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Carg12143 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12143
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr11:2447472..2450063
RNA-Seq ExpressionCarg12143
SyntenyCarg12143
Gene Ontology termsGO:0032259 - methylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046741.1 hypothetical protein E6C27_scaffold216G00220 [Cucumis melo var. makuwa]6.1e-1968.29Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR
        M+RSSSTSR+FDE+SVD+ P   SSPPLKNEA   +LPLFK ++  KKEMG  FK PG NAVHLIPL L L ALILW+CS+R
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR

KAE8653076.1 hypothetical protein Csa_019861 [Cucumis sativus]3.0e-1866.67Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSS
        M+RSSSTSR+F+E+SVD+ P   SSPPLKNEA   +LPLFK ++  KKEMG  FK PG+NAVHLIPL L L ALILW+CS+
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSS

KAG6587911.1 hypothetical protein SDJN03_16476, partial [Cucurbita argyrosperma subsp. sororia]2.0e-38100Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR
        MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR

KAG7021797.1 hypothetical protein SDJN02_15525, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-52100Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRSGREINVFLKHDFMNSIDD
        MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRSGREINVFLKHDFMNSIDD
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRSGREINVFLKHDFMNSIDD

Query:  GAA
        GAA
Subjt:  GAA

XP_030474027.1 uncharacterized protein LOC115691521 [Syzygium oleosum]1.6e-1153.66Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFK---IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICS
        M R SS SR+FDE+ V++ P  T+   L+N + +D LPLF+    D+ KKE G H K PG+ AVHLIPL+LLL AL LW+CS
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFK---IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICS

TrEMBL top hitse value%identityAlignment
A0A059CNE3 Uncharacterized protein4.3e-1047.56Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFK---IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICS
        MHR SS SR+ DE+ V++ P   +   L+N + +D LPLF+    D  KKE G H + PG+ A+HLIP++L L AL LW+CS
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFK---IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICS

A0A067KJC2 Uncharacterized protein1.2e-0955.56Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFK--IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICS
        MHRSSSTSR  DE SV+         P+K  +  D LP++K   D  KKE+G H K  G+NAVHLIPLILLL ALILW+ S
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFK--IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICS

A0A0A0LTP3 Uncharacterized protein2.9e-1967.07Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR
        M+RSSSTSR+F+E+SVD+ P   SSPPLKNEA   +LPLFK ++  KKEMG  FK PG+NAVHLIPL L L ALILW+CS+R
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR

A0A438EIF2 Uncharacterized protein8.6e-1151.85Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFK--IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICS
        M+RS+STSR  DE+ V++ P    S PLK  A +D LP++    D  KKEM  H K  G+NA+HLIPL+L+L ALILW+ S
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFK--IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICS

A0A5A7TZH0 Uncharacterized protein2.9e-1968.29Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR
        M+RSSSTSR+FDE+SVD+ P   SSPPLKNEA   +LPLFK ++  KKEMG  FK PG NAVHLIPL L L ALILW+CS+R
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35658.1 unknown protein1.1e-0536.47Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDD----LLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSS
        M RS+S S   D+ S + P    S P +K  A  D    LLP +  ++ P K+    F+   +NA+H IP++L+L A+ILW+ S+
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDD----LLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSS

AT2G35658.2 unknown protein1.1e-0536.47Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDD----LLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSS
        M RS+S S   D+ S + P    S P +K  A  D    LLP +  ++ P K+    F+   +NA+H IP++L+L A+ILW+ S+
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDD----LLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSS

AT2G35658.3 unknown protein1.1e-0536.47Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDD----LLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSS
        M RS+S S   D+ S + P    S P +K  A  D    LLP +  ++ P K+    F+   +NA+H IP++L+L A+ILW+ S+
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDD----LLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSS

AT4G16840.1 unknown protein7.7e-0436.47Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEA---PDDLLPLFKIDTPKKEMGPHFKPP---GQNAVHLIPLILLLSALILWICS
        M RS+S SR  D +     P  + SPP         DD+  L     P  + G   K      +N +HLIPLILLL   ILW+ S
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEA---PDDLLPLFKIDTPKKEMGPHFKPP---GQNAVHLIPLILLLSALILWICS

AT5G07490.1 unknown protein7.7e-0434.74Show/hide
Query:  MHRSSSTSRNFDEYSV--DMPPGFTSSPPLKNEAPDDLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRSGREINVFLKHD
        M+RS+S +R  ++YSV    P G          AP D  P  +  T K++    F    +NAVH+IP +LL  AL+LW  S+    +++V +K D
Subjt:  MHRSSSTSRNFDEYSV--DMPPGFTSSPPLKNEAPDDLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRSGREINVFLKHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAGGTCTTCAAGCACGTCTCGAAACTTCGACGAGTACTCGGTCGACATGCCACCGGGTTTCACCAGCTCCCCACCATTGAAGAATGAAGCTCCTGATGATCTGTT
GCCACTGTTCAAGATTGATACCCCCAAGAAAGAAATGGGGCCACATTTTAAACCTCCTGGACAAAATGCAGTTCATCTTATTCCTCTCATTCTGCTTCTCTCTGCTTTAA
TCCTCTGGATTTGTTCGTCCAGATCAGGGAGAGAGATTAACGTGTTTCTCAAGCATGATTTTATGAACAGTATCGATGATGGTGCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATAGGTCTTCAAGCACGTCTCGAAACTTCGACGAGTACTCGGTCGACATGCCACCGGGTTTCACCAGCTCCCCACCATTGAAGAATGAAGCTCCTGATGATCTGTT
GCCACTGTTCAAGATTGATACCCCCAAGAAAGAAATGGGGCCACATTTTAAACCTCCTGGACAAAATGCAGTTCATCTTATTCCTCTCATTCTGCTTCTCTCTGCTTTAA
TCCTCTGGATTTGTTCGTCCAGATCAGGGAGAGAGATTAACGTGTTTCTCAAGCATGATTTTATGAACAGTATCGATGATGGTGCTGCTTGATGTCTGATATTTTAGCGA
TTACAAAAGCCATTAGTATGAGCAAACACACAAAGAAAACGAAAAAAAAACAAGAAGAAATCGAATCGGAGGCTGTTTCGTGTTGCTTTCGATTTGATCAAGACCTGAAA
AGACTAAGCTGTTTATAATTTTGACATTCCAATGGTAGAATT
Protein sequenceShow/hide protein sequence
MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRSGREINVFLKHDFMNSIDDGAA