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Carg12080 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12080
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr05:9760972..9763337
RNA-Seq ExpressionCarg12080
SyntenyCarg12080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030197.1 hypothetical protein SDJN02_08544, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-144100Show/hide
Query:  MHLKQQASLKKLDELMISTKRLQVGCTFPKAQLDATVWCLLLTPWLIKLLWQPQMVHLNAPMQLNPPLWLQTTQPGLLAFEMEQQAIAERSSRFCRSVAE
        MHLKQQASLKKLDELMISTKRLQVGCTFPKAQLDATVWCLLLTPWLIKLLWQPQMVHLNAPMQLNPPLWLQTTQPGLLAFEMEQQAIAERSSRFCRSVAE
Subjt:  MHLKQQASLKKLDELMISTKRLQVGCTFPKAQLDATVWCLLLTPWLIKLLWQPQMVHLNAPMQLNPPLWLQTTQPGLLAFEMEQQAIAERSSRFCRSVAE

Query:  NVPEFVFDNFKGNVVLLQKLQLSGRHCSDLFISSKSFSASSAKPRSDYGRISNVIKLNPTTNHLISKIFDKLKLPTVPQRLHSHIVEDSLHRKQILGLDP
        NVPEFVFDNFKGNVVLLQKLQLSGRHCSDLFISSKSFSASSAKPRSDYGRISNVIKLNPTTNHLISKIFDKLKLPTVPQRLHSHIVEDSLHRKQILGLDP
Subjt:  NVPEFVFDNFKGNVVLLQKLQLSGRHCSDLFISSKSFSASSAKPRSDYGRISNVIKLNPTTNHLISKIFDKLKLPTVPQRLHSHIVEDSLHRKQILGLDP

Query:  IEEQMSFLPWLQAIENQKGIFFSGWMWDFLKSRHESTFRGFTGVELVGKGFKVSAFGVI
        IEEQMSFLPWLQAIENQKGIFFSGWMWDFLKSRHESTFRGFTGVELVGKGFKVSAFGVI
Subjt:  IEEQMSFLPWLQAIENQKGIFFSGWMWDFLKSRHESTFRGFTGVELVGKGFKVSAFGVI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTCAAGCAGCAAGCCAGCCTGAAGAAATTGGACGAACTCATGATATCGACGAAAAGGCTTCAAGTTGGATGCACGTTCCCAAAGGCGCAACTAGATGCCACAGT
TTGGTGCCTGCTACTAACCCCATGGCTGATTAAGCTGTTGTGGCAGCCACAGATGGTTCACTTGAACGCACCCATGCAACTAAATCCTCCCTTGTGGCTACAAACCACCC
AGCCCGGTCTTCTTGCATTTGAAATGGAGCAGCAAGCAATTGCAGAAAGGTCGTCGCGCTTCTGTCGCAGTGTTGCCGAGAATGTTCCTGAATTCGTCTTTGACAACTTC
AAAGGTAATGTCGTTTTGTTGCAGAAGCTCCAGCTATCTGGTCGACATTGCTCCGACCTCTTCATCTCTTCAAAGAGCTTCTCAGCTTCCTCCGCCAAACCAAGAAGTGA
TTATGGTAGAATAAGTAATGTTATCAAGCTCAATCCCACTACTAATCATCTCATTAGCAAGATCTTCGATAAGCTGAAACTGCCTACCGTACCTCAAAGACTTCATAGCC
ACATTGTAGAAGATAGTCTCCATAGGAAACAGATTCTGGGTCTTGATCCAATTGAAGAACAGATGAGTTTTCTGCCATGGCTTCAAGCTATTGAGAATCAGAAGGGCATT
TTCTTTAGTGGGTGGATGTGGGATTTCCTCAAGAGCCGCCATGAAAGCACTTTCAGAGGATTCACAGGCGTTGAGCTTGTGGGCAAAGGTTTTAAGGTCTCGGCGTTTGG
GGTTATATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATCTCAAGCAGCAAGCCAGCCTGAAGAAATTGGACGAACTCATGATATCGACGAAAAGGCTTCAAGTTGGATGCACGTTCCCAAAGGCGCAACTAGATGCCACAGT
TTGGTGCCTGCTACTAACCCCATGGCTGATTAAGCTGTTGTGGCAGCCACAGATGGTTCACTTGAACGCACCCATGCAACTAAATCCTCCCTTGTGGCTACAAACCACCC
AGCCCGGTCTTCTTGCATTTGAAATGGAGCAGCAAGCAATTGCAGAAAGGTCGTCGCGCTTCTGTCGCAGTGTTGCCGAGAATGTTCCTGAATTCGTCTTTGACAACTTC
AAAGGTAATGTCGTTTTGTTGCAGAAGCTCCAGCTATCTGGTCGACATTGCTCCGACCTCTTCATCTCTTCAAAGAGCTTCTCAGCTTCCTCCGCCAAACCAAGAAGTGA
TTATGGTAGAATAAGTAATGTTATCAAGCTCAATCCCACTACTAATCATCTCATTAGCAAGATCTTCGATAAGCTGAAACTGCCTACCGTACCTCAAAGACTTCATAGCC
ACATTGTAGAAGATAGTCTCCATAGGAAACAGATTCTGGGTCTTGATCCAATTGAAGAACAGATGAGTTTTCTGCCATGGCTTCAAGCTATTGAGAATCAGAAGGGCATT
TTCTTTAGTGGGTGGATGTGGGATTTCCTCAAGAGCCGCCATGAAAGCACTTTCAGAGGATTCACAGGCGTTGAGCTTGTGGGCAAAGGTTTTAAGGTCTCGGCGTTTGG
GGTTATATGA
Protein sequenceShow/hide protein sequence
MHLKQQASLKKLDELMISTKRLQVGCTFPKAQLDATVWCLLLTPWLIKLLWQPQMVHLNAPMQLNPPLWLQTTQPGLLAFEMEQQAIAERSSRFCRSVAENVPEFVFDNF
KGNVVLLQKLQLSGRHCSDLFISSKSFSASSAKPRSDYGRISNVIKLNPTTNHLISKIFDKLKLPTVPQRLHSHIVEDSLHRKQILGLDPIEEQMSFLPWLQAIENQKGI
FFSGWMWDFLKSRHESTFRGFTGVELVGKGFKVSAFGVI