; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12084 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12084
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGATA transcription factor 15-like
Genome locationCarg_Chr05:9784359..9784860
RNA-Seq ExpressionCarg12084
SyntenyCarg12084
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046674.1 GATA transcription factor 15-like [Cucumis melo var. makuwa]1.4e-3962.99Show/hide
Query:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK----------NSNGGVNKSVNGKKV--
        MAF +N   D S STFNPS + A+S QGL  +E +KQR C HCR TRTPLWRAGPAGPRSLCNACGIRYRK+K          N+N   NK   GKK+  
Subjt:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK----------NSNGGVNKSVNGKKV--

Query:  -----VRVVGLGREIMLH-RATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS
             +RVV LGREIM+H R T AM +NG AE+IGEEEQ AAMLLMALSSGYVS
Subjt:  -----VRVVGLGREIMLH-RATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS

XP_011659382.1 GATA transcription factor 15 [Cucumis sativus]4.8e-4065.36Show/hide
Query:  MAFFINNHPDLSGSTFNPSSLM-AISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK---NSNGGVNKSVN-----GKKV---
        +AF +N   DLS STFNP SLM A+S +GLL +E +KQR C HCR TRTPLWRAGPAGPRSLCNACGIRYRK+K   N+NGGVN + N     GKK+   
Subjt:  MAFFINNHPDLSGSTFNPSSLM-AISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK---NSNGGVNKSVN-----GKKV---

Query:  -----VRVVGLGREIMLHRATAAMA-ENGGAETIGEEEQAAAMLLMALSSGYV
             VRVV LGREIM+HR T AM  +N  AE+IGEEEQ AA+LLMALSSGYV
Subjt:  -----VRVVGLGREIMLHRATAAMA-ENGGAETIGEEEQAAAMLLMALSSGYV

XP_022959984.1 GATA transcription factor 15-like [Cucurbita moschata]3.4e-70100Show/hide
Query:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIML
        MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIML
Subjt:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIML

Query:  HRATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS
        HRATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS
Subjt:  HRATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS

XP_023004687.1 GATA transcription factor 15-like [Cucurbita maxima]5.5e-6897.06Show/hide
Query:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIML
        MAFFINNHPDLSGSTFNPSSLMAISNQGLLC EPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN+NGGVNKS NGKKVVRVVGLGREIML
Subjt:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIML

Query:  HRATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS
        HR TAAMAENGGAETIGEEEQAAAMLLMALSSGYVS
Subjt:  HRATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS

XP_023515141.1 GATA transcription factor 15-like [Cucurbita pepo subsp. pepo]5.5e-6897.79Show/hide
Query:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIML
        MAFFINNHPDLSGSTFNPSSLMAISN GLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKS NGKKVVRVV LGREIML
Subjt:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIML

Query:  HRATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS
        HRATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS
Subjt:  HRATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS

TrEMBL top hitse value%identityAlignment
A0A0A0K6B1 GATA-type domain-containing protein2.3e-4065.36Show/hide
Query:  MAFFINNHPDLSGSTFNPSSLM-AISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK---NSNGGVNKSVN-----GKKV---
        +AF +N   DLS STFNP SLM A+S +GLL +E +KQR C HCR TRTPLWRAGPAGPRSLCNACGIRYRK+K   N+NGGVN + N     GKK+   
Subjt:  MAFFINNHPDLSGSTFNPSSLM-AISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK---NSNGGVNKSVN-----GKKV---

Query:  -----VRVVGLGREIMLHRATAAMA-ENGGAETIGEEEQAAAMLLMALSSGYV
             VRVV LGREIM+HR T AM  +N  AE+IGEEEQ AA+LLMALSSGYV
Subjt:  -----VRVVGLGREIMLHRATAAMA-ENGGAETIGEEEQAAAMLLMALSSGYV

A0A1S3BSR7 GATA transcription factor 15-like2.0e-3961.39Show/hide
Query:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK--------------NSNGGVNKSVNGK
        MAF +N   D S STFNPS + A+S QGL  +E +KQR C HCR TRTPLWRAGPAGPRSLCNACGIRYRK+K              N+N   NK   GK
Subjt:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK--------------NSNGGVNKSVNGK

Query:  KV-------VRVVGLGREIMLH-RATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS
        K+       +RVV LGREIM+H R T AM +NG AE+IGEEEQ AAMLLMALSSGYVS
Subjt:  KV-------VRVVGLGREIMLH-RATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS

A0A5A7TUD0 GATA transcription factor 15-like6.8e-4062.99Show/hide
Query:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK----------NSNGGVNKSVNGKKV--
        MAF +N   D S STFNPS + A+S QGL  +E +KQR C HCR TRTPLWRAGPAGPRSLCNACGIRYRK+K          N+N   NK   GKK+  
Subjt:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK----------NSNGGVNKSVNGKKV--

Query:  -----VRVVGLGREIMLH-RATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS
             +RVV LGREIM+H R T AM +NG AE+IGEEEQ AAMLLMALSSGYVS
Subjt:  -----VRVVGLGREIMLH-RATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS

A0A6J1H9M3 GATA transcription factor 15-like1.7e-70100Show/hide
Query:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIML
        MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIML
Subjt:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIML

Query:  HRATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS
        HRATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS
Subjt:  HRATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS

A0A6J1KR45 GATA transcription factor 15-like2.7e-6897.06Show/hide
Query:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIML
        MAFFINNHPDLSGSTFNPSSLMAISNQGLLC EPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN+NGGVNKS NGKKVVRVVGLGREIML
Subjt:  MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIML

Query:  HRATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS
        HR TAAMAENGGAETIGEEEQAAAMLLMALSSGYVS
Subjt:  HRATAAMAENGGAETIGEEEQAAAMLLMALSSGYVS

SwissProt top hitse value%identityAlignment
Q5HZ36 GATA transcription factor 211.2e-0965.79Show/hide
Query:  RTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNS
        R C  C TT+TPLWR+GP GP+SLCNACGIR RK + +
Subjt:  RTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNS

Q6YW48 Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 17.1e-1060.87Show/hide
Query:  RTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN-----SNGG
        R C  C TT+TPLWR+GP GP+SLCNACGIR RK +      +NGG
Subjt:  RTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN-----SNGG

Q8LC59 GATA transcription factor 232.4e-1034.62Show/hide
Query:  RTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIMLHRATAAMAENGGA-----ETIGEEEQAAAMLLMALSS
        R C  C+TT+TP+WR GP GP+SLCNACGIR+RK + S             + ++   + +   +     + +GG       ++ EEEQAA  LL+   S
Subjt:  RTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIMLHRATAAMAENGGA-----ETIGEEEQAAAMLLMALSS

Query:  GYVS
          ++
Subjt:  GYVS

Q8LG10 GATA transcription factor 151.9e-1544.8Show/hide
Query:  SSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRK------------LKNSNGGVNKSVNGKKVVRVVGLGREIMLHRATAA
        SS  AISN+         +++C  C T++TPLWR GPAGP+SLCNACGIR RK             K  +   N         R++ LGRE+M+ R+T  
Subjt:  SSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRK------------LKNSNGGVNKSVNGKKVVRVVGLGREIMLHRATAA

Query:  MAENGGAETIGEEEQAAAMLLMALS
         AEN     +GEEEQ AA+LLMALS
Subjt:  MAENGGAETIGEEEQAAAMLLMALS

Q9FJ10 GATA transcription factor 168.9e-1343.75Show/hide
Query:  KQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRK------------LKNSNGGVNKSVNGKKVVRVVGLGREIMLHRATAAMAENGGAETIGEEEQAA
        K++TC  C T++TPLWR GP GP+SLCNACGIR RK             K+S+GG N+         ++ LG   +  R+T         + +GEEEQ A
Subjt:  KQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRK------------LKNSNGGVNKSVNGKKVVRVVGLGREIMLHRATAAMAENGGAETIGEEEQAA

Query:  AMLLMALSSGYV
        A+LLMALS G V
Subjt:  AMLLMALSSGYV

Arabidopsis top hitse value%identityAlignment
AT3G06740.1 GATA transcription factor 151.4e-1644.8Show/hide
Query:  SSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRK------------LKNSNGGVNKSVNGKKVVRVVGLGREIMLHRATAA
        SS  AISN+         +++C  C T++TPLWR GPAGP+SLCNACGIR RK             K  +   N         R++ LGRE+M+ R+T  
Subjt:  SSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRK------------LKNSNGGVNKSVNGKKVVRVVGLGREIMLHRATAA

Query:  MAENGGAETIGEEEQAAAMLLMALS
         AEN     +GEEEQ AA+LLMALS
Subjt:  MAENGGAETIGEEEQAAAMLLMALS

AT4G26150.1 cytokinin-responsive gata factor 11.1e-1065.79Show/hide
Query:  RTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNS
        R C  C TT+TPLWR+GP GP+SLCNACGIR RK + +
Subjt:  RTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNS

AT5G26930.1 GATA transcription factor 231.7e-1134.62Show/hide
Query:  RTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIMLHRATAAMAENGGA-----ETIGEEEQAAAMLLMALSS
        R C  C+TT+TP+WR GP GP+SLCNACGIR+RK + S             + ++   + +   +     + +GG       ++ EEEQAA  LL+   S
Subjt:  RTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIMLHRATAAMAENGGA-----ETIGEEEQAAAMLLMALSS

Query:  GYVS
          ++
Subjt:  GYVS

AT5G49300.1 GATA transcription factor 166.4e-1443.75Show/hide
Query:  KQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRK------------LKNSNGGVNKSVNGKKVVRVVGLGREIMLHRATAAMAENGGAETIGEEEQAA
        K++TC  C T++TPLWR GP GP+SLCNACGIR RK             K+S+GG N+         ++ LG   +  R+T         + +GEEEQ A
Subjt:  KQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRK------------LKNSNGGVNKSVNGKKVVRVVGLGREIMLHRATAAMAENGGAETIGEEEQAA

Query:  AMLLMALSSGYV
        A+LLMALS G V
Subjt:  AMLLMALSSGYV

AT5G56860.1 GATA type zinc finger transcription factor family protein8.6e-1165.79Show/hide
Query:  RTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNS
        R C  C TT+TPLWR+GP GP+SLCNACGIR RK + +
Subjt:  RTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTCTTCATCAACAACCATCCCGATCTCTCTGGCTCGACCTTCAATCCATCGTCTTTAATGGCGATTTCGAACCAGGGTCTACTCTGTATCGAGCCGCAGAAACA
GAGGACCTGTCACCACTGTCGCACCACCAGAACCCCCCTCTGGAGAGCCGGTCCTGCCGGCCCAAGGTCGCTGTGCAATGCGTGTGGGATTAGATACAGGAAGCTGAAGA
ACAGTAATGGCGGAGTGAATAAGAGTGTTAATGGGAAGAAAGTGGTGAGAGTGGTTGGTTTGGGGAGAGAGATAATGCTGCATAGAGCGACGGCGGCGATGGCGGAAAAT
GGAGGTGCAGAGACGATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTCATGGCTCTATCTTCCGGCTATGTATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTCTTCATCAACAACCATCCCGATCTCTCTGGCTCGACCTTCAATCCATCGTCTTTAATGGCGATTTCGAACCAGGGTCTACTCTGTATCGAGCCGCAGAAACA
GAGGACCTGTCACCACTGTCGCACCACCAGAACCCCCCTCTGGAGAGCCGGTCCTGCCGGCCCAAGGTCGCTGTGCAATGCGTGTGGGATTAGATACAGGAAGCTGAAGA
ACAGTAATGGCGGAGTGAATAAGAGTGTTAATGGGAAGAAAGTGGTGAGAGTGGTTGGTTTGGGGAGAGAGATAATGCTGCATAGAGCGACGGCGGCGATGGCGGAAAAT
GGAGGTGCAGAGACGATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTCATGGCTCTATCTTCCGGCTATGTATCATAA
Protein sequenceShow/hide protein sequence
MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNSNGGVNKSVNGKKVVRVVGLGREIMLHRATAAMAEN
GGAETIGEEEQAAAMLLMALSSGYVS