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Carg12277 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12277
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionhelicase protein MOM1 isoform X3
Genome locationCarg_Chr01:2628748..2634412
RNA-Seq ExpressionCarg12277
SyntenyCarg12277
Gene Ontology termsGO:0004386 - helicase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607145.1 Helicase protein MOM1, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1497.87Show/hide
Query:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
        +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Subjt:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK

KAG7036831.1 Helicase protein MOM1 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-1497.87Show/hide
Query:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
        +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Subjt:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK

KAG7036833.1 hypothetical protein SDJN02_00453, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-127100Show/hide
Query:  MSPSFVNFGTRQKMLVVIDNQDRMMKVIAIYLTLRLMSFGPFSSSQLPLHLVPDDQLFRYAPSFSAVVYKGNKMYEKHKRLEFLPGKSPVVSSCYLLPEV
        MSPSFVNFGTRQKMLVVIDNQDRMMKVIAIYLTLRLMSFGPFSSSQLPLHLVPDDQLFRYAPSFSAVVYKGNKMYEKHKRLEFLPGKSPVVSSCYLLPEV
Subjt:  MSPSFVNFGTRQKMLVVIDNQDRMMKVIAIYLTLRLMSFGPFSSSQLPLHLVPDDQLFRYAPSFSAVVYKGNKMYEKHKRLEFLPGKSPVVSSCYLLPEV

Query:  MMEQTEGKIIYIILLNTCTSNNLLSTGFLHVYQMCNLAALCAPISNAGLLSHHSKRFGIDSYERIDGVLFIPKSKLPLNKLTPENKFLDKDKTADSLSDT
        MMEQTEGKIIYIILLNTCTSNNLLSTGFLHVYQMCNLAALCAPISNAGLLSHHSKRFGIDSYERIDGVLFIPKSKLPLNKLTPENKFLDKDKTADSLSDT
Subjt:  MMEQTEGKIIYIILLNTCTSNNLLSTGFLHVYQMCNLAALCAPISNAGLLSHHSKRFGIDSYERIDGVLFIPKSKLPLNKLTPENKFLDKDKTADSLSDT

Query:  AFLEEVVNDLVLLISQNARSTDEFDSHVILKSSTD
        AFLEEVVNDLVLLISQNARSTDEFDSHVILKSSTD
Subjt:  AFLEEVVNDLVLLISQNARSTDEFDSHVILKSSTD

XP_022949439.1 helicase protein MOM1 isoform X1 [Cucurbita moschata]3.5e-1497.87Show/hide
Query:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
        +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Subjt:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK

XP_022949441.1 helicase protein MOM1 isoform X2 [Cucurbita moschata]3.5e-1497.87Show/hide
Query:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
        +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Subjt:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK

TrEMBL top hitse value%identityAlignment
A0A6J1GC12 helicase protein MOM1 isoform X31.7e-1497.87Show/hide
Query:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
        +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Subjt:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK

A0A6J1GC13 helicase protein MOM1 isoform X21.7e-1497.87Show/hide
Query:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
        +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Subjt:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK

A0A6J1GCT4 helicase protein MOM1 isoform X11.7e-1497.87Show/hide
Query:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
        +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Subjt:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK

A0A6J1K931 helicase protein MOM1 isoform X34.2e-1393.62Show/hide
Query:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
        +KFLDKDKTADSLSDTA LEEVVNDLVLLISQNARSTDE DSHVILK
Subjt:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK

A0A6J1KDL3 helicase protein MOM1 isoform X14.2e-1393.62Show/hide
Query:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
        +KFLDKDKTADSLSDTA LEEVVNDLVLLISQNARSTDE DSHVILK
Subjt:  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCAAGCTTTGTGAATTTTGGCACGAGGCAAAAAATGCTGGTTGTGATTGATAATCAGGATCGCATGATGAAGGTTATTGCAATTTATTTAACTTTGCGCCTGAT
GTCCTTCGGCCCTTTCTCATCATCTCAACTTCCACTGCACTTGGTTCCTGATGATCAGTTATTTCGCTATGCACCGTCTTTCAGTGCTGTAGTTTACAAGGGAAACAAAA
TGTACGAAAAACATAAGAGACTAGAGTTTTTACCAGGGAAATCGCCCGTTGTTTCAAGCTGCTATTTGCTCCCAGAAGTAATGATGGAGCAAACTGAAGGAAAGATTATT
TATATCATACTGCTTAATACCTGCACCTCTAATAATTTGTTGAGTACTGGTTTCCTGCACGTATATCAAATGTGCAATCTTGCAGCTTTATGTGCACCTATTTCTAATGC
TGGATTGCTGTCTCATCATTCAAAAAGGTTTGGGATTGATTCTTATGAACGCATTGATGGGGTCTTATTTATTCCAAAAAGCAAGCTGCCTCTAAACAAATTAACACCAG
AGAATAAGTTCCTTGACAAGGATAAAACTGCAGATTCCTTATCAGATACAGCATTTTTGGAAGAAGTGGTAAATGATTTGGTTTTACTTATTTCACAAAATGCCAGAAGC
ACAGACGAATTTGATTCCCATGTCATATTAAAAAGTTCAACAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACCAAGCTTTGTGAATTTTGGCACGAGGCAAAAAATGCTGGTTGTGATTGATAATCAGGATCGCATGATGAAGGTTATTGCAATTTATTTAACTTTGCGCCTGAT
GTCCTTCGGCCCTTTCTCATCATCTCAACTTCCACTGCACTTGGTTCCTGATGATCAGTTATTTCGCTATGCACCGTCTTTCAGTGCTGTAGTTTACAAGGGAAACAAAA
TGTACGAAAAACATAAGAGACTAGAGTTTTTACCAGGGAAATCGCCCGTTGTTTCAAGCTGCTATTTGCTCCCAGAAGTAATGATGGAGCAAACTGAAGGAAAGATTATT
TATATCATACTGCTTAATACCTGCACCTCTAATAATTTGTTGAGTACTGGTTTCCTGCACGTATATCAAATGTGCAATCTTGCAGCTTTATGTGCACCTATTTCTAATGC
TGGATTGCTGTCTCATCATTCAAAAAGGTTTGGGATTGATTCTTATGAACGCATTGATGGGGTCTTATTTATTCCAAAAAGCAAGCTGCCTCTAAACAAATTAACACCAG
AGAATAAGTTCCTTGACAAGGATAAAACTGCAGATTCCTTATCAGATACAGCATTTTTGGAAGAAGTGGTAAATGATTTGGTTTTACTTATTTCACAAAATGCCAGAAGC
ACAGACGAATTTGATTCCCATGTCATATTAAAAAGTTCAACAGATTGA
Protein sequenceShow/hide protein sequence
MSPSFVNFGTRQKMLVVIDNQDRMMKVIAIYLTLRLMSFGPFSSSQLPLHLVPDDQLFRYAPSFSAVVYKGNKMYEKHKRLEFLPGKSPVVSSCYLLPEVMMEQTEGKII
YIILLNTCTSNNLLSTGFLHVYQMCNLAALCAPISNAGLLSHHSKRFGIDSYERIDGVLFIPKSKLPLNKLTPENKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARS
TDEFDSHVILKSSTD