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Carg12295 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12295
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionauxin-responsive protein SAUR50-like
Genome locationCarg_Chr01:2758495..2758878
RNA-Seq ExpressionCarg12295
SyntenyCarg12295
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607164.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]3.4e-64100Show/hide
Query:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIP
        MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIP
Subjt:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIP

Query:  CQPSEVQRILDEQWKLELKRVRGTSQG
        CQPSEVQRILDEQWKLELKRVRGTSQG
Subjt:  CQPSEVQRILDEQWKLELKRVRGTSQG

XP_004147286.1 auxin-responsive protein SAUR50 [Cucumis sativus]1.4e-4477.42Show/hide
Query:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDF----DMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGA
        MA  +TMK+K  I+VVVEKLQ+ LSR RK ING +NEDF    D T VPEDVKEGHFAVVAVDG+E KRFVVPLSCLTHPMFLRLLE+AAEE+GFDHEGA
Subjt:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDF----DMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGA

Query:  LAIPCQPSEVQRILDEQWKLELKR
        L IPCQPSEV++IL EQWKLE KR
Subjt:  LAIPCQPSEVQRILDEQWKLELKR

XP_022948822.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]3.1e-5795Show/hide
Query:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIP
        MAMFRTMKRKIGIR VVEKLQRRLSRSRKSINGIHNEDFD TRVPEDVKEGHFAVV VDGEEAKRFVVPLSCLTHPMFLRLLEEAAEE+GFDHEGALAIP
Subjt:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIP

Query:  CQPSEVQRILDEQWKLELKR
        C+PSEVQRILDEQWKLELK+
Subjt:  CQPSEVQRILDEQWKLELKR

XP_022998661.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]2.6e-5992.91Show/hide
Query:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIP
        MAMFRTMKRK+GI+ VVEKLQRRLSRSRKS NGIHNEDFD TRVPEDVKEGHFAVVAVDGEEAKRF+VPLSCLTHPMFLRLLEEAAEE+GFDHEGALAIP
Subjt:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIP

Query:  CQPSEVQRILDEQWKLELKRVRGTSQG
        CQPSEVQRILDEQWKLELKRV  TSQG
Subjt:  CQPSEVQRILDEQWKLELKRVRGTSQG

XP_023524585.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]2.6e-5694.17Show/hide
Query:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIP
        MAMFRT+KRKIGIR VV KLQRRLSRSRK INGIHNEDFD TRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEE+GFDHEGALAIP
Subjt:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIP

Query:  CQPSEVQRILDEQWKLELKR
        CQPSEVQRILDEQWKLELK+
Subjt:  CQPSEVQRILDEQWKLELKR

TrEMBL top hitse value%identityAlignment
A0A0A0LSM9 Uncharacterized protein6.6e-4577.42Show/hide
Query:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDF----DMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGA
        MA  +TMK+K  I+VVVEKLQ+ LSR RK ING +NEDF    D T VPEDVKEGHFAVVAVDG+E KRFVVPLSCLTHPMFLRLLE+AAEE+GFDHEGA
Subjt:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDF----DMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGA

Query:  LAIPCQPSEVQRILDEQWKLELKR
        L IPCQPSEV++IL EQWKLE KR
Subjt:  LAIPCQPSEVQRILDEQWKLELKR

A0A1S3CK34 auxin-responsive protein SAUR72-like7.3e-4475.81Show/hide
Query:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDF----DMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGA
        MA  +TMK+K  I+VVVEKLQ+ LSR RK ING +NEDF    D T VPEDVKEGHFAVVAVDGE+ +RFVVPLSCLTHP FLRLLE+AAEE+GFDHEGA
Subjt:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDF----DMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGA

Query:  LAIPCQPSEVQRILDEQWKLELKR
        L IPCQPSEV++IL EQWKLE KR
Subjt:  LAIPCQPSEVQRILDEQWKLELKR

A0A5D3DDN6 Auxin-responsive protein SAUR72-like7.3e-4475.81Show/hide
Query:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDF----DMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGA
        MA  +TMK+K  I+VVVEKLQ+ LSR RK ING +NEDF    D T VPEDVKEGHFAVVAVDGE+ +RFVVPLSCLTHP FLRLLE+AAEE+GFDHEGA
Subjt:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDF----DMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGA

Query:  LAIPCQPSEVQRILDEQWKLELKR
        L IPCQPSEV++IL EQWKLE KR
Subjt:  LAIPCQPSEVQRILDEQWKLELKR

A0A6J1GAA2 auxin-responsive protein SAUR50-like1.5e-5795Show/hide
Query:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIP
        MAMFRTMKRKIGIR VVEKLQRRLSRSRKSINGIHNEDFD TRVPEDVKEGHFAVV VDGEEAKRFVVPLSCLTHPMFLRLLEEAAEE+GFDHEGALAIP
Subjt:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIP

Query:  CQPSEVQRILDEQWKLELKR
        C+PSEVQRILDEQWKLELK+
Subjt:  CQPSEVQRILDEQWKLELKR

A0A6J1KAS5 auxin-responsive protein SAUR50-like1.2e-5992.91Show/hide
Query:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIP
        MAMFRTMKRK+GI+ VVEKLQRRLSRSRKS NGIHNEDFD TRVPEDVKEGHFAVVAVDGEEAKRF+VPLSCLTHPMFLRLLEEAAEE+GFDHEGALAIP
Subjt:  MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIP

Query:  CQPSEVQRILDEQWKLELKRVRGTSQG
        CQPSEVQRILDEQWKLELKRV  TSQG
Subjt:  CQPSEVQRILDEQWKLELKRVRGTSQG

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR505.4e-1242.39Show/hide
Query:  KIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPC
        K+    +++++ +R S   K   G ++ED     +P DV +GHF V    GE   R++VP+S LTHP F  LL+ A EEFGFDH+  L IPC
Subjt:  KIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPC

P0DKL1 Auxin-responsive protein SAUR507.1e-1247.14Show/hide
Query:  GIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQ
        G +N+D   + +P DV +GHF V    GE   R++VP+SCL HP F  LL+ + EEFGF+H+  + IPCQ
Subjt:  GIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQ

P33082 Auxin-induced protein X151.6e-0848.44Show/hide
Query:  DVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHE-GALAIPCQPSEVQRI
        D  +G+ AV    GE+ KRFV+P+S +  P F  LL +A EEFG+DH  G L IPC     QRI
Subjt:  DVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHE-GALAIPCQPSEVQRI

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 101.7e-1039.42Show/hide
Query:  MAMFRTMKRKIGIRVVVEKLQRRLS--RSRKSING-IHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGAL
        MA+ R+ K        ++++ +R S  R  K++NG  +N++ D+   P+DV +GHF V    G    R++VP+S L H  F  LL  A EEFGFDH+  L
Subjt:  MAMFRTMKRKIGIRVVVEKLQRRLS--RSRKSING-IHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGAL

Query:  AIPC
         IPC
Subjt:  AIPC

Q9ZUZ3 Auxin-responsive protein SAUR322.3e-1044.29Show/hide
Query:  EDVKEGHFAV-VAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSE---VQRILD
        +DV +G  A+ V   GEE +RF+VP+    HP+F++LL+EA +E+GFD +G + IPC   E   VQ ++D
Subjt:  EDVKEGHFAV-VAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSE---VQRILD

Arabidopsis top hitse value%identityAlignment
AT2G21220.1 SAUR-like auxin-responsive protein family1.3e-1349.25Show/hide
Query:  NEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQ
        N+ +D   +P DV +GHF V    GE+  R++VP+S LTHP F  LL++A EEFGF+H+  L IPC+
Subjt:  NEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQ

AT2G28085.1 SAUR-like auxin-responsive protein family4.1e-2348.31Show/hide
Query:  MAMFRTMKRKIGIRVVVEKLQRRLSRSR--KSINGIHNEDFDMTRVPEDVKEGHFAVVAVDG--EEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGA
        M    + K+K+G  V ++ +  RL + +   S      E++    VP+DVKEGHFAV+AVDG  E  +RFVVPL  L HPMF +LLE+A EE+GF H+GA
Subjt:  MAMFRTMKRKIGIRVVVEKLQRRLSRSR--KSINGIHNEDFDMTRVPEDVKEGHFAVVAVDG--EEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGA

Query:  LAIPCQPSEVQRILDEQW
        L +PC+PS ++ IL EQW
Subjt:  LAIPCQPSEVQRILDEQW

AT3G09870.1 SAUR-like auxin-responsive protein family4.7e-1946.73Show/hide
Query:  FRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQP
        F+   RK+ I  +  +  +R+    +       E    + +P DVKEGH AV+AV GE  KRFV+ L  L  P FLRLLE+A EEFGF   G L IPCQP
Subjt:  FRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQP

Query:  SEVQRIL
         EVQ+IL
Subjt:  SEVQRIL

AT4G34760.1 SAUR-like auxin-responsive protein family3.8e-1342.39Show/hide
Query:  KIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPC
        K+    +++++ +R S   K   G ++ED     +P DV +GHF V    GE   R++VP+S LTHP F  LL+ A EEFGFDH+  L IPC
Subjt:  KIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPC

AT4G38860.1 SAUR-like auxin-responsive protein family1.5e-1252.31Show/hide
Query:  FDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHE-GALAIPCQ
        +D   +P DV +GHF V    GE+  R++VP+S LTHP FL LL++A EEFGF H+ G L IPC+
Subjt:  FDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHE-GALAIPCQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGTTTAGAACCATGAAGAGGAAGATTGGTATCAGAGTGGTCGTCGAGAAGCTGCAAAGGAGGCTATCACGAAGTCGAAAATCGATCAATGGGATTCATAATGA
GGATTTCGACATGACTAGGGTGCCGGAGGACGTGAAGGAAGGGCATTTTGCGGTGGTGGCGGTGGACGGGGAGGAGGCTAAACGATTCGTCGTTCCGTTGAGTTGTTTGA
CACATCCTATGTTCTTGAGGCTGTTGGAGGAAGCAGCTGAGGAGTTTGGGTTTGATCATGAAGGTGCATTGGCAATTCCATGTCAGCCAAGTGAAGTTCAGAGGATTTTG
GATGAGCAATGGAAGTTGGAGCTTAAAAGAGTCAGGGGAACATCTCAAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTATGTTTAGAACCATGAAGAGGAAGATTGGTATCAGAGTGGTCGTCGAGAAGCTGCAAAGGAGGCTATCACGAAGTCGAAAATCGATCAATGGGATTCATAATGA
GGATTTCGACATGACTAGGGTGCCGGAGGACGTGAAGGAAGGGCATTTTGCGGTGGTGGCGGTGGACGGGGAGGAGGCTAAACGATTCGTCGTTCCGTTGAGTTGTTTGA
CACATCCTATGTTCTTGAGGCTGTTGGAGGAAGCAGCTGAGGAGTTTGGGTTTGATCATGAAGGTGCATTGGCAATTCCATGTCAGCCAAGTGAAGTTCAGAGGATTTTG
GATGAGCAATGGAAGTTGGAGCTTAAAAGAGTCAGGGGAACATCTCAAGGCTAG
Protein sequenceShow/hide protein sequence
MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSEVQRIL
DEQWKLELKRVRGTSQG