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Carg12046 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12046
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr05:9412543..9414193
RNA-Seq ExpressionCarg12046
SyntenyCarg12046
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030163.1 hypothetical protein SDJN02_08510, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-74100Show/hide
Query:  MKLKAKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPISLVNLRAKPKGARFTS
        MKLKAKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPISLVNLRAKPKGARFTS
Subjt:  MKLKAKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPISLVNLRAKPKGARFTS

Query:  CFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNANDNKRIRRIRLLKFTCT
        CFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNANDNKRIRRIRLLKFTCT
Subjt:  CFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNANDNKRIRRIRLLKFTCT

XP_008448775.1 PREDICTED: uncharacterized protein LOC103490841 isoform X1 [Cucumis melo]1.6e-4764.29Show/hide
Query:  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPI--------------------
        A VS+ENKVLV+VY+E+QEPR+ VNR QR +VNK VRNQWK++ ANKGYNRRTELLKYSQRLRKSA+SPASPY+ TPEPI                    
Subjt:  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPI--------------------

Query:  -SLVNLRAKPKGARFTSCFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNAN-------------DNKRIRRIRLLKFTCT
         SLVNL  KPKG RFTSCFGNLIQRS KAL SFQPK  RQ QNQSSGSTKN N             D  + RRIRLL FTCT
Subjt:  -SLVNLRAKPKGARFTSCFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNAN-------------DNKRIRRIRLLKFTCT

XP_008448776.1 PREDICTED: uncharacterized protein LOC103490841 isoform X2 [Cucumis melo]1.2e-4765.91Show/hide
Query:  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPIS---------------LVNL
        A VS+ENKVLV+VY+E+QEPR+ VNR QR +VNK VRNQWK++ ANKGYNRRTELLKYSQRLRKSA+SPASPY+ TPEPI                LVNL
Subjt:  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPIS---------------LVNL

Query:  RAKPKGARFTSCFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNAN-------------DNKRIRRIRLLKFTCT
          KPKG RFTSCFGNLIQRS KAL SFQPK  RQ QNQSSGSTKN N             D  + RRIRLL FTCT
Subjt:  RAKPKGARFTSCFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNAN-------------DNKRIRRIRLLKFTCT

XP_011650374.1 uncharacterized protein LOC105434777 isoform X1 [Cucumis sativus]9.2e-4864.29Show/hide
Query:  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPI--------------------
        A VS+ENKVLV+VY+E+QEPR+ VNR QRD+VNK VRNQWK++ ANKGYNRRTELLKYSQRLRKSA+SPASPY+ TPEPI                    
Subjt:  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPI--------------------

Query:  -SLVNLRAKPKGARFTSCFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNANDNKRIR-------------RIRLLKFTCT
         SLVNL  KPKG RFTSCFGNLIQRS KALTSFQPK  RQ QNQSSGSTK  N+ K                RIRLL FTCT
Subjt:  -SLVNLRAKPKGARFTSCFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNANDNKRIR-------------RIRLLKFTCT

XP_011650375.1 uncharacterized protein LOC105434777 isoform X2 [Cucumis sativus]7.1e-4865.91Show/hide
Query:  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPIS---------------LVNL
        A VS+ENKVLV+VY+E+QEPR+ VNR QRD+VNK VRNQWK++ ANKGYNRRTELLKYSQRLRKSA+SPASPY+ TPEPI                LVNL
Subjt:  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPIS---------------LVNL

Query:  RAKPKGARFTSCFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNANDNKRIR-------------RIRLLKFTCT
          KPKG RFTSCFGNLIQRS KALTSFQPK  RQ QNQSSGSTK  N+ K                RIRLL FTCT
Subjt:  RAKPKGARFTSCFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNANDNKRIR-------------RIRLLKFTCT

TrEMBL top hitse value%identityAlignment
A0A061GAZ6 Uncharacterized protein1.9e-0639.29Show/hide
Query:  RENKVLVSVYTERQEPRVAVNRV---QRDDVNKTVRNQW-KKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPIS---------LVNLRAKPKG
        ++  VLV+VY E+    V+ N     Q   ++ T++ +  K   A KGYNRR ELL YSQRLR+SA+S AS  L + +P+S         +V+++ KPK 
Subjt:  RENKVLVSVYTERQEPRVAVNRV---QRDDVNKTVRNQW-KKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPIS---------LVNLRAKPKG

Query:  ARFTSCFGN---LIQRSRKALTSFQPKNKRQNQNQSSGST
        +R  +CF N   LI R  ++LT+ Q K K   + Q  GST
Subjt:  ARFTSCFGN---LIQRSRKALTSFQPKNKRQNQNQSSGST

A0A0A0L6R0 Uncharacterized protein5.5e-4669.23Show/hide
Query:  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPI--------------------
        A VS+ENKVLV+VY+E+QEPR+ VNR QRD+VNK VRNQWK++ ANKGYNRRTELLKYSQRLRKSA+SPASPY+ TPEPI                    
Subjt:  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPI--------------------

Query:  -SLVNLRAKPKGARFTSCFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNANDNK
         SLVNL  KPKG RFTSCFGNLIQRS KALTSFQPK  RQ QNQSSGSTK  N+ K
Subjt:  -SLVNLRAKPKGARFTSCFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNANDNK

A0A1S3BKH3 uncharacterized protein LOC103490841 isoform X17.6e-4864.29Show/hide
Query:  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPI--------------------
        A VS+ENKVLV+VY+E+QEPR+ VNR QR +VNK VRNQWK++ ANKGYNRRTELLKYSQRLRKSA+SPASPY+ TPEPI                    
Subjt:  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPI--------------------

Query:  -SLVNLRAKPKGARFTSCFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNAN-------------DNKRIRRIRLLKFTCT
         SLVNL  KPKG RFTSCFGNLIQRS KAL SFQPK  RQ QNQSSGSTKN N             D  + RRIRLL FTCT
Subjt:  -SLVNLRAKPKGARFTSCFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNAN-------------DNKRIRRIRLLKFTCT

A0A1S3BL45 uncharacterized protein LOC103490841 isoform X25.8e-4865.91Show/hide
Query:  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPIS---------------LVNL
        A VS+ENKVLV+VY+E+QEPR+ VNR QR +VNK VRNQWK++ ANKGYNRRTELLKYSQRLRKSA+SPASPY+ TPEPI                LVNL
Subjt:  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPIS---------------LVNL

Query:  RAKPKGARFTSCFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNAN-------------DNKRIRRIRLLKFTCT
          KPKG RFTSCFGNLIQRS KAL SFQPK  RQ QNQSSGSTKN N             D  + RRIRLL FTCT
Subjt:  RAKPKGARFTSCFGNLIQRSRKALTSFQPKNKRQNQNQSSGSTKNAN-------------DNKRIRRIRLLKFTCT

A0A5A7TG76 Uncharacterized protein3.3e-2775.86Show/hide
Query:  KLKAKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPISLVN
        K++A VS+ENKVLV+VY+E+QEPR+ VNR QR +VNK VRNQWK++ ANKGYNRRTELLKYSQRLRKSA+SPASPY+ TPEPI L N
Subjt:  KLKAKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPISLVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTCAAGGCAAAGGTCTCAAGAGAGAACAAAGTGTTGGTGAGTGTGTATACAGAGAGGCAGGAACCAAGAGTAGCAGTAAATCGTGTCCAACGTGATGATGTGAA
CAAAACAGTGAGGAATCAGTGGAAGAAAGAAATAGCTAATAAAGGATACAATAGGAGAACTGAACTCCTTAAGTACTCTCAACGCCTGCGAAAATCTGCACAATCACCTG
CATCTCCATATCTTCCAACTCCGGAGCCAATTTCTCTCGTCAATCTTCGTGCAAAGCCCAAGGGTGCCAGATTTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTCGC
AAGGCTTTGACGAGTTTTCAACCAAAAAACAAGAGACAAAATCAGAACCAAAGCAGCGGATCTACCAAGAATGCTAATGATAATAAAAGAATTAGAAGGATAAGACTATT
GAAATTTACATGCACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACTCAAGGCAAAGGTCTCAAGAGAGAACAAAGTGTTGGTGAGTGTGTATACAGAGAGGCAGGAACCAAGAGTAGCAGTAAATCGTGTCCAACGTGATGATGTGAA
CAAAACAGTGAGGAATCAGTGGAAGAAAGAAATAGCTAATAAAGGATACAATAGGAGAACTGAACTCCTTAAGTACTCTCAACGCCTGCGAAAATCTGCACAATCACCTG
CATCTCCATATCTTCCAACTCCGGAGCCAATTTCTCTCGTCAATCTTCGTGCAAAGCCCAAGGGTGCCAGATTTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTCGC
AAGGCTTTGACGAGTTTTCAACCAAAAAACAAGAGACAAAATCAGAACCAAAGCAGCGGATCTACCAAGAATGCTAATGATAATAAAAGAATTAGAAGGATAAGACTATT
GAAATTTACATGCACTTAG
Protein sequenceShow/hide protein sequence
MKLKAKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPISLVNLRAKPKGARFTSCFGNLIQRSR
KALTSFQPKNKRQNQNQSSGSTKNANDNKRIRRIRLLKFTCT