CuGenDBv2

Gene ID	Carg12263
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Helicase ATP-binding domain-containing protein
Genome location	Carg_Chr11:2981803..2983986
RNA-Seq Expression	Carg12263
Synteny	Carg12263
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6588018.1 hypothetical protein SDJN03_16583, partial [Cucurbita argyrosperma subsp. sororia]

6.0e-104

88.84

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Query:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS
        MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLW                         RTVFAAFLFCFAIFLLYS
Subjt:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS

Query:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV
        IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV
Subjt:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV

Query:  DHLLAESSEEIRKLRGYMYSYKAN
        DHLLAESSEEIRKLRGYMYSYKAN
Subjt:  DHLLAESSEEIRKLRGYMYSYKAN

KAG7021915.1 hypothetical protein SDJN02_15643 [Cucurbita argyrosperma subsp. argyrosperma]

1.7e-122

100

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Query:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS
        MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS
Subjt:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS

Query:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV
        IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV
Subjt:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV

Query:  DHLLAESSEEIRKLRGYMYSYKAN
        DHLLAESSEEIRKLRGYMYSYKAN
Subjt:  DHLLAESSEEIRKLRGYMYSYKAN

XP_022927992.1 uncharacterized protein LOC111434892 [Cucurbita moschata]

2.3e-103

88.39

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Query:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS
        MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLW                         RTVFAAFLFCFAIFLLYS
Subjt:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS

Query:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV
        II QVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV
Subjt:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV

Query:  DHLLAESSEEIRKLRGYMYSYKAN
        DHLLAESSEEIRKLRGYMYSYKAN
Subjt:  DHLLAESSEEIRKLRGYMYSYKAN

XP_023002535.1 uncharacterized protein LOC111496345 [Cucurbita maxima]

6.6e-103

87.95

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Query:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS
        MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLW                         RTVFAAFLFCFA+FLLYS
Subjt:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS

Query:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV
        IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFG LSGAGICLYV
Subjt:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV

Query:  DHLLAESSEEIRKLRGYMYSYKAN
        DHLLAESSEEIRKLRGYMYSYKAN
Subjt:  DHLLAESSEEIRKLRGYMYSYKAN

XP_023531869.1 uncharacterized protein LOC111794002 [Cucurbita pepo subsp. pepo]

7.3e-102

87.5

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Query:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS
        MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERA+DQQSLLW                         RTVFAAFLFCFAIFLLYS
Subjt:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS

Query:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV
        II QVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFG LSGAGICLYV
Subjt:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV

Query:  DHLLAESSEEIRKLRGYMYSYKAN
        DHLLAESSEEIRKLRGYMYSYKAN
Subjt:  DHLLAESSEEIRKLRGYMYSYKAN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LYS6 Uncharacterized protein

7.4e-92

78.12

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Query:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS
        MAIKKLAR+LMKSR+  +SLPTRDDPS DDSRPIDSQ QEEMVRS ERANDQQS+LW                         RTVFA FLFC+A FLLYS
Subjt:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS

Query:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV
        I QQ+SSPWELRYHAYFMEDV SWMIIAADWVAILAC+FSIIGIVSKS++HRRWLWCSFFIG LLSVFW YFM+SLP+FRWDVIW P GPLSGAGICLYV
Subjt:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV

Query:  DHLLAESSEEIRKLRGYMYSYKAN
        DHLLAESSEEIRKLRGYMYSYKAN
Subjt:  DHLLAESSEEIRKLRGYMYSYKAN

A0A1S3BQS5 uncharacterized protein LOC103492288 isoform X2

1.4e-93

78.57

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Query:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS
        MAIKKLAR+LMKSR+D +SLPTRDDPS DD RPID+Q QEEMVRSFERANDQQSLLW                         RTVFA FLFC+A FLLYS
Subjt:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS

Query:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV
        I+QQ+SSPWELRYHAYFMEDV SWMIIAADWVAILAC+FSI+GIVSKS++HRRWLWCSFFIG LLSVFW YFM+SLPRFRWDVIW PFGPLSGAGICLYV
Subjt:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV

Query:  DHLLAESSEEIRKLRGYMYSYKAN
        DHLL ESSEEIRKLRGYMYSYKAN
Subjt:  DHLLAESSEEIRKLRGYMYSYKAN

A0A5D3CE29 Uncharacterized protein

1.4e-93

78.57

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Query:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS
        MAIKKLAR+LMKSR+D +SLPTRDDPS DD RPID+Q QEEMVRSFERANDQQSLLW                         RTVFA FLFC+A FLLYS
Subjt:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS

Query:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV
        I+QQ+SSPWELRYHAYFMEDV SWMIIAADWVAILAC+FSI+GIVSKS++HRRWLWCSFFIG LLSVFW YFM+SLPRFRWDVIW PFGPLSGAGICLYV
Subjt:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV

Query:  DHLLAESSEEIRKLRGYMYSYKAN
        DHLL ESSEEIRKLRGYMYSYKAN
Subjt:  DHLLAESSEEIRKLRGYMYSYKAN

A0A6J1EIP3 uncharacterized protein LOC111434892

1.1e-103

88.39

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Query:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS
        MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLW                         RTVFAAFLFCFAIFLLYS
Subjt:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS

Query:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV
        II QVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV
Subjt:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV

Query:  DHLLAESSEEIRKLRGYMYSYKAN
        DHLLAESSEEIRKLRGYMYSYKAN
Subjt:  DHLLAESSEEIRKLRGYMYSYKAN

A0A6J1KP79 uncharacterized protein LOC111496345

3.2e-103

87.95

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Query:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS
        MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLW                         RTVFAAFLFCFA+FLLYS
Subjt:  MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYS

Query:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV
        IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFG LSGAGICLYV
Subjt:  IIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYV

Query:  DHLLAESSEEIRKLRGYMYSYKAN
        DHLLAESSEEIRKLRGYMYSYKAN
Subjt:  DHLLAESSEEIRKLRGYMYSYKAN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26240.1 unknown protein

1.7e-64

55.11

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Query:  IKKLARVLMKSR----EDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLL
        +KKLAR   ++R    +D   LPT +D    DSRPID+Q QEE VR  E A+ QQSL W                         R+VF   L CF  FL 
Subjt:  IKKLARVLMKSR----EDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLL

Query:  YSIIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICL
        YSI QQ  SPWELRYHAYFMED+ SWM+I+A+W+AI+ACS SI+G+  K N HRRW W S  +G  L++FWLY+++ LP+FRWD IW PFGPL GAGICL
Subjt:  YSIIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICL

Query:  YVDHLLAESSEEIRKLRGYMYSYKA
        YVDHLL ESSEE++KLR YMY+YKA
Subjt:  YVDHLLAESSEEIRKLRGYMYSYKA

Sequences

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CDS sequence

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ATGGCGATCAAGAAGTTAGCTAGAGTTTTGATGAAATCTCGGGAAGATGGCTTGTCTCTACCCACTCGGGATGATCCATCCATTGACGATTCCCGTCCCATCGACAGCCA
AGCGCAAGAGGAGATGGTTCGTTCCTTCGAAAGGGCAAATGATCAACAGAGTCTTTTATGGAGGGTATCGTTTGACTGTATATTCATCTACGGATTTTTCCTAATTTTTC
TGTATTCGAAGAAAATTTTGGATTCTCGTACTGTGTTTGCGGCATTTCTTTTTTGCTTCGCGATTTTCCTTCTTTACTCGATCATTCAGCAGGTTTCATCTCCATGGGAA
CTGCGTTATCATGCTTACTTTATGGAGGATGTTAGCTCATGGATGATCATAGCTGCAGATTGGGTTGCTATTTTAGCATGTTCATTTTCGATCATTGGGATTGTTAGCAA
GTCAAATTACCACAGGCGATGGCTATGGTGCTCGTTCTTCATTGGCTTCCTACTCTCAGTTTTCTGGTTATACTTTATGATTAGTTTGCCTAGGTTTCGATGGGATGTTA
TCTGGCGTCCTTTTGGTCCTCTCAGCGGGGCTGGAATCTGTTTGTATGTGGATCATTTGCTGGCCGAATCATCCGAGGAAATACGAAAACTTAGAGGCTATATGTATTCT
TATAAAGCTAACTGA

mRNA sequence

Show/hide mRNA sequence

TATTATTATCATTTGGATTGAGGTAAATGCCAATTGTGCAGTTGTTGACTTAGGAGCAGGACTGGATTGGCTTTGTTGACCTAGAGTTAGCGCTGGTTAGGGTTCGTGAC
GAAGGCGGTGGTTTAGTCTACGGCTATTTGGCTGTGGCTTCTTCAATTTTGGTTGCGAGCCGTGAACCACCTGATCACGGAGTAGGCGATGGCGATCAAGAAGTTAGCTA
GAGTTTTGATGAAATCTCGGGAAGATGGCTTGTCTCTACCCACTCGGGATGATCCATCCATTGACGATTCCCGTCCCATCGACAGCCAAGCGCAAGAGGAGATGGTTCGT
TCCTTCGAAAGGGCAAATGATCAACAGAGTCTTTTATGGAGGGTATCGTTTGACTGTATATTCATCTACGGATTTTTCCTAATTTTTCTGTATTCGAAGAAAATTTTGGA
TTCTCGTACTGTGTTTGCGGCATTTCTTTTTTGCTTCGCGATTTTCCTTCTTTACTCGATCATTCAGCAGGTTTCATCTCCATGGGAACTGCGTTATCATGCTTACTTTA
TGGAGGATGTTAGCTCATGGATGATCATAGCTGCAGATTGGGTTGCTATTTTAGCATGTTCATTTTCGATCATTGGGATTGTTAGCAAGTCAAATTACCACAGGCGATGG
CTATGGTGCTCGTTCTTCATTGGCTTCCTACTCTCAGTTTTCTGGTTATACTTTATGATTAGTTTGCCTAGGTTTCGATGGGATGTTATCTGGCGTCCTTTTGGTCCTCT
CAGCGGGGCTGGAATCTGTTTGTATGTGGATCATTTGCTGGCCGAATCATCCGAGGAAATACGAAAACTTAGAGGCTATATGTATTCTTATAAAGCTAACTGA

Protein sequence

Show/hide protein sequence

MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRVSFDCIFIYGFFLIFLYSKKILDSRTVFAAFLFCFAIFLLYSIIQQVSSPWE
LRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIVSKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYS
YKAN

Carg12263 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome