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Carg12186 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12186
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr11:2617465..2619099
RNA-Seq ExpressionCarg12186
SyntenyCarg12186
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB74486.1 hypothetical protein L484_026180 [Morus notabilis]4.0e-0850Show/hide
Query:  RSGYQPNLWKLLWRKLRRQKRNKTTTYSSGNLIPYDPFSYSHNFDQGNAAEDPDILCRSFSARFAL
        ++G +  +WK+LW K++++KR    + S    +PYDP++YS NFDQG+AA DP+ L RSFSARFA+
Subjt:  RSGYQPNLWKLLWRKLRRQKRNKTTTYSSGNLIPYDPFSYSHNFDQGNAAEDPDILCRSFSARFAL

KAE8653121.1 hypothetical protein Csa_019717, partial [Cucumis sativus]2.8e-2265Show/hide
Query:  KKSSKQTIRLGRWR--SGYQPNLWKLLWRKLRRQKR------NKTTTYSSG-NLIPYDPFSYSHNFDQGNAAEDPDILCRSFSARFALADAASAFFLDNQ
        +K  + TIRLG WR  +  QPN+WK+LWRKLRR+KR      N TT YSSG  LIPYDPFSYS NFDQG A E+ D L RSFSARFALAD ASA FL  Q
Subjt:  KKSSKQTIRLGRWR--SGYQPNLWKLLWRKLRRQKR------NKTTTYSSG-NLIPYDPFSYSHNFDQGNAAEDPDILCRSFSARFALADAASAFFLDNQ

KAG6587950.1 hypothetical protein SDJN03_16515, partial [Cucurbita argyrosperma subsp. sororia]2.8e-13998.37Show/hide
Query:  MESLRLQNGRISSLWTYTNIRAIHLADRDQNHNCIHRKTFTFQDIIVPHELSSSAPPKRTHFDAACNETTPDAPSASTSTAPSPTHRHCCYSQPLMLPAR
        MESLRLQNGRISSLWTYTNIR+IHLADRDQNHNCIHRKTFTFQDIIVPHELSSSAPPKRTHFDAACNETTPDAPSASTSTAPSPTHRHCCYSQPLMLPAR
Subjt:  MESLRLQNGRISSLWTYTNIRAIHLADRDQNHNCIHRKTFTFQDIIVPHELSSSAPPKRTHFDAACNETTPDAPSASTSTAPSPTHRHCCYSQPLMLPAR

Query:  GPNCFAHPKAPSGLPAKAVNHHMEMDPQNPDFILTYNSVRIPNSNHLAALMMGKKSSKQTIRLGRWRSGYQPNLWKLLWRKLRRQKRNKTTTYSSGNLIP
        GPNCFAHPKAPSGLPAKAVNHHMEMDPQNPDFILTYNSVRIPNSNHLAALMMGKKSSKQTIRLGRWRSGYQPNLWK+LWRKLRR+KRNKTTTYSSGNLIP
Subjt:  GPNCFAHPKAPSGLPAKAVNHHMEMDPQNPDFILTYNSVRIPNSNHLAALMMGKKSSKQTIRLGRWRSGYQPNLWKLLWRKLRRQKRNKTTTYSSGNLIP

Query:  YDPFSYSHNFDQGNAAEDPDILCRSFSARFALADAASAFFLDNQLQ
        YDPFSYSHNFDQGNAAE+PDILCRSFSARFALADAASAFFLDNQLQ
Subjt:  YDPFSYSHNFDQGNAAEDPDILCRSFSARFALADAASAFFLDNQLQ

KAG7021839.1 hypothetical protein SDJN02_15567, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-141100Show/hide
Query:  MESLRLQNGRISSLWTYTNIRAIHLADRDQNHNCIHRKTFTFQDIIVPHELSSSAPPKRTHFDAACNETTPDAPSASTSTAPSPTHRHCCYSQPLMLPAR
        MESLRLQNGRISSLWTYTNIRAIHLADRDQNHNCIHRKTFTFQDIIVPHELSSSAPPKRTHFDAACNETTPDAPSASTSTAPSPTHRHCCYSQPLMLPAR
Subjt:  MESLRLQNGRISSLWTYTNIRAIHLADRDQNHNCIHRKTFTFQDIIVPHELSSSAPPKRTHFDAACNETTPDAPSASTSTAPSPTHRHCCYSQPLMLPAR

Query:  GPNCFAHPKAPSGLPAKAVNHHMEMDPQNPDFILTYNSVRIPNSNHLAALMMGKKSSKQTIRLGRWRSGYQPNLWKLLWRKLRRQKRNKTTTYSSGNLIP
        GPNCFAHPKAPSGLPAKAVNHHMEMDPQNPDFILTYNSVRIPNSNHLAALMMGKKSSKQTIRLGRWRSGYQPNLWKLLWRKLRRQKRNKTTTYSSGNLIP
Subjt:  GPNCFAHPKAPSGLPAKAVNHHMEMDPQNPDFILTYNSVRIPNSNHLAALMMGKKSSKQTIRLGRWRSGYQPNLWKLLWRKLRRQKRNKTTTYSSGNLIP

Query:  YDPFSYSHNFDQGNAAEDPDILCRSFSARFALADAASAFFLDNQLQ
        YDPFSYSHNFDQGNAAEDPDILCRSFSARFALADAASAFFLDNQLQ
Subjt:  YDPFSYSHNFDQGNAAEDPDILCRSFSARFALADAASAFFLDNQLQ

PON35164.1 hypothetical protein TorRG33x02_352000 [Trema orientale]4.0e-0858.62Show/hide
Query:  WKLLWRKLRRQKRNKTTTYSSGNLIPYDPFSYSHNFDQGNAAEDPDILCRSFSARFAL
        WK+LW K+ ++KR      SS   +PYDP++YS NFDQG+AA DPD L RSFSARFA+
Subjt:  WKLLWRKLRRQKRNKTTTYSSGNLIPYDPFSYSHNFDQGNAAEDPDILCRSFSARFAL

TrEMBL top hitse value%identityAlignment
A0A0A0LWX3 Uncharacterized protein1.4e-2265Show/hide
Query:  KKSSKQTIRLGRWR--SGYQPNLWKLLWRKLRRQKR------NKTTTYSSG-NLIPYDPFSYSHNFDQGNAAEDPDILCRSFSARFALADAASAFFLDNQ
        +K  + TIRLG WR  +  QPN+WK+LWRKLRR+KR      N TT YSSG  LIPYDPFSYS NFDQG A E+ D L RSFSARFALAD ASA FL  Q
Subjt:  KKSSKQTIRLGRWR--SGYQPNLWKLLWRKLRRQKR------NKTTTYSSG-NLIPYDPFSYSHNFDQGNAAEDPDILCRSFSARFALADAASAFFLDNQ

A0A218WZT1 Uncharacterized protein2.5e-0852.54Show/hide
Query:  WKLLWRKLRRQKRNKTTTYSSGNL-IPYDPFSYSHNFDQGNAAEDPDILCRSFSARFAL
        W++LWRK++ + + +T  +SS +  + YDPF+Y+ NFDQG    DPDIL RSFSARFA+
Subjt:  WKLLWRKLRRQKRNKTTTYSSGNL-IPYDPFSYSHNFDQGNAAEDPDILCRSFSARFAL

A0A2I0IWT9 Uncharacterized protein2.5e-0852.54Show/hide
Query:  WKLLWRKLRRQKRNKTTTYSSGNL-IPYDPFSYSHNFDQGNAAEDPDILCRSFSARFAL
        W++LWRK++ + + +T  +SS +  + YDPF+Y+ NFDQG    DPDIL RSFSARFA+
Subjt:  WKLLWRKLRRQKRNKTTTYSSGNL-IPYDPFSYSHNFDQGNAAEDPDILCRSFSARFAL

A0A2P5AF49 Uncharacterized protein1.9e-0858.62Show/hide
Query:  WKLLWRKLRRQKRNKTTTYSSGNLIPYDPFSYSHNFDQGNAAEDPDILCRSFSARFAL
        WK+LW K+ ++KR      SS   +PYDP++YS NFDQG+AA DPD L RSFSARFA+
Subjt:  WKLLWRKLRRQKRNKTTTYSSGNLIPYDPFSYSHNFDQGNAAEDPDILCRSFSARFAL

W9R638 Uncharacterized protein1.9e-0850Show/hide
Query:  RSGYQPNLWKLLWRKLRRQKRNKTTTYSSGNLIPYDPFSYSHNFDQGNAAEDPDILCRSFSARFAL
        ++G +  +WK+LW K++++KR    + S    +PYDP++YS NFDQG+AA DP+ L RSFSARFA+
Subjt:  RSGYQPNLWKLLWRKLRRQKRNKTTTYSSGNLIPYDPFSYSHNFDQGNAAEDPDILCRSFSARFAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCTTACGACTTCAAAATGGACGGATTTCGTCCTTATGGACATACACAAACATTCGGGCGATTCATTTGGCCGACAGAGACCAGAACCACAATTGTATTCATAG
AAAAACATTCACTTTCCAAGACATCATTGTTCCACACGAGTTGTCTTCATCCGCCCCACCCAAACGTACTCACTTCGATGCAGCCTGCAACGAAACGACCCCGGATGCCC
CGTCGGCGAGCACAAGCACCGCACCTTCGCCGACCCACCGCCATTGCTGCTACTCCCAGCCGCTGATGCTGCCTGCAAGAGGACCCAATTGCTTTGCACACCCAAAAGCT
CCCTCCGGCTTACCAGCCAAGGCCGTAAATCATCATATGGAAATGGATCCACAAAATCCGGACTTCATTTTAACTTATAACTCCGTTCGTATACCAAACTCAAATCATCT
GGCAGCTTTGATGATGGGAAAGAAGAGCAGCAAACAAACCATCAGATTGGGGCGATGGAGAAGCGGGTACCAACCCAATCTGTGGAAGCTGTTATGGAGGAAACTGAGAA
GACAAAAGAGGAACAAAACCACGACGTATTCCTCAGGGAACTTGATTCCTTATGATCCTTTCTCTTATTCACACAATTTCGACCAAGGCAACGCTGCCGAAGATCCCGAT
ATTCTTTGCCGCTCCTTCTCCGCCCGCTTTGCCCTCGCCGATGCTGCTTCCGCCTTCTTTCTTGACAACCAGCTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCTTACGACTTCAAAATGGACGGATTTCGTCCTTATGGACATACACAAACATTCGGGCGATTCATTTGGCCGACAGAGACCAGAACCACAATTGTATTCATAG
AAAAACATTCACTTTCCAAGACATCATTGTTCCACACGAGTTGTCTTCATCCGCCCCACCCAAACGTACTCACTTCGATGCAGCCTGCAACGAAACGACCCCGGATGCCC
CGTCGGCGAGCACAAGCACCGCACCTTCGCCGACCCACCGCCATTGCTGCTACTCCCAGCCGCTGATGCTGCCTGCAAGAGGACCCAATTGCTTTGCACACCCAAAAGCT
CCCTCCGGCTTACCAGCCAAGGCCGTAAATCATCATATGGAAATGGATCCACAAAATCCGGACTTCATTTTAACTTATAACTCCGTTCGTATACCAAACTCAAATCATCT
GGCAGCTTTGATGATGGGAAAGAAGAGCAGCAAACAAACCATCAGATTGGGGCGATGGAGAAGCGGGTACCAACCCAATCTGTGGAAGCTGTTATGGAGGAAACTGAGAA
GACAAAAGAGGAACAAAACCACGACGTATTCCTCAGGGAACTTGATTCCTTATGATCCTTTCTCTTATTCACACAATTTCGACCAAGGCAACGCTGCCGAAGATCCCGAT
ATTCTTTGCCGCTCCTTCTCCGCCCGCTTTGCCCTCGCCGATGCTGCTTCCGCCTTCTTTCTTGACAACCAGCTTCAATAA
Protein sequenceShow/hide protein sequence
MESLRLQNGRISSLWTYTNIRAIHLADRDQNHNCIHRKTFTFQDIIVPHELSSSAPPKRTHFDAACNETTPDAPSASTSTAPSPTHRHCCYSQPLMLPARGPNCFAHPKA
PSGLPAKAVNHHMEMDPQNPDFILTYNSVRIPNSNHLAALMMGKKSSKQTIRLGRWRSGYQPNLWKLLWRKLRRQKRNKTTTYSSGNLIPYDPFSYSHNFDQGNAAEDPD
ILCRSFSARFALADAASAFFLDNQLQ