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Carg12085 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12085
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionH15 domain-containing protein
Genome locationCarg_Chr05:9787885..9788277
RNA-Seq ExpressionCarg12085
SyntenyCarg12085
Gene Ontology termsGO:0043229 - intracellular organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030202.1 hypothetical protein SDJN02_08549, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-65100Show/hide
Query:  MEGVSVGRGRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIY
        MEGVSVGRGRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIY
Subjt:  MEGVSVGRGRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIY

Query:  KSLVVAQARLPPPESVRPSWVGGRLPAVAE
        KSLVVAQARLPPPESVRPSWVGGRLPAVAE
Subjt:  KSLVVAQARLPPPESVRPSWVGGRLPAVAE

XP_023004877.1 uncharacterized protein LOC111498056 [Cucurbita maxima]9.9e-5993.08Show/hide
Query:  MEGVSVGRGRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIY
        MEGVSVGRGRRKTVQLGA GGKRR+VWQFKV  KLRRLRRLPSLKKLLIWLRDSYMNAMLA ASSRVVG GGG+GDGVW GAGGRATLKEYDEEMITEIY
Subjt:  MEGVSVGRGRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIY

Query:  KSLVVAQARLPPPESVRPSWVGGRLPAVAE
        KSLVVAQ RLPPPESVRPSWVGGRLPAVAE
Subjt:  KSLVVAQARLPPPESVRPSWVGGRLPAVAE

XP_023514548.1 uncharacterized protein LOC111778805 [Cucurbita pepo subsp. pepo]6.6e-6396.92Show/hide
Query:  MEGVSVGRGRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIY
        MEGV VGRGRRKTVQLGA GGKRRNVWQFKVSPKLRRLRRLPSLKKLL+WLRDSYMNAMLAFASSRVVGCGGGSGDGVW GAGGRATLKEYDEEMITEIY
Subjt:  MEGVSVGRGRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIY

Query:  KSLVVAQARLPPPESVRPSWVGGRLPAVAE
        KSLVVAQARLPPPESVRPSWVGGRLPAVAE
Subjt:  KSLVVAQARLPPPESVRPSWVGGRLPAVAE

XP_038897064.1 uncharacterized protein LOC120085238 isoform X1 [Benincasa hispida]9.0e-4476.74Show/hide
Query:  SVGRGRRKTVQLGALGG-KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVV--GCGGGSGDGVWAGAGGRATLKEYDEEMITEIYK
        SVGR + +TVQLGA GG +RR +W+ K+SPKLR  RRLPSLKKLL+WLRDSY+ AMLAFA+SRV+  G GGG GDG+WAGA GR+TLKEYDE+MITEIYK
Subjt:  SVGRGRRKTVQLGALGG-KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVV--GCGGGSGDGVWAGAGGRATLKEYDEEMITEIYK

Query:  SLVVAQARLPPPESVRPSWVGGRLPAVAE
        SLVVAQ RLPPPESVRPSW GGRLP VAE
Subjt:  SLVVAQARLPPPESVRPSWVGGRLPAVAE

XP_038897065.1 uncharacterized protein LOC120085238 isoform X2 [Benincasa hispida]9.0e-4476.74Show/hide
Query:  SVGRGRRKTVQLGALGG-KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVV--GCGGGSGDGVWAGAGGRATLKEYDEEMITEIYK
        SVGR + +TVQLGA GG +RR +W+ K+SPKLR  RRLPSLKKLL+WLRDSY+ AMLAFA+SRV+  G GGG GDG+WAGA GR+TLKEYDE+MITEIYK
Subjt:  SVGRGRRKTVQLGALGG-KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVV--GCGGGSGDGVWAGAGGRATLKEYDEEMITEIYK

Query:  SLVVAQARLPPPESVRPSWVGGRLPAVAE
        SLVVAQ RLPPPESVRPSW GGRLP VAE
Subjt:  SLVVAQARLPPPESVRPSWVGGRLPAVAE

TrEMBL top hitse value%identityAlignment
A0A0A0K7Z4 Uncharacterized protein2.4e-4273.85Show/hide
Query:  SVGRGRRKTVQLGALGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGS--GDGVWAGAGGRATLKEYDEEMITEIY
        SVGR R  T QLGA GG  +RR +W+ K+SPKLR  RR+PSLKKLL+WLRDSY+ AMLAFA+SRV+G G GS  GDG+W GA GR+TLKEYDE+MITEIY
Subjt:  SVGRGRRKTVQLGALGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGS--GDGVWAGAGGRATLKEYDEEMITEIY

Query:  KSLVVAQARLPPPESVRPSWVGGRLPAVAE
        KSLVVAQ RLPPPE+VRPSW GGRLP VAE
Subjt:  KSLVVAQARLPPPESVRPSWVGGRLPAVAE

A0A1S4DZ96 uncharacterized protein LOC1034927791.6e-4173.08Show/hide
Query:  SVGRGRRKTVQLGALGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGS--GDGVWAGAGGRATLKEYDEEMITEIY
        SVG  R +T QLGA GG  +RR +W+ K+SPKLR  RR+PSLKKLL+WLRDSY+ AMLAFA+SRV+G G GS  GDG+W GA GR+TLKEYDE+MITEIY
Subjt:  SVGRGRRKTVQLGALGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGS--GDGVWAGAGGRATLKEYDEEMITEIY

Query:  KSLVVAQARLPPPESVRPSWVGGRLPAVAE
        KSLVVAQ RLPPPE VRPSW GGRLP VAE
Subjt:  KSLVVAQARLPPPESVRPSWVGGRLPAVAE

A0A5A7TZB4 Uncharacterized protein4.1e-4273.85Show/hide
Query:  SVGRGRRKTVQLGALGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGS--GDGVWAGAGGRATLKEYDEEMITEIY
        SVGR R +T QLGA GG  +RR +W+ K+SPKLR  RR+PSLKKLL+WLRDSY+ AMLAFA+SRV+G G GS  GDG+W GA GR+TLKEYDE+MITEIY
Subjt:  SVGRGRRKTVQLGALGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGS--GDGVWAGAGGRATLKEYDEEMITEIY

Query:  KSLVVAQARLPPPESVRPSWVGGRLPAVAE
        KSLVVAQ RLPPPE VRPSW GGRLP VAE
Subjt:  KSLVVAQARLPPPESVRPSWVGGRLPAVAE

A0A6J1JLB7 uncharacterized protein LOC1114879681.0e-4072.66Show/hide
Query:  SVGRGRRKTVQLGALGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIYKS
        SVGRGR +T+QLGA GG  +RR +W+ K+SPKLR  RRLPSLKKLL+WLRDSY+ AMLAFA+SRV+G G   GDG+W G  GR+TLKEYDE+MITEIY S
Subjt:  SVGRGRRKTVQLGALGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIYKS

Query:  LVVAQARLPPPESVRPSWVGGRLPAVAE
        LVVAQ RLPPPESVR   VGGRLP VAE
Subjt:  LVVAQARLPPPESVRPSWVGGRLPAVAE

A0A6J1KRL9 uncharacterized protein LOC1114980564.8e-5993.08Show/hide
Query:  MEGVSVGRGRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIY
        MEGVSVGRGRRKTVQLGA GGKRR+VWQFKV  KLRRLRRLPSLKKLLIWLRDSYMNAMLA ASSRVVG GGG+GDGVW GAGGRATLKEYDEEMITEIY
Subjt:  MEGVSVGRGRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIY

Query:  KSLVVAQARLPPPESVRPSWVGGRLPAVAE
        KSLVVAQ RLPPPESVRPSWVGGRLPAVAE
Subjt:  KSLVVAQARLPPPESVRPSWVGGRLPAVAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47485.1 unknown protein1.4e-1546.08Show/hide
Query:  GRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIYKSLVVAQA
        GRR   ++     ++R  W+ K+ PKLR L++  S KKLL WLRD+Y+N ML  A+SRVVG   G G+    G G     KEYDE+ + EIYKS+++AQ 
Subjt:  GRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIYKSLVVAQA

Query:  RL
         L
Subjt:  RL

AT3G62650.1 unknown protein6.5e-1644.55Show/hide
Query:  GRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIYKSLVVAQA
        GRRK  ++     +++  W+ K+ PKLR L +  S KK L+WLRDSY+  M+  A+SRVVG  G  G G      G   +KEYDE+M+ EIYKS+++ QA
Subjt:  GRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIYKSLVVAQA

Query:  R
        +
Subjt:  R

AT3G62650.2 unknown protein6.5e-1644.55Show/hide
Query:  GRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIYKSLVVAQA
        GRRK  ++     +++  W+ K+ PKLR L +  S KK L+WLRDSY+  M+  A+SRVVG  G  G G      G   +KEYDE+M+ EIYKS+++ QA
Subjt:  GRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIYKSLVVAQA

Query:  R
        +
Subjt:  R


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGCGTTTCGGTGGGCCGTGGGCGGCGGAAGACGGTGCAGCTTGGGGCACTCGGGGGGAAGCGGCGGAATGTGTGGCAGTTCAAGGTCTCGCCGAAGCTCAGGCG
ACTCCGGCGGCTGCCGTCGCTGAAGAAGCTGCTTATATGGTTGAGGGATTCTTATATGAATGCGATGCTGGCGTTTGCGAGCTCTAGGGTCGTTGGTTGCGGCGGTGGTA
GTGGCGATGGGGTCTGGGCCGGCGCTGGCGGAAGGGCCACGTTGAAGGAGTATGATGAGGAAATGATCACGGAGATCTACAAGTCGTTGGTGGTGGCTCAGGCGCGGTTG
CCTCCGCCGGAATCTGTCCGGCCGAGTTGGGTCGGCGGCCGGTTGCCGGCTGTGGCGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGCGTTTCGGTGGGCCGTGGGCGGCGGAAGACGGTGCAGCTTGGGGCACTCGGGGGGAAGCGGCGGAATGTGTGGCAGTTCAAGGTCTCGCCGAAGCTCAGGCG
ACTCCGGCGGCTGCCGTCGCTGAAGAAGCTGCTTATATGGTTGAGGGATTCTTATATGAATGCGATGCTGGCGTTTGCGAGCTCTAGGGTCGTTGGTTGCGGCGGTGGTA
GTGGCGATGGGGTCTGGGCCGGCGCTGGCGGAAGGGCCACGTTGAAGGAGTATGATGAGGAAATGATCACGGAGATCTACAAGTCGTTGGTGGTGGCTCAGGCGCGGTTG
CCTCCGCCGGAATCTGTCCGGCCGAGTTGGGTCGGCGGCCGGTTGCCGGCTGTGGCGGAATAA
Protein sequenceShow/hide protein sequence
MEGVSVGRGRRKTVQLGALGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGSGDGVWAGAGGRATLKEYDEEMITEIYKSLVVAQARL
PPPESVRPSWVGGRLPAVAE