CuGenDBv2

Gene ID	Carg12126
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Epidermal patterning factor-like protein
Genome location	Carg_Chr11:2360967..2361375
RNA-Seq Expression	Carg12126
Synteny	Carg12126
Gene Ontology terms	GO:0010052 - guard cell differentiation (biological process) GO:0005576 - extracellular region (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039455 - EPIDERMAL PATTERNING FACTOR-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022933440.1 EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X1 [Cucurbita moschata]

4.2e-52

95.41

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Query:  MALNNSLFLILPLIFSLSVFHPT-----SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKC
        MALNNSLFLILPLIFSLSVFHPT     SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKC
Subjt:  MALNNSLFLILPLIFSLSVFHPT-----SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKC

Query:  KCKDKYFQP
        KCKDKYFQP
Subjt:  KCKDKYFQP

XP_022933441.1 EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X2 [Cucurbita moschata]

5.9e-54

100

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Query:  MALNNSLFLILPLIFSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDK
        MALNNSLFLILPLIFSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDK
Subjt:  MALNNSLFLILPLIFSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDK

Query:  YFQP
        YFQP
Subjt:  YFQP

XP_022971966.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X2 [Cucurbita maxima]

8.8e-50

95.19

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Query:  MALNNSLFLILPLIFSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDK
        MALNNSLFLILPLIFSLSVF PTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQR KG D+NNGGVVSN+EAAQVPKDDAYYLLSWKCKCKDK
Subjt:  MALNNSLFLILPLIFSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDK

Query:  YFQP
        YFQP
Subjt:  YFQP

XP_023531006.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X1 [Cucurbita pepo subsp. pepo]

4.2e-52

95.41

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Query:  MALNNSLFLILPLIFSLSVFHPT-----SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKC
        MALNNSLFLILPLIFSLSVFHPT     SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKC
Subjt:  MALNNSLFLILPLIFSLSVFHPT-----SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKC

Query:  KCKDKYFQP
        KCKDKYFQP
Subjt:  KCKDKYFQP

XP_023531007.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X2 [Cucurbita pepo subsp. pepo]

5.9e-54

100

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Query:  MALNNSLFLILPLIFSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDK
        MALNNSLFLILPLIFSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDK
Subjt:  MALNNSLFLILPLIFSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDK

Query:  YFQP
        YFQP
Subjt:  YFQP

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EZ19 Epidermal patterning factor-like protein

2.8e-54

100

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Query:  MALNNSLFLILPLIFSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDK
        MALNNSLFLILPLIFSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDK
Subjt:  MALNNSLFLILPLIFSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDK

Query:  YFQP
        YFQP
Subjt:  YFQP

A0A6J1F4W6 Epidermal patterning factor-like protein

2.0e-52

95.41

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Query:  MALNNSLFLILPLIFSLSVFHPT-----SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKC
        MALNNSLFLILPLIFSLSVFHPT     SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKC
Subjt:  MALNNSLFLILPLIFSLSVFHPT-----SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKC

Query:  KCKDKYFQP
        KCKDKYFQP
Subjt:  KCKDKYFQP

A0A6J1I4N2 Epidermal patterning factor-like protein

4.3e-50

95.19

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Query:  MALNNSLFLILPLIFSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDK
        MALNNSLFLILPLIFSLSVF PTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQR KG D+NNGGVVSN+EAAQVPKDDAYYLLSWKCKCKDK
Subjt:  MALNNSLFLILPLIFSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDK

Query:  YFQP
        YFQP
Subjt:  YFQP

A0A6J1I8G8 Epidermal patterning factor-like protein

3.1e-48

90.83

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Query:  MALNNSLFLILPLIFSLSVFHPTS-----GNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKC
        MALNNSLFLILPLIFSLSVF PTS     GNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQR KG D+NNGGVVSN+EAAQVPKDDAYYLLSWKC
Subjt:  MALNNSLFLILPLIFSLSVFHPTS-----GNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKC

Query:  KCKDKYFQP
        KCKDKYFQP
Subjt:  KCKDKYFQP

A0A6J1JFP8 Epidermal patterning factor-like protein

2.9e-38

79.25

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Query:  MALNNSLFLILPLIFSLSVFHPTSGNED-SKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAA-QVPKDDAYYLLSWKCKCK
        MAL +SL LILPLIFSLS+ HPTSGNED S+QKEL IGSRPP+CFNKCLNC+PCVAALVISQRHKG  +N     SNLEAA   P+DDAYYLLSWKCKCK
Subjt:  MALNNSLFLILPLIFSLSVFHPTSGNED-SKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAA-QVPKDDAYYLLSWKCKCK

Query:  DKYFQP
        DKYFQP
Subjt:  DKYFQP

SwissProt top hits

e value

%identity

Alignment

P43212 Polygalacturonase

9.9e-04

30.77

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Query:  EDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP
        +   +  + +GSRPP C NKC  C PC A LVI  R                   +P++  YY   W C    K + P
Subjt:  EDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP

Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 8

4.6e-09

34.74

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Query:  LIFSLSVFHPTSG--NEDSKQKELAIGSRPPKCFNKCLNCKPCVAALV-ISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP
        + FSL   H  SG      + KE  +GS PP C  KC NCKPC+  L  I   H  DD +                + YY + W C+C+D+ F+P
Subjt:  LIFSLSVFHPTSG--NEDSKQKELAIGSRPPKCFNKCLNCKPCVAALV-ISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 1

4.0e-05

28.33

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Query:  ALNNSLFLILPLI-----------FSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA----ALVISQRHKGDDSNNGGVVSNLEAAQVPKD-
        A+  S  L+LPLI           F   +  P S      + +  +GS PP C N+C NC PC+A     L    R    +  +GG V    +     D 
Subjt:  ALNNSLFLILPLI-----------FSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA----ALVISQRHKGDDSNNGGVVSNLEAAQVPKD-

Query:  -DAYYLLSWKCKCKDKYFQP
           Y  + WKC C   ++ P
Subjt:  -DAYYLLSWKCKCKDKYFQP

Arabidopsis top hits

e value

%identity

Alignment

AT1G80133.1 unknown protein

3.3e-10

34.74

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Query:  LIFSLSVFHPTSG--NEDSKQKELAIGSRPPKCFNKCLNCKPCVAALV-ISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP
        + FSL   H  SG      + KE  +GS PP C  KC NCKPC+  L  I   H  DD +                + YY + W C+C+D+ F+P
Subjt:  LIFSLSVFHPTSG--NEDSKQKELAIGSRPPKCFNKCLNCKPCVAALV-ISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP

AT5G10310.1 unknown protein

2.9e-06

28.33

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Query:  ALNNSLFLILPLI-----------FSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA----ALVISQRHKGDDSNNGGVVSNLEAAQVPKD-
        A+  S  L+LPLI           F   +  P S      + +  +GS PP C N+C NC PC+A     L    R    +  +GG V    +     D 
Subjt:  ALNNSLFLILPLI-----------FSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA----ALVISQRHKGDDSNNGGVVSNLEAAQVPKD-

Query:  -DAYYLLSWKCKCKDKYFQP
           Y  + WKC C   ++ P
Subjt:  -DAYYLLSWKCKCKDKYFQP

Sequences

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CDS sequence

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ATGGCTTTAAACAATTCCCTCTTTCTCATTCTCCCTCTCATATTCTCCCTCTCTGTCTTTCACCCCACATCAGGGAATGAAGATTCAAAGCAGAAGGAATTGGCTATTGG
GTCAAGGCCACCGAAGTGCTTCAACAAGTGCTTGAATTGCAAGCCATGTGTTGCTGCTTTGGTCATTTCTCAGCGCCACAAAGGTGATGATAGTAACAACGGTGGTGTTG
TTTCTAATTTGGAGGCGGCTCAAGTTCCCAAAGATGATGCCTATTATCTTCTCTCATGGAAATGCAAGTGTAAAGATAAGTACTTTCAACCTTGA

mRNA sequence

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Protein sequence

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MALNNSLFLILPLIFSLSVFHPTSGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP

Carg12126 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome