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Carg12127 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12127
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF4050 family protein
Genome locationCarg_Chr11:2364155..2366384
RNA-Seq ExpressionCarg12127
SyntenyCarg12127
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587898.1 hypothetical protein SDJN03_16463, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4999.03Show/hide
Query:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP
        MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNP 
Subjt:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP

Query:  EFV
        EFV
Subjt:  EFV

KAG7021782.1 hypothetical protein SDJN02_15509 [Cucurbita argyrosperma subsp. argyrosperma]7.7e-79100Show/hide
Query:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP
        MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP
Subjt:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP

Query:  EFVFFSGIRTGCNGLVVVVAATQRIKLNKNGRRKSGNGEVSCGSMGTGGPI
        EFVFFSGIRTGCNGLVVVVAATQRIKLNKNGRRKSGNGEVSCGSMGTGGPI
Subjt:  EFVFFSGIRTGCNGLVVVVAATQRIKLNKNGRRKSGNGEVSCGSMGTGGPI

XP_022933439.1 uncharacterized protein LOC111440853 [Cucurbita moschata]8.3e-4998.06Show/hide
Query:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP
        MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVG SVSNP 
Subjt:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP

Query:  EFV
        EFV
Subjt:  EFV

XP_022971935.1 uncharacterized protein LOC111470604 [Cucurbita maxima]8.3e-4998.06Show/hide
Query:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP
        MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVG SVSNP 
Subjt:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP

Query:  EFV
        EFV
Subjt:  EFV

XP_023531005.1 uncharacterized protein LOC111793390 [Cucurbita pepo subsp. pepo]8.3e-4998.06Show/hide
Query:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP
        MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTS LTLTHSNVGGSVSNP 
Subjt:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP

Query:  EFV
        EFV
Subjt:  EFV

TrEMBL top hitse value%identityAlignment
A0A5A7U2N6 DUF4050 family protein1.7e-4492.23Show/hide
Query:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP
        MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKK SISDGFWSTSTCDLDNSTIQSQ SISSISTSNLTL++SNV GSVS+  
Subjt:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP

Query:  EFV
        EFV
Subjt:  EFV

A0A6J1CTQ5 uncharacterized protein LOC1110144861.2e-4593.2Show/hide
Query:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP
        MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGR+VKK SISDGFWSTSTCDLDNSTIQSQ SISSISTSNLTL  SNVGGS SNP 
Subjt:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP

Query:  EFV
        EFV
Subjt:  EFV

A0A6J1EZS6 uncharacterized protein LOC1114408534.0e-4998.06Show/hide
Query:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP
        MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVG SVSNP 
Subjt:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP

Query:  EFV
        EFV
Subjt:  EFV

A0A6J1H9M2 uncharacterized protein LOC1114618002.1e-4593.2Show/hide
Query:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP
        MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKK SISDGFWSTSTCDLDNSTIQSQ SISSISTSNLT + SNVGGSVSNP 
Subjt:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP

Query:  EFV
        E+V
Subjt:  EFV

A0A6J1I744 uncharacterized protein LOC1114706044.0e-4998.06Show/hide
Query:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP
        MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVG SVSNP 
Subjt:  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPP

Query:  EFV
        EFV
Subjt:  EFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15350.1 unknown protein5.2e-0942.53Show/hide
Query:  MGGCFGCCT--KPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPPEFV
        MGGC GC    + T     D PS  +    R  KK S+S+ FWSTST D+DN T  SQ S+SS   SN T    +   + + PPE+V
Subjt:  MGGCFGCCT--KPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPPEFV

AT1G15350.2 unknown protein5.2e-0942.53Show/hide
Query:  MGGCFGCCT--KPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPPEFV
        MGGC GC    + T     D PS  +    R  KK S+S+ FWSTST D+DN T  SQ S+SS   SN T    +   + + PPE+V
Subjt:  MGGCFGCCT--KPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPPEFV

AT4G32342.1 unknown protein1.6e-1359.72Show/hide
Query:  CFGCCTKPTP-IIAVDEPSKGLRIQGRVVKKRSI-SDGFWSTSTCDLD-NSTIQSQ----PSISSISTSNLT
        CFGCC +    ++ VDEPSKGL+IQG++VKK S  SD FWSTSTCD+D N TIQSQ    P     STSN T
Subjt:  CFGCCTKPTP-IIAVDEPSKGLRIQGRVVKKRSI-SDGFWSTSTCDLD-NSTIQSQ----PSISSISTSNLT

AT5G25360.1 unknown protein8.3e-3165Show/hide
Query:  LNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPPEFV
        L     +WI +LF CMGGCFGCC KP  I+AVDEPSKGLRIQGR+VKK S+S+ FWSTSTC++DNST+QSQ S+SSIS +N T T      S SNP EFV
Subjt:  LNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPPEFV

AT5G25360.2 unknown protein8.3e-3165Show/hide
Query:  LNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPPEFV
        L     +WI +LF CMGGCFGCC KP  I+AVDEPSKGLRIQGR+VKK S+S+ FWSTSTC++DNST+QSQ S+SSIS +N T T      S SNP EFV
Subjt:  LNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPPEFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATGCTTAATAGTTCCTTCGCCGCCTGGATCAGCCGCTTGTTCGCTTGCATGGGGGGTTGTTTTGGATGCTGCACTAAACCAACACCTATTATTGCTGTGGATGA
GCCATCTAAGGGATTAAGAATTCAAGGACGAGTCGTTAAGAAACGTAGCATATCTGATGGTTTTTGGAGCACAAGCACATGTGATTTGGATAATAGCACCATTCAATCTC
AACCAAGCATCTCCTCTATCAGTACATCAAACCTCACACTCACTCATAGCAATGTTGGTGGCAGTGTGAGCAACCCTCCTGAATTTGTCTTCTTCTCTGGAATCAGAACA
GGCTGCAATGGATTGGTGGTAGTAGTAGCAGCAACACAACGGATCAAACTCAACAAAAACGGAAGGCGAAAATCAGGAAATGGTGAAGTTTCTTGTGGAAGTATGGGAAC
AGGAGGGCCTATATGA
mRNA sequenceShow/hide mRNA sequence
CATCCAACTTCCTGCTTTCTTGCCCCAACTCTACTCCATCTCTCGCCTGTTACAGGTTCTTAGCTTCACTCTCGTTTTCCCTGAATCGATGCCCTTCTCTGCGCTTTTGG
CTTAATATCAACATGGTTATGCTTAATAGTTCCTTCGCCGCCTGGATCAGCCGCTTGTTCGCTTGCATGGGGGGTTGTTTTGGATGCTGCACTAAACCAACACCTATTAT
TGCTGTGGATGAGCCATCTAAGGGATTAAGAATTCAAGGACGAGTCGTTAAGAAACGTAGCATATCTGATGGTTTTTGGAGCACAAGCACATGTGATTTGGATAATAGCA
CCATTCAATCTCAACCAAGCATCTCCTCTATCAGTACATCAAACCTCACACTCACTCATAGCAATGTTGGTGGCAGTGTGAGCAACCCTCCTGAATTTGTCTTCTTCTCT
GGAATCAGAACAGGCTGCAATGGATTGGTGGTAGTAGTAGCAGCAACACAACGGATCAAACTCAACAAAAACGGAAGGCGAAAATCAGGAAATGGTGAAGTTTCTTGTGG
AAGTATGGGAACAGGAGGGCCTATATGA
Protein sequenceShow/hide protein sequence
MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGGSVSNPPEFVFFSGIRT
GCNGLVVVVAATQRIKLNKNGRRKSGNGEVSCGSMGTGGPI