGNFFCKTLLFVAV GV+FIRKNED++ LK L DET+LYDKQW+A W++
Subjt:  GEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED

Arabidopsis top hits

e value

%identity

Alignment

AT4G17600.1 Chlorophyll A-B binding family protein

1.0e-72

57.77

Show/hide

Query:  MALFSPPFHLSTLSS-SLCHRNSF---SSIPFSSLRTRRSASCSSLFTIRAAAE---PEPAKSVTEE----------QESLPGTNGAMAAAE--EVEVVT
        MALFSPP   S+L + +   + SF   SS  FS L   R++S S   +  AA     PEP + + +E          +E+    N A+   E    E V 
Subjt:  MALFSPPFHLSTLSS-SLCHRNSF---SSIPFSSLRTRRSASCSSLFTIRAAAE---PEPAKSVTEE----------QESLPGTNGAMAAAE--EVEVVT

Query:  KFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVV
        KF+DA+WINGTWDL QF K G  DWDSVI +EA+RRKW+E+N E++SN++PV+F TSIIPWWAWIKRYHLPEAE LNGRAAM+GFFMAYFVDSL+GVG+V
Subjt:  KFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVV

Query:  GEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
         +MGNFFCKTLLFVAV GV+FIRKNED++ LK L DET+LYDKQW+A W++
Subjt:  GEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED

AT5G47110.1 Chlorophyll A-B binding family protein

8.0e-73

58.1

Show/hide

Query:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRR-------SASCSSLFTIRAAAEPEPAKSVTEE-------QESLPGTNGAM---AAAEEVEV
        MS SMALFSPP     +SSSL + N    I  S L T+R        AS  +  T      P+PA    EE       + S    NGA+   A     E 
Subjt:  MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRR-------SASCSSLFTIRAAAEPEPAKSVTEE-------QESLPGTNGAM---AAAEEVEV

Query:  VTKFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVG
        V K+++AKW+NGTWDL QF K G  DWDSVI SEA+RRKW+E N E++SN++ VVF TSIIPWWAW+KRYHLPEAE LNGRAAM+GFFMAYFVDSL+GVG
Subjt:  VTKFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVG

Query:  VVGEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED
        +V +MGNFFCKTLLFVAV GV+FIRKNED++ LK L DET+LYDKQW+A W++
Subjt:  VVGEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLIDETSLYDKQWRATWED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTCTTCCATGGCTTTGTTTTCTCCTCCTTTCCATCTTTCCACTCTCTCTTCTTCATTATGCCACAGAAATTCCTTCTCCTCCATACCTTTTTCTTCTCTCAGAAC
CAGAAGAAGCGCTTCTTGTTCCTCTCTTTTCACCATCAGAGCCGCTGCGGAACCGGAGCCGGCTAAGTCCGTAACGGAAGAGCAGGAGAGCCTCCCCGGAACAAATGGCG
CGATGGCGGCTGCTGAAGAAGTGGAGGTCGTTACCAAATTTGAAGACGCTAAGTGGATTAATGGAACTTGGGATCTGAATCAGTTCCGGAAACACGGAAGTATCGACTGG
GATTCTGTTATTGATTCCGAGGCTAGGAGGAGAAAATGGGTGGAAAAGAATCGAGAATCATCAAGTAATGAGGATCCCGTGGTGTTTGGGACATCCATAATTCCATGGTG
GGCTTGGATTAAGCGGTACCATCTCCCTGAAGCTGAGACACTCAATGGGCGTGCAGCGATGGTGGGGTTCTTCATGGCTTACTTTGTTGATAGCTTGAGTGGGGTAGGGG
TAGTAGGTGAAATGGGCAATTTCTTCTGCAAAACTCTGTTGTTTGTGGCTGTGGTGGGAGTTGTTTTCATCAGAAAGAACGAAGATATTGAGACTCTGAAGAAGTTGATT
GATGAGACAAGCTTGTATGACAAGCAATGGCGAGCAACTTGGGAGGATTAA

mRNA sequence

Show/hide mRNA sequence

CAAGGTTGAGGAGAGGCGCACTGTACTCTGTTCTGCGTCACAATGTCTTCTTCCATGGCTTTGTTTTCTCCTCCTTTCCATCTTTCCACTCTCTCTTCTTCATTATGCCA
CAGAAATTCCTTCTCCTCCATACCTTTTTCTTCTCTCAGAACCAGAAGAAGCGCTTCTTGTTCCTCTCTTTTCACCATCAGAGCCGCTGCGGAACCGGAGCCGGCTAAGT
CCGTAACGGAAGAGCAGGAGAGCCTCCCCGGAACAAATGGCGCGATGGCGGCTGCTGAAGAAGTGGAGGTCGTTACCAAATTTGAAGACGCTAAGTGGATTAATGGAACT
TGGGATCTGAATCAGTTCCGGAAACACGGAAGTATCGACTGGGATTCTGTTATTGATTCCGAGGCTAGGAGGAGAAAATGGGTGGAAAAGAATCGAGAATCATCAAGTAA
TGAGGATCCCGTGGTGTTTGGGACATCCATAATTCCATGGTGGGCTTGGATTAAGCGGTACCATCTCCCTGAAGCTGAGACACTCAATGGGCGTGCAGCGATGGTGGGGT
TCTTCATGGCTTACTTTGTTGATAGCTTGAGTGGGGTAGGGGTAGTAGGTGAAATGGGCAATTTCTTCTGCAAAACTCTGTTGTTTGTGGCTGTGGTGGGAGTTGTTTTC
ATCAGAAAGAACGAAGATATTGAGACTCTGAAGAAGTTGATTGATGAGACAAGCTTGTATGACAAGCAATGGCGAGCAACTTGGGAGGATTAAGCTGAAGAGGTTGATTA
TCTATATCTATAATTTCGCTTTAGATTCCTTTGTTTGTAGCTCAAAATCAAACACTTTTCTTATAGCTCAAGAAAACCCAAGTTTTTAGTCCAATTTCCATTTC

Protein sequence

Show/hide protein sequence

MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSASCSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLNQFRKHGSIDW
DSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGEMGNFFCKTLLFVAVVGVVFIRKNEDIETLKKLI
DETSLYDKQWRATWED

Carg12045 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome