CuGenDBv2

Gene ID	Carg12251
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Derlin
Genome location	Carg_Chr11:2933430..2936979
RNA-Seq Expression	Carg12251
Synteny	Carg12251
Gene Ontology terms	GO:0030433 - ubiquitin-dependent ERAD pathway (biological process) GO:0030968 - endoplasmic reticulum unfolded protein response (biological process) GO:0000839 - Hrd1p ubiquitin ligase ERAD-L complex (cellular component) GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component) GO:0051787 - misfolded protein binding (molecular function) GO:1990381 - ubiquitin-specific protease binding (molecular function)
InterPro domains	IPR007599 - Derlin IPR035952 - Rhomboid-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6588009.1 Derlin-1, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-128

96.39

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Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FGALTLL       VLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
        GKNILKTPFW  RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
Subjt:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG

KAG7021903.1 Derlin-1 [Cucurbita argyrosperma subsp. argyrosperma]

7.7e-137

100

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Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFWRLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
        GKNILKTPFWRLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
Subjt:  GKNILKTPFWRLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG

XP_022931760.1 derlin-1-like [Cucurbita moschata]

3.3e-127

95.58

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Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSPAEYYNSLPPISK YGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FGALTLL       VLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
        GKNILKTPFW  RLVSRWRIGAPPIQRAAVPD RGTSGAFRGRSYRLNG
Subjt:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG

XP_023005455.1 derlin-1-like [Cucurbita maxima]

3.6e-126

94.38

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Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSPAEYYNSLPPISK YGTLCLLATTAFQLGLLNP F  LHFGL+FKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FGALTLL       VLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
        GKNILKTPFW  RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
Subjt:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG

XP_023531299.1 derlin-1-like [Cucurbita pepo subsp. pepo]

5.6e-127

94.78

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Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSPAEYYNSLPPISK YGTLCLLATT FQLGLLNPNFI LHFGL+FKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FGALTLL       VLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
        GKNILKTPFW  RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
Subjt:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LZA3 Derlin

3.3e-117

88.35

Show/hide

Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSPAE+YNSLPPISK YGTLC LATTAFQLGL +P  I L +GLVFK FQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FG+LTLL       VL+AIPIF    LGISLVFMLLYVWSREFP AQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
        GKNIL+TPFW  RLVSRWRIGAPP+QRAAVPDDRGTSGAFRGRSYRLNG
Subjt:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG

A0A1S3BQ27 Derlin

1.9e-117

88.76

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Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSPAE+YNSLPPISK YGTLCLLATTAFQLGL +P  I L +GLVFK FQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FG LTLL       VL+AIPIF    LGISLVFMLLYVWSREFP AQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
        GKNIL+TPFW  RLVSRWRIGAPP+QRAAVPDDRGTSGAFRGRSYRLNG
Subjt:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG

A0A5D3CDT1 Derlin

1.9e-117

88.76

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Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSPAE+YNSLPPISK YGTLCLLATTAFQLGL +P  I L +GLVFK FQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FG LTLL       VL+AIPIF    LGISLVFMLLYVWSREFP AQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
        GKNIL+TPFW  RLVSRWRIGAPP+QRAAVPDDRGTSGAFRGRSYRLNG
Subjt:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG

A0A6J1F0C5 Derlin

1.6e-127

95.58

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Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSPAEYYNSLPPISK YGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FGALTLL       VLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
        GKNILKTPFW  RLVSRWRIGAPPIQRAAVPD RGTSGAFRGRSYRLNG
Subjt:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG

A0A6J1KXG1 Derlin

1.7e-126

94.38

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Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSPAEYYNSLPPISK YGTLCLLATTAFQLGLLNP F  LHFGL+FKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FGALTLL       VLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
        GKNILKTPFW  RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
Subjt:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG

SwissProt top hits

e value

%identity

Alignment

Q06397 Derlin-1

4.0e-88

67.33

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Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSPAEYYNSLPPISK YGTLC  AT   QL +LNP F+ L++  VFK+FQ+WRLFT+FFFLGKFSINFGIRLLMIARYGVQLE G F++RTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FGA++LL        LSAIP     FLG+ +V MLLYVWSRE+P +QI++YGLV L++FYLPWAML LDVIFGS ++P LLGIL GH YYFL+VLHPLA 
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFW--RLVSRWRIGA---PPIQRAAVPDDRGTSGAFRGRSYRLN
        GKN LKTP W  ++V+R+RIG     P++ AA       SGAFRGRSYRL+
Subjt:  GKNILKTPFW--RLVSRWRIGA---PPIQRAAVPDDRGTSGAFRGRSYRLN

Q4G2J5 Derlin-1.2

6.0e-84

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Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSPAEYY SLPPISK YGTLC   T   +L +LNP F+ L++  VFK+F+VWR+FT+FFFLG FSINFGIRLLMIARYGV LE G F +RTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FGA++LL       VLS IP   +  LG+ +V ML+YVWSRE P AQINIYG++ LKAFYLPW ML LDVIFGSPL+P LLGI+ GHLYY+  VLHPLA 
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFW--RLVSRWRIG--APPIQRAAVPDDRGTSGAFRGRSYRLN
        GKN LKTP W  ++V+R+RIG  A    RA    + GT GAFRGRSYRLN
Subjt:  GKNILKTPFW--RLVSRWRIG--APPIQRAAVPDDRGTSGAFRGRSYRLN

Q4G2J6 Derlin-1.1

2.3e-83

65.46

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Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSPAEYY SLPPISK YGTLC   T   QL +L+P F+ L + LVFK+F++WRL T+FFFL  FS+ FGIRLLMIARYGV LE G F +RTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FGA++LL       VLS IP+F S FLGI +V MLLYVWSRE P AQINIYGLV L++FYLPWAML LDVIFGS L+P LLGI+ GHLYYF  VLHPLA 
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVP-DDRGTSGAFRGRSYRLN
        GK+ LKTP W  ++V+R+RIG         P +    SG FRGRSYRLN
Subjt:  GKNILKTPFW--RLVSRWRIGAPPIQRAAVP-DDRGTSGAFRGRSYRLN

Q54NN1 Probable derlin-2 homolog

1.3e-38

40.95

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Query:  MSSPAE-YYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMM
        M+ P E +Y +LP ++K+Y T C++ + +  LGL+ P  + L+F LVF +++ WRLFTNFFF  +  +NF   +  + R+   LE   F+ R+AD+L+M 
Subjt:  MSSPAE-YYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMM

Query:  IFGALTLLVCED-LYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPL
        IFG+  LL+ +  L+Y      +    FL  S+ FM++YVWSR  P   I+  GL T  A YLPW +L +  +F   L  DLLG +AGH YYFL   +PL
Subjt:  IFGALTLLVCED-LYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPL

Query:  AGGKNILKTP
           + +LKTP
Subjt:  AGGKNILKTP

Q8VZU9 Derlin-1

8.7e-91

66.79

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Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSP E+YNSLPPI+K YGTLC   T A QLGL+ P  I L   LV K+FQ+WRL TN FFLG FSINFGIRLLMIARYGVQLE GPF+RRTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FG+ TLL       VLS IP F++ FLG+SLVFMLLY+WSREFP A I++YGLVTLKAFYLPWAMLALDVIFGSP++PDLLGI+AGHLYYFLTVLHPLA 
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFW--RLVSRWRIGAPPIQ-------RAAVPDDRGTSG-----------------AFRGRSYRL
        GKN LKTP W  ++V+RWRIGAP           AA P   G  G                 AFRGRSYRL
Subjt:  GKNILKTPFW--RLVSRWRIGAPPIQ-------RAAVPDDRGTSG-----------------AFRGRSYRL

Arabidopsis top hits

e value

%identity

Alignment

AT4G04860.1 DERLIN-2.2

3.5e-34

37.5

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Query:  EYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALT
        E+Y  +P I++ Y T  ++ T    L +++P  + L+  LV K++Q WRL TNF +  K  ++F   +  +ARY   LE   F+ +TADFL+M++FGA  
Subjt:  EYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALT

Query:  LLVCEDLYYVLSAIPIFYSS-----FLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        L     +  +   IP   +S     FL  SL FM++YVWS++ P   ++  GL T  A YLPW +L   ++ G+    DLLG++AGH YYFL  ++P   
Subjt:  LLVCEDLYYVLSAIPIFYSS-----FLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTP
         +  LKTP
Subjt:  GKNILKTP

AT4G21810.1 DERLIN-2.1

1.7e-33

36.59

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Query:  EYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALT
        E+Y  +P I++ Y T  ++ T    L +++P  + L+  LV K++Q WRL TNF +  K  ++F   +  +ARY   LE   F+ +TADFL+M++FGA  
Subjt:  EYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALT

Query:  LLVCEDLYYVLSAIPIFYSS--FLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAGGKN
        L     +  ++  + + +S   FL  SL FM++YVWS++ P   ++  GL T  A YLPW +L   ++ G+    D LG++AGH YYFL  ++P    + 
Subjt:  LLVCEDLYYVLSAIPIFYSS--FLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAGGKN

Query:  ILKTP
         LKTP
Subjt:  ILKTP

AT4G29330.1 DERLIN-1

6.2e-92

66.79

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Query:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI
        MSSP E+YNSLPPI+K YGTLC   T A QLGL+ P  I L   LV K+FQ+WRL TN FFLG FSINFGIRLLMIARYGVQLE GPF+RRTADFLWMMI
Subjt:  MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMI

Query:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG
        FG+ TLL       VLS IP F++ FLG+SLVFMLLY+WSREFP A I++YGLVTLKAFYLPWAMLALDVIFGSP++PDLLGI+AGHLYYFLTVLHPLA 
Subjt:  FGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAG

Query:  GKNILKTPFW--RLVSRWRIGAPPIQ-------RAAVPDDRGTSG-----------------AFRGRSYRL
        GKN LKTP W  ++V+RWRIGAP           AA P   G  G                 AFRGRSYRL
Subjt:  GKNILKTPFW--RLVSRWRIGAPPIQ-------RAAVPDDRGTSG-----------------AFRGRSYRL

Sequences

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CDS sequence

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ATGTCTTCTCCGGCCGAATATTACAACTCTCTTCCGCCTATAAGTAAGGTGTATGGAACCCTATGCCTTTTGGCGACTACAGCCTTCCAACTTGGCTTGTTAAATCCTAA
TTTTATTGTGTTGCATTTCGGACTCGTATTCAAGCGTTTTCAGGTATGGAGGCTATTCACAAACTTCTTCTTCCTTGGAAAATTCTCTATCAATTTTGGAATTCGTTTAC
TAATGATAGCAAGGTATGGTGTCCAACTTGAGAATGGACCATTTCAGAGGCGAACAGCAGACTTTCTATGGATGATGATATTTGGAGCCTTAACATTATTGGTGTGTGAA
GATCTTTATTATGTACTTTCTGCTATACCAATCTTCTATTCATCATTCTTAGGGATATCACTTGTGTTTATGCTTCTCTACGTCTGGAGTAGAGAATTTCCTACTGCGCA
GATCAACATATATGGCCTTGTGACTCTTAAGGCATTTTATCTGCCATGGGCCATGCTAGCGCTGGATGTCATTTTTGGTTCACCTCTTGTACCTGATTTACTTGGAATCT
TAGCAGGGCATTTGTATTACTTCTTGACCGTGTTACATCCTCTGGCAGGCGGAAAGAACATATTGAAAACTCCATTTTGGAGGTTAGTATCAAGGTGGAGGATAGGAGCA
CCACCAATTCAACGTGCTGCAGTACCTGATGATAGGGGTACAAGTGGAGCTTTCAGAGGGAGGTCATATCGGCTCAATGGCTAA

mRNA sequence

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TTGCTAAGGTTTGTTCGTCTTCAAGCGGTGAAATTCTTTAAAGAAGACTGAGAGATCTCTAGTTCCAAAGCTGCTTCGAGTTTGATTTCTGCTTCTACAATGTCTTCTCC
GGCCGAATATTACAACTCTCTTCCGCCTATAAGTAAGGTGTATGGAACCCTATGCCTTTTGGCGACTACAGCCTTCCAACTTGGCTTGTTAAATCCTAATTTTATTGTGT
TGCATTTCGGACTCGTATTCAAGCGTTTTCAGGTATGGAGGCTATTCACAAACTTCTTCTTCCTTGGAAAATTCTCTATCAATTTTGGAATTCGTTTACTAATGATAGCA
AGGTATGGTGTCCAACTTGAGAATGGACCATTTCAGAGGCGAACAGCAGACTTTCTATGGATGATGATATTTGGAGCCTTAACATTATTGGTGTGTGAAGATCTTTATTA
TGTACTTTCTGCTATACCAATCTTCTATTCATCATTCTTAGGGATATCACTTGTGTTTATGCTTCTCTACGTCTGGAGTAGAGAATTTCCTACTGCGCAGATCAACATAT
ATGGCCTTGTGACTCTTAAGGCATTTTATCTGCCATGGGCCATGCTAGCGCTGGATGTCATTTTTGGTTCACCTCTTGTACCTGATTTACTTGGAATCTTAGCAGGGCAT
TTGTATTACTTCTTGACCGTGTTACATCCTCTGGCAGGCGGAAAGAACATATTGAAAACTCCATTTTGGAGGTTAGTATCAAGGTGGAGGATAGGAGCACCACCAATTCA
ACGTGCTGCAGTACCTGATGATAGGGGTACAAGTGGAGCTTTCAGAGGGAGGTCATATCGGCTCAATGGCTAA

Protein sequence

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MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCE
DLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAGGKNILKTPFWRLVSRWRIGA
PPIQRAAVPDDRGTSGAFRGRSYRLNG

Carg12251 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome