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Carg12223 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12223
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionninja-family protein mc410-like
Genome locationCarg_Chr11:2786221..2787164
RNA-Seq ExpressionCarg12223
SyntenyCarg12223
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587983.1 E3 ubiquitin-protein ligase ATL42, partial [Cucurbita argyrosperma subsp. sororia]7.0e-6678.61Show/hide
Query:  MIAAQMFSTLSRAWDKSCSESIFHLNRAKFAEMELKKLTNAESLGFEISFQIRIAVLLGRVVGSFTRVSNPLYNDAIIQFFFHDIKLQKAIIRREGSQSC
        MIAAQMFSTLSRAWDKSCSESIFHLNRAKFAEMELKKLTNAESLGFEISFQIRIAVLLGRVVGSFTRVSNPL                            
Subjt:  MIAAQMFSTLSRAWDKSCSESIFHLNRAKFAEMELKKLTNAESLGFEISFQIRIAVLLGRVVGSFTRVSNPLYNDAIIQFFFHDIKLQKAIIRREGSQSC

Query:  CDKIQTWGCLCR--QRTIIITLQGSTLEAAASNKEKEVLIKHEARECNSEEQRCLGPCQATDYPLSLSATEGTMITQIKEEMEMKRS
                CLC    RTIIITLQGSTLEAAASNKEKEVLIKHEARECNSEEQRCLGPCQATDYPLSLSATEGTMITQIKEEMEMKRS
Subjt:  CDKIQTWGCLCR--QRTIIITLQGSTLEAAASNKEKEVLIKHEARECNSEEQRCLGPCQATDYPLSLSATEGTMITQIKEEMEMKRS
KAG7021876.1 hypothetical protein SDJN02_15604, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-97100Show/hide
Query:  MIAAQMFSTLSRAWDKSCSESIFHLNRAKFAEMELKKLTNAESLGFEISFQIRIAVLLGRVVGSFTRVSNPLYNDAIIQFFFHDIKLQKAIIRREGSQSC
        MIAAQMFSTLSRAWDKSCSESIFHLNRAKFAEMELKKLTNAESLGFEISFQIRIAVLLGRVVGSFTRVSNPLYNDAIIQFFFHDIKLQKAIIRREGSQSC
Subjt:  MIAAQMFSTLSRAWDKSCSESIFHLNRAKFAEMELKKLTNAESLGFEISFQIRIAVLLGRVVGSFTRVSNPLYNDAIIQFFFHDIKLQKAIIRREGSQSC

Query:  CDKIQTWGCLCRQRTIIITLQGSTLEAAASNKEKEVLIKHEARECNSEEQRCLGPCQATDYPLSLSATEGTMITQIKEEMEMKRS
        CDKIQTWGCLCRQRTIIITLQGSTLEAAASNKEKEVLIKHEARECNSEEQRCLGPCQATDYPLSLSATEGTMITQIKEEMEMKRS
Subjt:  CDKIQTWGCLCRQRTIIITLQGSTLEAAASNKEKEVLIKHEARECNSEEQRCLGPCQATDYPLSLSATEGTMITQIKEEMEMKRS
XP_022931798.1 ninja-family protein mc410-like [Cucurbita moschata]2.2e-11100Show/hide
Query:  EMELKKLTNAESLGFEISFQIRIAVLLGRVVGSFTRVSNPL
        EMELKKLTNAESLGFEISFQIRIAVLLGRVVGSFTRVSNPL
Subjt:  EMELKKLTNAESLGFEISFQIRIAVLLGRVVGSFTRVSNPL
TrEMBL top hitse value%identityAlignment
A0A6J1EZS4 ninja-family protein mc410-like1.1e-11100Show/hide
Query:  EMELKKLTNAESLGFEISFQIRIAVLLGRVVGSFTRVSNPL
        EMELKKLTNAESLGFEISFQIRIAVLLGRVVGSFTRVSNPL
Subjt:  EMELKKLTNAESLGFEISFQIRIAVLLGRVVGSFTRVSNPL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGCTGCTCAAATGTTCTCAACCTTGTCCAGAGCCTGGGATAAATCATGTTCTGAATCCATATTCCATCTGAATAGAGCCAAATTTGCAGAAATGGAGCTCAAGAA
GTTGACAAATGCCGAATCTCTTGGGTTCGAAATTTCATTTCAGATTAGAATAGCTGTTTTGCTCGGCAGAGTAGTTGGAAGTTTCACACGTGTCAGCAACCCGCTTTATA
ATGATGCCATTATTCAATTCTTTTTCCATGACATAAAGCTACAAAAGGCAATCATTCGGAGGGAAGGCAGCCAGAGCTGCTGTGACAAGATTCAAACATGGGGCTGTTTG
TGCAGACAGAGGACGATCATCATAACTCTTCAAGGCTCAACATTGGAAGCAGCAGCTTCAAATAAGGAAAAAGAAGTCTTGATCAAACATGAAGCCAGGGAATGCAACAG
CGAGGAGCAGAGATGCTTGGGGCCATGTCAAGCAACAGATTATCCTCTTTCGCTGTCTGCAACTGAGGGCACAATGATTACACAGATCAAGGAAGAGATGGAAATGAAGA
GATCA
mRNA sequenceShow/hide mRNA sequence
ATGATAGCTGCTCAAATGTTCTCAACCTTGTCCAGAGCCTGGGATAAATCATGTTCTGAATCCATATTCCATCTGAATAGAGCCAAATTTGCAGAAATGGAGCTCAAGAA
GTTGACAAATGCCGAATCTCTTGGGTTCGAAATTTCATTTCAGATTAGAATAGCTGTTTTGCTCGGCAGAGTAGTTGGAAGTTTCACACGTGTCAGCAACCCGCTTTATA
ATGATGCCATTATTCAATTCTTTTTCCATGACATAAAGCTACAAAAGGCAATCATTCGGAGGGAAGGCAGCCAGAGCTGCTGTGACAAGATTCAAACATGGGGCTGTTTG
TGCAGACAGAGGACGATCATCATAACTCTTCAAGGCTCAACATTGGAAGCAGCAGCTTCAAATAAGGAAAAAGAAGTCTTGATCAAACATGAAGCCAGGGAATGCAACAG
CGAGGAGCAGAGATGCTTGGGGCCATGTCAAGCAACAGATTATCCTCTTTCGCTGTCTGCAACTGAGGGCACAATGATTACACAGATCAAGGAAGAGATGGAAATGAAGA
GATCA
Protein sequenceShow/hide protein sequence
MIAAQMFSTLSRAWDKSCSESIFHLNRAKFAEMELKKLTNAESLGFEISFQIRIAVLLGRVVGSFTRVSNPLYNDAIIQFFFHDIKLQKAIIRREGSQSCCDKIQTWGCL
CRQRTIIITLQGSTLEAAASNKEKEVLIKHEARECNSEEQRCLGPCQATDYPLSLSATEGTMITQIKEEMEMKRS