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Carg12169 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12169
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr11:2546140..2547187
RNA-Seq ExpressionCarg12169
SyntenyCarg12169
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587934.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2391.8Show/hide
Query:  CFSLLTKQPRYYTLQDLVVWFLRIGDMQANFSSRIVTTPADYRNWHYEKISAQNISIVAVV
        C  L T+ PRYYTLQDLVVWFLRIGDMQANFSSRIVTTPADYRNWHYEKISAQNISIVAVV
Subjt:  CFSLLTKQPRYYTLQDLVVWFLRIGDMQANFSSRIVTTPADYRNWHYEKISAQNISIVAVV
KAG7021822.1 hypothetical protein SDJN02_15550 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-39100Show/hide
Query:  MKIANFHSPCTVFGCFSLLTKQPRYYTLQDLVVWFLRIGDMQANFSSRIVTTPADYRNWHYEKISAQNISIVAVVSVNSNC
        MKIANFHSPCTVFGCFSLLTKQPRYYTLQDLVVWFLRIGDMQANFSSRIVTTPADYRNWHYEKISAQNISIVAVVSVNSNC
Subjt:  MKIANFHSPCTVFGCFSLLTKQPRYYTLQDLVVWFLRIGDMQANFSSRIVTTPADYRNWHYEKISAQNISIVAVVSVNSNC
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATTGCTAACTTTCATTCACCATGCACTGTATTTGGATGTTTTTCTCTTCTTACAAAGCAGCCAAGATATTACACCCTACAGGACTTGGTTGTATGGTTTTTGAG
AATTGGAGACATGCAAGCAAATTTCAGTTCCCGAATTGTCACCACACCGGCAGATTACAGGAACTGGCACTATGAAAAGATCTCAGCACAAAACATCAGTATTGTTGCTG
TTGTCAGTGTCAATTCAAATTGTTAG
mRNA sequenceShow/hide mRNA sequence
AATGAAGATTGCTAACTTTCATTCACCATGCACTGTATTTGGATGTTTTTCTCTTCTTACAAAGCAGCCAAGATATTACACCCTACAGGACTTGGTTGTATGGTTTTTGA
GAATTGGAGACATGCAAGCAAATTTCAGTTCCCGAATTGTCACCACACCGGCAGATTACAGGAACTGGCACTATGAAAAGATCTCAGCACAAAACATCAGTATTGTTGCT
GTTGTCAGTGTCAATTCAAATTGTTAG
Protein sequenceShow/hide protein sequence
MKIANFHSPCTVFGCFSLLTKQPRYYTLQDLVVWFLRIGDMQANFSSRIVTTPADYRNWHYEKISAQNISIVAVVSVNSNC