; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12208 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12208
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRanBP2-type domain-containing protein
Genome locationCarg_Chr11:2707374..2709599
RNA-Seq ExpressionCarg12208
SyntenyCarg12208
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR034870 - TAF15/EWS/TLS family
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587971.1 hypothetical protein SDJN03_16536, partial [Cucurbita argyrosperma subsp. sororia]3.9e-18598.11Show/hide
Query:  TIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYC
        +I + GYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYC
Subjt:  TIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYC

Query:  SDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDR
        SDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSP RAWTRGCSRDIAAGGLAPQRYENRY DLRRDR
Subjt:  SDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDR

Query:  VDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVER
        VDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVER
Subjt:  VDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVER

Query:  EHIYRRGLGQERDGGPF
        EHIYRRGLGQERDGGPF
Subjt:  EHIYRRGLGQERDGGPF

KAG7021861.1 hypothetical protein SDJN02_15589, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-217100Show/hide
Query:  MAMVVNLFGWSFCSCIRENLWRYMDVVQQMSFLYNMLLFLISYKSTTIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTS
        MAMVVNLFGWSFCSCIRENLWRYMDVVQQMSFLYNMLLFLISYKSTTIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTS
Subjt:  MAMVVNLFGWSFCSCIRENLWRYMDVVQQMSFLYNMLLFLISYKSTTIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTS

Query:  PHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIE
        PHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIE
Subjt:  PHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIE

Query:  RSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQR
        RSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQR
Subjt:  RSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQR

Query:  GRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIYRRGLGQERDGGPF
        GRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIYRRGLGQERDGGPF
Subjt:  GRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIYRRGLGQERDGGPF

XP_023004075.1 uncharacterized protein LOC111497489 isoform X2 [Cucurbita maxima]3.5e-21097.25Show/hide
Query:  MAMVVNLFGWSFCSCIRENLWRYMDVVQQMSFLYNMLLFLISYKSTTIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTS
        MAMVVNLFGWSFCSCIRENLWRYMDVV Q+SFLYNMLLFLISYKSTTIFISGYRIH GSASPTRHRDD RYVSDFDRSGDLMRGREFGGRSDHGRYR TS
Subjt:  MAMVVNLFGWSFCSCIRENLWRYMDVVQQMSFLYNMLLFLISYKSTTIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTS

Query:  PHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIE
        PHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRF+AHPIE
Subjt:  PHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIE

Query:  RSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQR
        RSPGRTPNEYRSP RAWTRGCSRDIAAGGLAPQRYENRY DLRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFI ERKGFERRPPSPPLPLLPQR
Subjt:  RSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQR

Query:  GRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIYRRGLGQERDGGPF
        GRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPK+FRRDVFVEREHIYRRGLGQERDGGPF
Subjt:  GRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIYRRGLGQERDGGPF

XP_023004109.1 uncharacterized protein LOC111497489 isoform X3 [Cucurbita maxima]7.5e-18197.12Show/hide
Query:  SGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPL
        +GYRIH GSASPTRHRDD RYVSDFDRSGDLMRGREFGGRSDHGRYR TSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPL
Subjt:  SGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPL

Query:  CDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYL
        CDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRF+AHPIERSPGRTPNEYRSP RAWTRGCSRDIAAGGLAPQRYENRY DLRRDRVDYL
Subjt:  CDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYL

Query:  EDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIY
        EDSFRGRSKFDRPILSDWPLRDHERDEFI ERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPK+FRRDVFVEREHIY
Subjt:  EDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIY

Query:  RRGLGQERDGGPF
        RRGLGQERDGGPF
Subjt:  RRGLGQERDGGPF

XP_023529922.1 uncharacterized protein LOC111792626 isoform X2 [Cucurbita pepo subsp. pepo]4.2e-20896.42Show/hide
Query:  MAMVVNLFGWSFCSCIRENLWRYMDVVQQMSFLYNMLLFLISYKSTTIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTS
        MAMVVNLFGWSFCSCIRENLWRYMDVV Q+SFLYNMLLFLISYKSTTIFISGYRIH GSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYR TS
Subjt:  MAMVVNLFGWSFCSCIRENLWRYMDVVQQMSFLYNMLLFLISYKSTTIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTS

Query:  PHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIE
        PHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNV PRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRG VGGPPSLHSPPRRF+AHPIE
Subjt:  PHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIE

Query:  RSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQR
        RSPGRTPNEYRSP RAWTRGCSRDIAAGGLAPQRYENRY DLRRDRVDYLEDSFRGRSKFDRPILSDWPLR+HERDEFITERKGFERRP SPPLPLLPQR
Subjt:  RSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQR

Query:  GRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIYRRGLGQERDGGPF
        GRWARDVRERSRSPIRDPIRSPLR+SLRSPRGLPPK+FRRDVFVEREHIYRRGLGQERDGGPF
Subjt:  GRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIYRRGLGQERDGGPF

TrEMBL top hitse value%identityAlignment
A0A1S4E3W3 uncharacterized protein LOC103501026 isoform X32.5e-14577.39Show/hide
Query:  MDVVQQMSFLYNMLLFLISYKSTTIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLA
        M VV +M FL   L+FLISY+ TT FISGYRIH GS SP R RD HRY+S+F+ S  L RGREFGG  D  RYR TSPHY RR+ GGRP+GRG D P LA
Subjt:  MDVVQQMSFLYNMLLFLISYKSTTIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLA

Query:  PGPFRGERS-NNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCS
        PGPFRGERS NNPNVRPRDGDWYCSDPLCDNLNF RREFCN CNRPRTG GG PRRG+  GPPSLH+PPRRF+AHPIERSPGRT NEYRSP R+W R  S
Subjt:  PGPFRGERS-NNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCS

Query:  RDIAAGGLAPQRYENRYPD-LRRDRVDYLEDSFRGRSKFDRPILS-DWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIR
        R++AAGGLAP RYE+RY D LRRDRVDYLEDSFRGRSKFDRP+ S DW LRD+ RD+FITERKGFERRPPSPPLPLLPQRGRW+RDVRERSRSPIR PIR
Subjt:  RDIAAGGLAPQRYENRYPD-LRRDRVDYLEDSFRGRSKFDRPILS-DWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIR

Query:  SPLRVSLRSP--RGLPPKEFRRDVFVEREHIYRRGLGQERDGGPF
        SPLRV LRSP   GLPPK+FRRDVF ERE   RRGLG++R+GGPF
Subjt:  SPLRVSLRSP--RGLPPKEFRRDVFVEREHIYRRGLGQERDGGPF

A0A6J1HBF9 uncharacterized protein LOC111461847 isoform X49.3e-16173.93Show/hide
Query:  MAMVVNLFGWSFCSCIRENLWRYMDVVQQMSFLYNMLLFLISYKSTTIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTS
        MAMVV+ FGWSFCSCIRENLWRYM VV ++ FL NMLLFLISY+ T  FISGYR+H GS SPTR RDDHRY+SDFD S  L RGREFGG  D GRYR TS
Subjt:  MAMVVNLFGWSFCSCIRENLWRYMDVVQQMSFLYNMLLFLISYKSTTIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTS

Query:  PHYSRRISGGRPYGRGFDSPGLAPGPFRGERS-NNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPI
        PHYSRR+SGGRP+GRGFD PG APGPFRGERS NNPNVRPRDGDWYCSDPLCDNLNF RREFCN CNRPRTGAGG PRRG   GPPSLHSPPRRF+AHPI
Subjt:  PHYSRRISGGRPYGRGFDSPGLAPGPFRGERS-NNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPI

Query:  ERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPD--LRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPS------
        ERSPGRT NEYRSP R W R   R+IAAGGLAP RYE+RY D  LRRDRVDYLEDSFRGRSKFDR   SDW LRD+ RD+FI ERKGFERRP S      
Subjt:  ERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPD--LRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPS------

Query:  -------------------------PPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSP--RGLPPKEFRRDVFVEREHIYRRGLGQERDGGPF
                                 PPL LLPQRGRWARDVRERSRSPIR P+RSPLRV LRSP   GLPPK++RRDVFVERE   RRGLG++RDGGPF
Subjt:  -------------------------PPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSP--RGLPPKEFRRDVFVEREHIYRRGLGQERDGGPF

A0A6J1KR28 uncharacterized protein LOC111497489 isoform X16.2e-18197.44Show/hide
Query:  GYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLC
        GYRIH GSASPTRHRDD RYVSDFDRSGDLMRGREFGGRSDHGRYR TSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLC
Subjt:  GYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLC

Query:  DNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYLE
        DNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRF+AHPIERSPGRTPNEYRSP RAWTRGCSRDIAAGGLAPQRYENRY DLRRDRVDYLE
Subjt:  DNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYLE

Query:  DSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIYR
        DSFRGRSKFDRPILSDWPLRDHERDEFI ERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPK+FRRDVFVEREHIYR
Subjt:  DSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIYR

Query:  RGLGQERDGGPF
        RGLGQERDGGPF
Subjt:  RGLGQERDGGPF

A0A6J1KTN3 uncharacterized protein LOC111497489 isoform X21.7e-21097.25Show/hide
Query:  MAMVVNLFGWSFCSCIRENLWRYMDVVQQMSFLYNMLLFLISYKSTTIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTS
        MAMVVNLFGWSFCSCIRENLWRYMDVV Q+SFLYNMLLFLISYKSTTIFISGYRIH GSASPTRHRDD RYVSDFDRSGDLMRGREFGGRSDHGRYR TS
Subjt:  MAMVVNLFGWSFCSCIRENLWRYMDVVQQMSFLYNMLLFLISYKSTTIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTS

Query:  PHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIE
        PHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRF+AHPIE
Subjt:  PHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIE

Query:  RSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQR
        RSPGRTPNEYRSP RAWTRGCSRDIAAGGLAPQRYENRY DLRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFI ERKGFERRPPSPPLPLLPQR
Subjt:  RSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQR

Query:  GRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIYRRGLGQERDGGPF
        GRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPK+FRRDVFVEREHIYRRGLGQERDGGPF
Subjt:  GRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIYRRGLGQERDGGPF

A0A6J1KVA4 uncharacterized protein LOC111497489 isoform X33.6e-18197.12Show/hide
Query:  SGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPL
        +GYRIH GSASPTRHRDD RYVSDFDRSGDLMRGREFGGRSDHGRYR TSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPL
Subjt:  SGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPL

Query:  CDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYL
        CDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRF+AHPIERSPGRTPNEYRSP RAWTRGCSRDIAAGGLAPQRYENRY DLRRDRVDYL
Subjt:  CDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDRVDYL

Query:  EDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIY
        EDSFRGRSKFDRPILSDWPLRDHERDEFI ERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPK+FRRDVFVEREHIY
Subjt:  EDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKEFRRDVFVEREHIY

Query:  RRGLGQERDGGPF
        RRGLGQERDGGPF
Subjt:  RRGLGQERDGGPF

SwissProt top hitse value%identityAlignment
P35637 RNA-binding protein FUS3.3e-0629.78Show/hide
Query:  DLMRGREFGGRSDHGRYRVTSPHYSRRISGGR-------PYGRGFDSPGLAPGPFRG---ERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPR
        D   G+EF G      +      ++R    GR       P GRG    G + G  RG           + R GDW C +P C+N+NF  R  CN+C  P+
Subjt:  DLMRGREFGGRSDHGRYRVTSPHYSRRISGGR-------PYGRGFDSPGLAPGPFRG---ERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPR

Query:  -TGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDR
          G GG P   H+GG    +   RR      +R   R     R   R    G  R    GG  P + ++R  + R+DR
Subjt:  -TGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDR

P56959 RNA-binding protein FUS2.0e-0633.04Show/hide
Query:  DLMRGREFGGRSDHGRYRVTSPHYSRRISGGR-------PYGRGFDSPGLAPGPFRG---ERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPR
        D   G+EF G      +      ++R    GR       P GRG    G + G  RG           + R GDW C +P C+N+NF  R  CN+C  P+
Subjt:  DLMRGREFGGRSDHGRYRVTSPHYSRRISGGR-------PYGRGFDSPGLAPGPFRG---ERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPR

Query:  -TGAGGRPRRGHVGG
          G GG P   H+GG
Subjt:  -TGAGGRPRRGHVGG

Q28009 RNA-binding protein FUS3.3e-0629.78Show/hide
Query:  DLMRGREFGGRSDHGRYRVTSPHYSRRISGGR-------PYGRGFDSPGLAPGPFRG---ERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPR
        D   G+EF G      +      ++R    GR       P GRG    G + G  RG           + R GDW C +P C+N+NF  R  CN+C  P+
Subjt:  DLMRGREFGGRSDHGRYRVTSPHYSRRISGGR-------PYGRGFDSPGLAPGPFRG---ERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPR

Query:  -TGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDR
          G GG P   H+GG    +   RR      +R   R     R   R    G  R    GG  P + ++R  + R+DR
Subjt:  -TGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYENRYPDLRRDR

Q92804 TATA-binding protein-associated factor 2N5.7e-0634.62Show/hide
Query:  DLMRGREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRG
        D   G+EF G      +    P + R   GG   GR         G F+G   +     P+ GDW C +P C N+NF RR  CN+CN PR     RP  G
Subjt:  DLMRGREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRG

Query:  HVGG
           G
Subjt:  HVGG

Arabidopsis top hitse value%identityAlignment
AT4G28990.1 RNA-binding protein-related8.4e-3738.89Show/hide
Query:  GYRIHPGSASPTRH-RDDHRYVSDFDRSGDLMRGREFGGRSD-HGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDP
        G+R    S+SP R   +DH++ SD + SG   RGRE   R +  GR+R  SP  +R  +G RPY RG D P    G     R+N   V+PR+GDWYC DP
Subjt:  GYRIHPGSASPTRH-RDDHRYVSDFDRSGDLMRGREFGGRSD-HGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDP

Query:  LCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYEN-RYPDLRRDRVD
        LC NLNF RRE C KC R R      P    +  PP  HSP R F             N YRSP R W R            P R+++  + D  RDR  
Subjt:  LCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYEN-RYPDLRRDRVD

Query:  YLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRS-PIRDPIRSPLR----VSLRSPRGLPP--KEFRRD
        Y +  +       R I SDW   +         +  ++RRPP  P    P+ GRW R +RERSRS P+RD    PLR     SLR   G PP  +++RRD
Subjt:  YLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRS-PIRDPIRSPLR----VSLRSPRGLPP--KEFRRD

Query:  VFVERE
           +RE
Subjt:  VFVERE

AT4G28990.2 RNA-binding protein-related8.4e-3738.89Show/hide
Query:  GYRIHPGSASPTRH-RDDHRYVSDFDRSGDLMRGREFGGRSD-HGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDP
        G+R    S+SP R   +DH++ SD + SG   RGRE   R +  GR+R  SP  +R  +G RPY RG D P    G     R+N   V+PR+GDWYC DP
Subjt:  GYRIHPGSASPTRH-RDDHRYVSDFDRSGDLMRGREFGGRSD-HGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDP

Query:  LCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYEN-RYPDLRRDRVD
        LC NLNF RRE C KC R R      P    +  PP  HSP R F             N YRSP R W R            P R+++  + D  RDR  
Subjt:  LCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRGCSRDIAAGGLAPQRYEN-RYPDLRRDRVD

Query:  YLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRS-PIRDPIRSPLR----VSLRSPRGLPP--KEFRRD
        Y +  +       R I SDW   +         +  ++RRPP  P    P+ GRW R +RERSRS P+RD    PLR     SLR   G PP  +++RRD
Subjt:  YLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRS-PIRDPIRSPLR----VSLRSPRGLPP--KEFRRD

Query:  VFVERE
           +RE
Subjt:  VFVERE

AT5G58470.1 TBP-associated factor 15B3.2e-0434.34Show/hide
Query:  GREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNR---PRTGAGGRPRRG
        G  +GGR  +G              GG    RG    G   G   G  S       RDGDW C +P C N+NF RR  CNKC       T +G   R G
Subjt:  GREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNR---PRTGAGGRPRRG

AT5G58470.2 TBP-associated factor 15B3.2e-0434.34Show/hide
Query:  GREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNR---PRTGAGGRPRRG
        G  +GGR  +G              GG    RG    G   G   G  S       RDGDW C +P C N+NF RR  CNKC       T +G   R G
Subjt:  GREFGGRSDHGRYRVTSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNR---PRTGAGGRPRRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGTTGTCAATTTGTTTGGATGGTCCTTTTGCAGTTGTATCAGGGAAAATCTTTGGAGATATATGGACGTTGTACAGCAAATGAGCTTCCTATACAATATGTT
ACTTTTCTTAATATCTTATAAATCCACTACCATCTTTATTTCAGGATATAGAATACATCCAGGTTCAGCTTCTCCAACACGTCATCGGGATGATCACCGGTATGTTTCTG
ATTTTGATCGTTCTGGTGATCTCATGCGGGGCCGTGAATTTGGAGGCAGGAGCGATCATGGTAGATATCGAGTGACTTCACCCCATTACAGTCGAAGAATAAGTGGTGGC
AGGCCATATGGGAGAGGTTTTGATAGCCCTGGACTTGCTCCTGGGCCATTTAGAGGGGAACGTAGTAATAATCCAAATGTGCGTCCTAGGGATGGGGATTGGTATTGCTC
AGATCCTTTATGTGACAACCTAAACTTTGGAAGACGAGAATTTTGTAACAAATGCAACAGACCCCGCACTGGAGCTGGTGGAAGACCTCGAAGAGGCCATGTTGGTGGTC
CACCGTCCCTGCATTCTCCTCCTAGACGCTTTAGTGCCCACCCAATTGAACGTTCTCCTGGCAGGACTCCTAATGAATATAGGTCTCCTCTCCGTGCTTGGACCAGGGGT
TGTTCCAGGGACATTGCAGCTGGTGGTCTGGCACCTCAGAGGTATGAAAACAGGTACCCAGACCTGCGGAGGGATCGGGTGGATTATCTAGAAGACAGCTTCAGAGGAAG
ATCCAAGTTCGACAGGCCAATTCTTTCCGATTGGCCCCTTAGAGACCATGAAAGAGATGAGTTCATCACCGAGAGGAAGGGATTCGAAAGAAGGCCACCATCCCCACCAC
TGCCGTTGCTTCCTCAACGTGGCCGCTGGGCACGTGATGTGAGAGAGAGGAGCCGCTCCCCAATTAGAGATCCAATTAGATCTCCATTGAGAGTCTCGCTTCGGTCTCCA
CGCGGCCTTCCACCAAAAGAGTTCCGTAGAGATGTGTTTGTCGAAAGGGAGCACATTTATAGGCGCGGCCTTGGACAAGAGCGCGATGGAGGTCCATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGTTGTCAATTTGTTTGGATGGTCCTTTTGCAGTTGTATCAGGGAAAATCTTTGGAGATATATGGACGTTGTACAGCAAATGAGCTTCCTATACAATATGTT
ACTTTTCTTAATATCTTATAAATCCACTACCATCTTTATTTCAGGATATAGAATACATCCAGGTTCAGCTTCTCCAACACGTCATCGGGATGATCACCGGTATGTTTCTG
ATTTTGATCGTTCTGGTGATCTCATGCGGGGCCGTGAATTTGGAGGCAGGAGCGATCATGGTAGATATCGAGTGACTTCACCCCATTACAGTCGAAGAATAAGTGGTGGC
AGGCCATATGGGAGAGGTTTTGATAGCCCTGGACTTGCTCCTGGGCCATTTAGAGGGGAACGTAGTAATAATCCAAATGTGCGTCCTAGGGATGGGGATTGGTATTGCTC
AGATCCTTTATGTGACAACCTAAACTTTGGAAGACGAGAATTTTGTAACAAATGCAACAGACCCCGCACTGGAGCTGGTGGAAGACCTCGAAGAGGCCATGTTGGTGGTC
CACCGTCCCTGCATTCTCCTCCTAGACGCTTTAGTGCCCACCCAATTGAACGTTCTCCTGGCAGGACTCCTAATGAATATAGGTCTCCTCTCCGTGCTTGGACCAGGGGT
TGTTCCAGGGACATTGCAGCTGGTGGTCTGGCACCTCAGAGGTATGAAAACAGGTACCCAGACCTGCGGAGGGATCGGGTGGATTATCTAGAAGACAGCTTCAGAGGAAG
ATCCAAGTTCGACAGGCCAATTCTTTCCGATTGGCCCCTTAGAGACCATGAAAGAGATGAGTTCATCACCGAGAGGAAGGGATTCGAAAGAAGGCCACCATCCCCACCAC
TGCCGTTGCTTCCTCAACGTGGCCGCTGGGCACGTGATGTGAGAGAGAGGAGCCGCTCCCCAATTAGAGATCCAATTAGATCTCCATTGAGAGTCTCGCTTCGGTCTCCA
CGCGGCCTTCCACCAAAAGAGTTCCGTAGAGATGTGTTTGTCGAAAGGGAGCACATTTATAGGCGCGGCCTTGGACAAGAGCGCGATGGAGGTCCATTTTAGCGTTGAAA
ATTGAGCAGCACCCCGTAATCTGTGTTTACAGCCTTGGAAAGAGGATGTTAAGAAGAGCCTGCTTAATTTTTTCCTGACAGGCCCTGTGTGTCGAAACCTGCTATTGGGG
TCCTCTATCTTCTGCCTCGTGTATTTCGTATTTCGTATTTCTTCTTATTATTGTATGGTGTAGTTAGTTGTTGACAGCCTTCAAACATATTGAAGTAAATGCCTTCCATA
TATACGGTGTATCTTTGGTTTATTGGTCAGGCTGTAGTTTGGATTTTGCTACTTGGAGGGAGCCACCTCTGTTTGGTTCTTTTTCAGTGATCGGATCAGACAGAGAAGAT
CTACAAATTTTGAGGACAGTTGCTTGCTTTTCACGCAGTGTTCGTTAGATAACACGATCTTACATGAACCTTGACGTTTATTAACTAATACGTTTCTACACGAGCCTCGA
CTTTATTTTTGCTAAGAAATATTTTATCAAGGTCAATTACTTATATACTGTAATAATAAGGTTGAAATAACAAGAAAGTCAACAAAAAAAATTA
Protein sequenceShow/hide protein sequence
MAMVVNLFGWSFCSCIRENLWRYMDVVQQMSFLYNMLLFLISYKSTTIFISGYRIHPGSASPTRHRDDHRYVSDFDRSGDLMRGREFGGRSDHGRYRVTSPHYSRRISGG
RPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFSAHPIERSPGRTPNEYRSPLRAWTRG
CSRDIAAGGLAPQRYENRYPDLRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFITERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSP
RGLPPKEFRRDVFVEREHIYRRGLGQERDGGPF