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Carg12051 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12051
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr05:9476418..9477944
RNA-Seq ExpressionCarg12051
SyntenyCarg12051
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596892.1 hypothetical protein SDJN03_10072, partial [Cucurbita argyrosperma subsp. sororia]6.3e-4894.64Show/hide
Query:  MLSKNGKRRRGQKKFLCLIFGGIKWAGPVWWAFRDQSSVPFLRSLPLPSYSAAADAVLISFLSLISLSAAAA--AAVGLQLRIAGCTHRHFSVETNLTCD
        MLSKNGKRRRGQKKFLCLIFGGIKWAGPVWWAFRDQSSVPFLRSLPLPSYSAAADAVLISFLSLISLSAAAA  AAVGLQLRIAGCTHRHFSVETNLTCD
Subjt:  MLSKNGKRRRGQKKFLCLIFGGIKWAGPVWWAFRDQSSVPFLRSLPLPSYSAAADAVLISFLSLISLSAAAA--AAVGLQLRIAGCTHRHFSVETNLTCD

Query:  SSIVFQLISFNT
        SSIVFQL    T
Subjt:  SSIVFQLISFNT
KAG7030168.1 hypothetical protein SDJN02_08515, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-67100Show/hide
Query:  MLSKNGKRRRGQKKFLCLIFGGIKWAGPVWWAFRDQSSVPFLRSLPLPSYSAAADAVLISFLSLISLSAAAAAAVGLQLRIAGCTHRHFSVETNLTCDSS
        MLSKNGKRRRGQKKFLCLIFGGIKWAGPVWWAFRDQSSVPFLRSLPLPSYSAAADAVLISFLSLISLSAAAAAAVGLQLRIAGCTHRHFSVETNLTCDSS
Subjt:  MLSKNGKRRRGQKKFLCLIFGGIKWAGPVWWAFRDQSSVPFLRSLPLPSYSAAADAVLISFLSLISLSAAAAAAVGLQLRIAGCTHRHFSVETNLTCDSS

Query:  IVFQLISFNTVAKFEVLACVVSYETEHSLKNSSVFQ
        IVFQLISFNTVAKFEVLACVVSYETEHSLKNSSVFQ
Subjt:  IVFQLISFNTVAKFEVLACVVSYETEHSLKNSSVFQ
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCGAAAAATGGGAAGAGAAGGCGAGGGCAAAAGAAATTTCTTTGTTTGATCTTTGGGGGTATAAAATGGGCTGGGCCGGTTTGGTGGGCCTTTAGAGACCAATC
TTCTGTTCCTTTTCTCCGCTCTCTCCCTCTACCATCTTATTCTGCAGCCGCAGACGCCGTTCTAATTTCTTTCCTCTCTCTCATATCCCTCTCCGCCGCCGCCGCCGCCG
CCGTCGGCCTCCAGTTGCGGATCGCTGGATGCACTCATCGCCATTTCTCTGTTGAGACCAACCTCACTTGTGATTCCTCAATAGTTTTCCAGTTAATCAGCTTCAATACT
GTTGCAAAATTCGAAGTGTTGGCGTGTGTAGTTTCTTATGAGACTGAGCACAGTTTGAAGAATTCTAGTGTTTTTCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCGAAAAATGGGAAGAGAAGGCGAGGGCAAAAGAAATTTCTTTGTTTGATCTTTGGGGGTATAAAATGGGCTGGGCCGGTTTGGTGGGCCTTTAGAGACCAATC
TTCTGTTCCTTTTCTCCGCTCTCTCCCTCTACCATCTTATTCTGCAGCCGCAGACGCCGTTCTAATTTCTTTCCTCTCTCTCATATCCCTCTCCGCCGCCGCCGCCGCCG
CCGTCGGCCTCCAGTTGCGGATCGCTGGATGCACTCATCGCCATTTCTCTGTTGAGACCAACCTCACTTGTGATTCCTCAATAGTTTTCCAGTTAATCAGCTTCAATACT
GTTGCAAAATTCGAAGTGTTGGCGTGTGTAGTTTCTTATGAGACTGAGCACAGTTTGAAGAATTCTAGTGTTTTTCAGTGA
Protein sequenceShow/hide protein sequence
MLSKNGKRRRGQKKFLCLIFGGIKWAGPVWWAFRDQSSVPFLRSLPLPSYSAAADAVLISFLSLISLSAAAAAAVGLQLRIAGCTHRHFSVETNLTCDSSIVFQLISFNT
VAKFEVLACVVSYETEHSLKNSSVFQ