| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6587914.1 hypothetical protein SDJN03_16479, partial [Cucurbita argyrosperma subsp. sororia] | 4.2e-43 | 86.79 | Show/hide |
Query: WTVMIRVYTHMSSYTLEFEPVADEQTTSLCRGKLREGKADLNPVEGAAVGLMCLELERNQVIGGESYDWEIGSSSRDEDNDSSDDGSGSSRHQDRTQRQT
WT ++ +Y +EFEPVADEQTTSLCRGKLREGKADLNPVEGAAVGLMCLELERNQVIGG+SYDWEIGSSSRDEDNDSSDDGSGSSRHQDRTQRQT
Subjt: WTVMIRVYTHMSSYTLEFEPVADEQTTSLCRGKLREGKADLNPVEGAAVGLMCLELERNQVIGGESYDWEIGSSSRDEDNDSSDDGSGSSRHQDRTQRQT
Query: TPDNPP
TPDNPP
Subjt: TPDNPP
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| KAG6587915.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | 1.7e-39 | 80 | Show/hide |
Query: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRADAISFTAPIAGYAMWGNTDRARKVFGEMPVRDVTARELFDDMPERD
MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKS AKLASAHGGKQIRADAISFTAPIAGYAMWGNTDRARKVFGEMPV RD
Subjt: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRADAISFTAPIAGYAMWGNTDRARKVFGEMPVRDVTARELFDDMPERD
Query: VVSWTVMIRVYTHMS
VVSW M+ Y S
Subjt: VVSWTVMIRVYTHMS
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| KAG6589865.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | 3.6e-26 | 36.33 | Show/hide |
Query: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
MIR LS+SLS V+ LVFFVRMIH+GV+P+SYTFPFL KSCAKLASA GKQI A DAISFT
Subjt: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
Query: APIAGYAMWGNTDRARKVFGEMPVRDV-------------------------------------------------------------------------
A IAGY +WG DRARK+F EMPVRDV
Subjt: APIAGYAMWGNTDRARKVFGEMPVRDV-------------------------------------------------------------------------
Query: --------------TARELFDDMPERDVVSWTVMIRVYTHMSSYTLEFEPVADEQTTSLCRGKLREG
TARELFD+MPERDV+SW VMI YTHM SY ++ +L RG L G
Subjt: --------------TARELFDDMPERDVVSWTVMIRVYTHMSSYTLEFEPVADEQTTSLCRGKLREG
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| KAG7021800.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma] | 4.3e-112 | 100 | Show/hide |
Query: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRADAISFTAPIAGYAMWGNTDRARKVFGEMPVRDVTARELFDDMPERD
MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRADAISFTAPIAGYAMWGNTDRARKVFGEMPVRDVTARELFDDMPERD
Subjt: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRADAISFTAPIAGYAMWGNTDRARKVFGEMPVRDVTARELFDDMPERD
Query: VVSWTVMIRVYTHMSSYTLEFEPVADEQTTSLCRGKLREGKADLNPVEGAAVGLMCLELERNQVIGGESYDWEIGSSSRDEDNDSSDDGSGSSRHQDRTQ
VVSWTVMIRVYTHMSSYTLEFEPVADEQTTSLCRGKLREGKADLNPVEGAAVGLMCLELERNQVIGGESYDWEIGSSSRDEDNDSSDDGSGSSRHQDRTQ
Subjt: VVSWTVMIRVYTHMSSYTLEFEPVADEQTTSLCRGKLREGKADLNPVEGAAVGLMCLELERNQVIGGESYDWEIGSSSRDEDNDSSDDGSGSSRHQDRTQ
Query: RQTTPDNPP
RQTTPDNPP
Subjt: RQTTPDNPP
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| XP_038878535.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Benincasa hispida] | 5.5e-27 | 38.93 | Show/hide |
Query: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
MIR LSMSLS V+ LVFFVRMI+SGV+P+SYTFPFL KSCAKLASAH GKQI A DAISFT
Subjt: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
Query: APIAGYAMWGNTDRARKVFGEMPVRDV-------------------------------------------------------------------------
A IAGYA+WG D ARK+F EMPVRDV
Subjt: APIAGYAMWGNTDRARKVFGEMPVRDV-------------------------------------------------------------------------
Query: --------------TARELFDDMPERDVVSWTVMIRVYTHMSSY
TARELFDDMPERDV+SW VMI YTHM SY
Subjt: --------------TARELFDDMPERDVVSWTVMIRVYTHMSSY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LU28 DYW_deaminase domain-containing protein | 1.9e-25 | 37.7 | Show/hide |
Query: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
MIR LSMSLS + LVFFVRMI+SGV+P+SYTFPFL KSCAKLASAH GKQI A DAISFT
Subjt: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
Query: APIAGYAMWGNTDRARKVFGEMPVRDV-------------------------------------------------------------------------
A IAGYA+WG DRAR++F EMPV+DV
Subjt: APIAGYAMWGNTDRARKVFGEMPVRDV-------------------------------------------------------------------------
Query: --------------TARELFDDMPERDVVSWTVMIRVYTHMSSY
TARELFDDM ERDV+SW VMI YTHM SY
Subjt: --------------TARELFDDMPERDVVSWTVMIRVYTHMSSY
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| A0A1S3CMX0 pentatricopeptide repeat-containing protein At1g08070, chloroplastic | 3.9e-26 | 38.11 | Show/hide |
Query: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
MIR LSMSLS V+ LVFFVRMI+SGV+P+SYTFPFL KSCAKLASA GKQI A DAISFT
Subjt: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
Query: APIAGYAMWGNTDRARKVFGEMPVRDV-------------------------------------------------------------------------
A IAGYA+WG DRAR++F EMPV+DV
Subjt: APIAGYAMWGNTDRARKVFGEMPVRDV-------------------------------------------------------------------------
Query: --------------TARELFDDMPERDVVSWTVMIRVYTHMSSY
TARELFDDMPERDV+SW VMI YTHM SY
Subjt: --------------TARELFDDMPERDVVSWTVMIRVYTHMSSY
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| A0A5A7TTJ1 Pentatricopeptide repeat-containing protein | 3.9e-26 | 38.11 | Show/hide |
Query: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
MIR LSMSLS V+ LVFFVRMI+SGV+P+SYTFPFL KSCAKLASA GKQI A DAISFT
Subjt: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
Query: APIAGYAMWGNTDRARKVFGEMPVRDV-------------------------------------------------------------------------
A IAGYA+WG DRAR++F EMPV+DV
Subjt: APIAGYAMWGNTDRARKVFGEMPVRDV-------------------------------------------------------------------------
Query: --------------TARELFDDMPERDVVSWTVMIRVYTHMSSY
TARELFDDMPERDV+SW VMI YTHM SY
Subjt: --------------TARELFDDMPERDVVSWTVMIRVYTHMSSY
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| A0A6J1HAU9 pentatricopeptide repeat-containing protein At1g08070, chloroplastic | 6.6e-26 | 37.7 | Show/hide |
Query: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
MIR LS+SLS V+ LVFFVRMIH+GV+P+SYTFPFL KSCAKLASA GKQI A DAISFT
Subjt: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
Query: APIAGYAMWGNTDRARKVFGEMPVRDV-------------------------------------------------------------------------
A IAGY +WG DRARK+F EMPVRDV
Subjt: APIAGYAMWGNTDRARKVFGEMPVRDV-------------------------------------------------------------------------
Query: --------------TARELFDDMPERDVVSWTVMIRVYTHMSSY
TARELFD+MPERDV+SW VMI YTHM SY
Subjt: --------------TARELFDDMPERDVVSWTVMIRVYTHMSSY
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| A0A6J1JHE6 pentatricopeptide repeat-containing protein At1g08070, chloroplastic | 4.3e-25 | 36.89 | Show/hide |
Query: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
MIR LS+SLS V+ LVFF RMIH+GV+P+SYTFPFL KSCA+LASA GKQI A DAISFT
Subjt: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
Query: APIAGYAMWGNTDRARKVFGEMPVRDV-------------------------------------------------------------------------
A IAGY +WG DRARK+F EMPVRDV
Subjt: APIAGYAMWGNTDRARKVFGEMPVRDV-------------------------------------------------------------------------
Query: --------------TARELFDDMPERDVVSWTVMIRVYTHMSSY
TARELFD+MPERDV+SW VMI YTHM SY
Subjt: --------------TARELFDDMPERDVVSWTVMIRVYTHMSSY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O49399 Pentatricopeptide repeat-containing protein At4g18840 | 1.1e-09 | 27.51 | Show/hide |
Query: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
+IR + S + + L F M+ V PD Y+F F+ K+CA G+QI DA+S+
Subjt: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
Query: APIAGYAMWGNTDRARKVFGEMPVRDV-----------------TARELFDDMPERDVVSWTVMIRVYTHMSSY--TLE-FEPVADEQT
+ ++ Y G D AR +F EM R+V A+E+FD MP RDVVSW M+ Y H+ Y LE F + D+ T
Subjt: APIAGYAMWGNTDRARKVFGEMPVRDV-----------------TARELFDDMPERDVVSWTVMIRVYTHMSSY--TLE-FEPVADEQT
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| Q9FLS9 Pentatricopeptide repeat-containing protein At5g61800 | 1.4e-09 | 35.66 | Show/hide |
Query: FFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGG----KQIRADAISF---------TAPIAGYAMWGNTDRARKVFGEMPVRDVT---------------
FFV M V PD +TFPF+FK+CA A +G K + A+ F I Y++ D A ++F E P RDV
Subjt: FFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGG----KQIRADAISF---------TAPIAGYAMWGNTDRARKVFGEMPVRDVT---------------
Query: --ARELFDDMPERDVVSWTVMIRVYTHMS
ARELFD MP RD+VSW +I Y M+
Subjt: --ARELFDDMPERDVVSWTVMIRVYTHMS
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| Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic | 5.6e-14 | 34.18 | Show/hide |
Query: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA---------DAISFTAPIAGYAMWGNTDRARKVFGEMPVRDV----
M R ++S V L +V MI G+ P+SYTFPF+ KSCAK + G+QI D T+ I+ Y G + A KVF + P RDV
Subjt: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA---------DAISFTAPIAGYAMWGNTDRARKVFGEMPVRDV----
Query: -------------TARELFDDMPERDVVSWTVMIRVYTHMSSYTLEFEPVADEQTTSL
A++LFD++P +DVVSW MI Y +Y E D T++
Subjt: -------------TARELFDDMPERDVVSWTVMIRVYTHMSSYTLEFEPVADEQTTSL
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| Q9LUJ2 Pentatricopeptide repeat-containing protein At3g22690 | 2.9e-10 | 35.66 | Show/hide |
Query: LVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA---------DAISFTAPIAGYAMWGNTDRARKVFGEMPVRDVTARELFDDMPERDVVSWT
++ F+RM++SG+ PD YTFPF +CAK + G QI D + + YA G D ARKV FD+M ER+VVSWT
Subjt: LVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA---------DAISFTAPIAGYAMWGNTDRARKVFGEMPVRDVTARELFDDMPERDVVSWT
Query: VMIRVYTH----MSSYTLEFEPVADEQTT
MI Y + L F V DE+ T
Subjt: VMIRVYTH----MSSYTLEFEPVADEQTT
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| Q9SIL5 Pentatricopeptide repeat-containing protein At2g20540 | 3.2e-09 | 36.21 | Show/hide |
Query: PDSYTFPFLFKSCAKLASAHGGKQI---------RADAISFTAPIAGYAMWGNTDRARKVFGEMPVRDV-----------------TARELFDDMPERDV
PD +TFPF+FKSCA L S + GKQ+ R ++ A I Y + + A KVF EM RDV A+ LF M ++ +
Subjt: PDSYTFPFLFKSCAKLASAHGGKQI---------RADAISFTAPIAGYAMWGNTDRARKVFGEMPVRDV-----------------TARELFDDMPERDV
Query: VSWTVMIRVYTHMSSY
VSWT MI YT + Y
Subjt: VSWTVMIRVYTHMSSY
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 4.0e-15 | 34.18 | Show/hide |
Query: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA---------DAISFTAPIAGYAMWGNTDRARKVFGEMPVRDV----
M R ++S V L +V MI G+ P+SYTFPF+ KSCAK + G+QI D T+ I+ Y G + A KVF + P RDV
Subjt: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA---------DAISFTAPIAGYAMWGNTDRARKVFGEMPVRDV----
Query: -------------TARELFDDMPERDVVSWTVMIRVYTHMSSYTLEFEPVADEQTTSL
A++LFD++P +DVVSW MI Y +Y E D T++
Subjt: -------------TARELFDDMPERDVVSWTVMIRVYTHMSSYTLEFEPVADEQTTSL
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| AT3G22690.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885) | 2.0e-11 | 35.66 | Show/hide |
Query: LVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA---------DAISFTAPIAGYAMWGNTDRARKVFGEMPVRDVTARELFDDMPERDVVSWT
++ F+RM++SG+ PD YTFPF +CAK + G QI D + + YA G D ARKV FD+M ER+VVSWT
Subjt: LVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA---------DAISFTAPIAGYAMWGNTDRARKVFGEMPVRDVTARELFDDMPERDVVSWT
Query: VMIRVYTH----MSSYTLEFEPVADEQTT
MI Y + L F V DE+ T
Subjt: VMIRVYTH----MSSYTLEFEPVADEQTT
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| AT3G22690.2 INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification | 2.0e-11 | 35.66 | Show/hide |
Query: LVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA---------DAISFTAPIAGYAMWGNTDRARKVFGEMPVRDVTARELFDDMPERDVVSWT
++ F+RM++SG+ PD YTFPF +CAK + G QI D + + YA G D ARKV FD+M ER+VVSWT
Subjt: LVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA---------DAISFTAPIAGYAMWGNTDRARKVFGEMPVRDVTARELFDDMPERDVVSWT
Query: VMIRVYTH----MSSYTLEFEPVADEQTT
MI Y + L F V DE+ T
Subjt: VMIRVYTH----MSSYTLEFEPVADEQTT
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| AT4G18840.1 Pentatricopeptide repeat (PPR-like) superfamily protein | 7.7e-11 | 27.51 | Show/hide |
Query: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
+IR + S + + L F M+ V PD Y+F F+ K+CA G+QI DA+S+
Subjt: MIRRLSMSLSAVMPLVFFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRA----------------------------------------DAISFT
Query: APIAGYAMWGNTDRARKVFGEMPVRDV-----------------TARELFDDMPERDVVSWTVMIRVYTHMSSY--TLE-FEPVADEQT
+ ++ Y G D AR +F EM R+V A+E+FD MP RDVVSW M+ Y H+ Y LE F + D+ T
Subjt: APIAGYAMWGNTDRARKVFGEMPVRDV-----------------TARELFDDMPERDVVSWTVMIRVYTHMSSY--TLE-FEPVADEQT
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| AT5G61800.1 Pentatricopeptide repeat (PPR) superfamily protein | 1.0e-10 | 35.66 | Show/hide |
Query: FFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGG----KQIRADAISF---------TAPIAGYAMWGNTDRARKVFGEMPVRDVT---------------
FFV M V PD +TFPF+FK+CA A +G K + A+ F I Y++ D A ++F E P RDV
Subjt: FFVRMIHSGVKPDSYTFPFLFKSCAKLASAHGG----KQIRADAISF---------TAPIAGYAMWGNTDRARKVFGEMPVRDVT---------------
Query: --ARELFDDMPERDVVSWTVMIRVYTHMS
ARELFD MP RD+VSW +I Y M+
Subjt: --ARELFDDMPERDVVSWTVMIRVYTHMS
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