; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12328 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12328
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionYrdC-like domain-containing protein
Genome locationCarg_Chr01:2967249..2970281
RNA-Seq ExpressionCarg12328
SyntenyCarg12328
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0006450 - regulation of translational fidelity (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607198.1 YrdC domain-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]4.7e-11798.66Show/hide
Query:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
        MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
Subjt:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV

Query:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA
        VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSV V+DFENLWQHCAYVYDGG+LPAGRAGSTIIDLTKRGTFKIIRA
Subjt:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA

Query:  GSAKEQTVATLERYSLLEEADSAA
        GSAKEQTVATLERYSLLEEADSAA
Subjt:  GSAKEQTVATLERYSLLEEADSAA

KAG7036885.1 YrdC domain-containing protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-119100Show/hide
Query:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
        MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
Subjt:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV

Query:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA
        VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA
Subjt:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA

Query:  GSAKEQTVATLERYSLLEEADSAA
        GSAKEQTVATLERYSLLEEADSAA
Subjt:  GSAKEQTVATLERYSLLEEADSAA

XP_022948702.1 yrdC domain-containing protein, mitochondrial [Cucurbita moschata]3.0e-119100Show/hide
Query:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
        MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
Subjt:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV

Query:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA
        VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA
Subjt:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA

Query:  GSAKEQTVATLERYSLLEEADSAA
        GSAKEQTVATLERYSLLEEADSAA
Subjt:  GSAKEQTVATLERYSLLEEADSAA

XP_022998259.1 yrdC domain-containing protein, mitochondrial [Cucurbita maxima]1.4e-11697.77Show/hide
Query:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
        MRVENSLQALRPASEAFAQEA EALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
Subjt:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV

Query:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA
        VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSG+PSSVCV+DFENLWQHCAYVYDGG+LPAGRAGSTIIDLTKRG FKIIRA
Subjt:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA

Query:  GSAKEQTVATLERYSLLEEADSAA
        GSAKEQTVATLERYSLLEEADSAA
Subjt:  GSAKEQTVATLERYSLLEEADSAA

XP_023521571.1 yrdC domain-containing protein, mitochondrial-like [Cucurbita pepo subsp. pepo]6.2e-11797.77Show/hide
Query:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
        MRVENSLQALRPASEAFAQEA EALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
Subjt:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV

Query:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA
        VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCV+DFENLWQHCAYVYDGG+LPAGRAGSTIIDLTKRGTFKIIRA
Subjt:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA

Query:  GSAKEQTVATLERYSLLEEADSAA
        GSAKEQTVATL+RYSLLE+ADSAA
Subjt:  GSAKEQTVATLERYSLLEEADSAA

TrEMBL top hitse value%identityAlignment
A0A0A0LUP4 YrdC-like domain-containing protein8.7e-10991.82Show/hide
Query:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
        MRVEN LQALRPASEAFAQEA +ALKAGKVIAVPTDTLYGLACDACS+EAV+RIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTV
Subjt:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV

Query:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA
        VLKRGESS+L+KSLNPGL+SIGVRVPDADFIRLISRRS TALALTSANLSGQPSSVCV+DFENLWQHCAYVYDGG+LPAGRAGSTIIDLT++GTFKIIRA
Subjt:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA

Query:  GSAKEQTVATLERYSLLEEA
        GSA+EQT+ATLERYSLLE A
Subjt:  GSAKEQTVATLERYSLLEEA

A0A1S3CNI2 yrdC domain-containing protein, mitochondrial3.1e-10689.09Show/hide
Query:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
        M VEN LQALRPASEAFAQEA +ALKAGKVIAVPTDTLYGLACDACS+EAV+RIYEIKGRKLTSPLAICVG VSDITR+A+ DHLP GLLDSLLPGPVTV
Subjt:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV

Query:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA
        VLKRGESS+L+KSLNPGL+SIGVRVPDADFIRLISRRS TALALTSANLSGQPSSVCV+DFENLWQHCAYVYDGG+LPAGRAGSTI+DLT+RGTFKIIRA
Subjt:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA

Query:  GSAKEQTVATLERYSLLEEA
        GSA++QT+ATL+RYSLLE A
Subjt:  GSAKEQTVATLERYSLLEEA

A0A5A7T5W1 YrdC domain-containing protein3.1e-10689.09Show/hide
Query:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
        M VEN LQALRPASEAFAQEA +ALKAGKVIAVPTDTLYGLACDACS+EAV+RIYEIKGRKLTSPLAICVG VSDITR+A+ DHLP GLLDSLLPGPVTV
Subjt:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV

Query:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA
        VLKRGESS+L+KSLNPGL+SIGVRVPDADFIRLISRRS TALALTSANLSGQPSSVCV+DFENLWQHCAYVYDGG+LPAGRAGSTI+DLT+RGTFKIIRA
Subjt:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA

Query:  GSAKEQTVATLERYSLLEEA
        GSA++QT+ATL+RYSLLE A
Subjt:  GSAKEQTVATLERYSLLEEA

A0A6J1G9Z7 yrdC domain-containing protein, mitochondrial1.4e-119100Show/hide
Query:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
        MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
Subjt:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV

Query:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA
        VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA
Subjt:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA

Query:  GSAKEQTVATLERYSLLEEADSAA
        GSAKEQTVATLERYSLLEEADSAA
Subjt:  GSAKEQTVATLERYSLLEEADSAA

A0A6J1KDV4 yrdC domain-containing protein, mitochondrial6.7e-11797.77Show/hide
Query:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
        MRVENSLQALRPASEAFAQEA EALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV
Subjt:  MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTV

Query:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA
        VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSG+PSSVCV+DFENLWQHCAYVYDGG+LPAGRAGSTIIDLTKRG FKIIRA
Subjt:  VLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRA

Query:  GSAKEQTVATLERYSLLEEADSAA
        GSAKEQTVATLERYSLLEEADSAA
Subjt:  GSAKEQTVATLERYSLLEEADSAA

SwissProt top hitse value%identityAlignment
Q0VC80 YrdC domain-containing protein, mitochondrial6.3e-4849.5Show/hide
Query:  AIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES
        A+  L+AG V+AVPTDTLYGLAC A  SEA+  +Y +KGR  T PLA+C+G V+D+ R+     +P GLL  LLPGPVT+V++R E   L K LNP    
Subjt:  AIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES

Query:  IGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYS
        +G+R+PD  F++ +++  G  LALTSANLS Q SS+ V +F++LW H + + DGG +     P  R GST++DL+  G F IIR G A E T A L+ Y 
Subjt:  IGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYS

Query:  LL
        LL
Subjt:  LL

Q3U5F4 YrdC domain-containing protein, mitochondrial8.6e-4546.67Show/hide
Query:  AIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES
        A+  L+AG V+AVPTDTLYGLAC A SS A++ +Y +KGR    PLA+C+G V+D+ R+     +P  LL+ L PGPVT+V++R E   L K LNP    
Subjt:  AIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES

Query:  IGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATL-ERY
        +G+R+PD  F+  +++  G  LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST++DL+  G F IIR G A E T + L ++Y
Subjt:  IGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATL-ERY

Query:  SLLEEADSAA
         LL    S +
Subjt:  SLLEEADSAA

Q499R4 YrdC domain-containing protein, mitochondrial1.1e-4446.67Show/hide
Query:  AIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES
        A+  L+AG V+AVPTDTLYGLAC A  S A++ +Y +KGR    PLA+C+G V+D+ R+     +P  LL+ L PGPVT+V++R E   L K LNP    
Subjt:  AIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES

Query:  IGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLE-RY
        +G+R+PD  F+  +++  G  LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST++DL+  G F IIR+G A E T A L+ +Y
Subjt:  IGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLE-RY

Query:  SLLEEADSAA
         LL    S +
Subjt:  SLLEEADSAA

Q60369 Putative threonylcarbamoyl-AMP synthase3.9e-2134.07Show/hide
Query:  MRVENSLQALRPASEAFAQEAIEALKA----GKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPG
        M ++N +  +   +E   ++ +E LK     GK++   TDTLYG++ +A + +AV ++Y IK R+   PL+ICV D ++I ++A  + L   ++D  LPG
Subjt:  MRVENSLQALRPASEAFAQEAIEALKA----GKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPG

Query:  PVTVVLKR--GESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFE-NLWQHCAYVYDGG
        P+T++LK+  G   I+ K      + IG+R+PD   IR +S      L  TSAN+SG+ S   V + +  + +   YV D G
Subjt:  PVTVVLKR--GESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFE-NLWQHCAYVYDGG

Q86U90 YrdC domain-containing protein, mitochondrial1.6e-4345.25Show/hide
Query:  SLQALRPASEAFAQ---EAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVL
        ++QA  P    + +    A+  L+AG V+AVPTDTLYGLAC A  S A+  +Y +KGR    PLA+C+G V+D+ R+     +P GLL  LLPGPVT+V+
Subjt:  SLQALRPASEAFAQ---EAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVL

Query:  KRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKI
        +R E   L K LNP    +G+R+PD  F++ +++     LALTSANLS Q SS+ V +F++LW   + V DGG +     P  R GST++DL+  G F I
Subjt:  KRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKI

Query:  IRAGSAKEQTVATL-ERYSLL
        IR G A E T A L ++Y LL
Subjt:  IRAGSAKEQTVATL-ERYSLL

Arabidopsis top hitse value%identityAlignment
AT3G01920.1 DHBP synthase RibB-like alpha/beta domain4.9e-1129.47Show/hide
Query:  QEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHG----------LLDSLLPGPVTVVLKRGESS
        Q  I+ LK G V  +PTDT+Y +ACD  +  AV R+  IK  + + PL+I    + DI  F +    P G           +   LPGP T +L      
Subjt:  QEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHG----------LLDSLLPGPVTVVLKRGESS

Query:  ILEKSLNPGLES--------IGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLW-----QHCAYVYDGGILPAGRAGSTIIDLTKRGTF
        + ++ +  G  S        +GVR+ D    + I ++    L  TS  + G   +  + D   +      +   +V DGGI  A    STI+D+T  G +
Subjt:  ILEKSLNPGLES--------IGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLW-----QHCAYVYDGGILPAGRAGSTIIDLTKRGTF

Query:  -KIIRAG
         K+IR G
Subjt:  -KIIRAG

AT5G60590.1 DHBP synthase RibB-like alpha/beta domain9.4e-3981.05Show/hide
Query:  LRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKR
        + PA+EA+AQEAIEA+K+ KVIAVPTDTLYG ACDACS EAV+RIYEIKGRKLTSPLAICVGDV DI R A   HLPHGLLDSLLPGPVT+VL+R
Subjt:  LRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKR

AT5G60590.2 DHBP synthase RibB-like alpha/beta domain3.3e-9278.3Show/hide
Query:  LRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSI
        + PA+EA+AQEAIEA+K+ KVIAVPTDTLYG ACDACS EAV+RIYEIKGRKLTSPLAICVGDV DI R A   HLPHGLLDSLLPGPVT+VL+RGESSI
Subjt:  LRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSI

Query:  LEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVA
        LEKSLNPG+ +IGVRVPD +FIR +SR SG+ LALTSANLSG  SSVCV DFENLWQHCAYVYDGG+LP+GRAGSTI+DLTK G +KIIR GSAK+ TVA
Subjt:  LEKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVA

Query:  TLERYSLLEEAD
         LE+Y L EE +
Subjt:  TLERYSLLEEAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGTGGAGAACAGTTTGCAAGCTCTTCGCCCTGCCTCTGAAGCTTTTGCTCAAGAAGCTATTGAAGCTCTTAAGGCTGGGAAGGTTATTGCAGTCCCCACTGATAC
TCTTTACGGACTCGCTTGTGATGCTTGTTCTTCTGAAGCAGTCAATAGAATTTACGAAATTAAAGGACGTAAACTTACGAGCCCTCTCGCCATTTGTGTTGGCGATGTCT
CTGACATAACTCGTTTTGCTGTAGCAGACCATTTGCCTCATGGTTTGCTCGATTCTCTCCTTCCAGGACCGGTGACCGTTGTACTAAAAAGAGGCGAGTCGAGTATTCTT
GAGAAGTCTCTGAACCCTGGATTGGAGAGTATAGGAGTCCGAGTACCCGACGCTGACTTCATTAGGCTTATTTCCCGTAGATCAGGGACAGCATTGGCTCTTACAAGTGC
TAATTTAAGTGGACAACCAAGCAGTGTCTGTGTTCATGATTTTGAAAACCTATGGCAACACTGTGCTTATGTCTACGATGGTGGCATTCTTCCTGCTGGACGAGCAGGTT
CTACGATTATCGACCTCACCAAGCGAGGGACGTTTAAGATAATCAGAGCTGGAAGTGCCAAGGAGCAGACTGTTGCAACACTTGAAAGGTATTCACTGTTAGAAGAAGCA
GATAGTGCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
TAGGTGCTCCGAGTTATGGATTTGTTTCGTTCTTGCATCACAATAGAGGATCGAGGTTGAATTTTCCTAAAACGGTATGGAGTTTGGAAAAATGTAGTATGCGCGTGGAG
AACAGTTTGCAAGCTCTTCGCCCTGCCTCTGAAGCTTTTGCTCAAGAAGCTATTGAAGCTCTTAAGGCTGGGAAGGTTATTGCAGTCCCCACTGATACTCTTTACGGACT
CGCTTGTGATGCTTGTTCTTCTGAAGCAGTCAATAGAATTTACGAAATTAAAGGACGTAAACTTACGAGCCCTCTCGCCATTTGTGTTGGCGATGTCTCTGACATAACTC
GTTTTGCTGTAGCAGACCATTTGCCTCATGGTTTGCTCGATTCTCTCCTTCCAGGACCGGTGACCGTTGTACTAAAAAGAGGCGAGTCGAGTATTCTTGAGAAGTCTCTG
AACCCTGGATTGGAGAGTATAGGAGTCCGAGTACCCGACGCTGACTTCATTAGGCTTATTTCCCGTAGATCAGGGACAGCATTGGCTCTTACAAGTGCTAATTTAAGTGG
ACAACCAAGCAGTGTCTGTGTTCATGATTTTGAAAACCTATGGCAACACTGTGCTTATGTCTACGATGGTGGCATTCTTCCTGCTGGACGAGCAGGTTCTACGATTATCG
ACCTCACCAAGCGAGGGACGTTTAAGATAATCAGAGCTGGAAGTGCCAAGGAGCAGACTGTTGCAACACTTGAAAGGTATTCACTGTTAGAAGAAGCAGATAGTGCTGCT
TGAGTATCAGAATCTTCTCCACTTCCCAAACCGTATCTGTTAGTCACTATAGATAGAGATTGCGATGAATTTTTTTAGGCCGAGTGAAAGTAGATCAATTATTATGGTTT
AAACTGATATGAACCACGACCAAGGAATTTTCATATGTCAAGGTCCAATTACAAGGACGAGAATCAAAAAGCTACAACAAACTTTATATACTTATATTCAAGCTATGGTG
AGCTCATCGTAAGAAATTCTAGAAGACGTTGTAGATCTCTCTTATATGTTGTGCAAAGTTGAGCTTCAAGAAAAAGATGAATTAAATGCATTTTAAGTTGCATTTAATGA
ACATGAGCTCAGCTAAATTTATAGCATATTTTATTTATTGCACTTATAATTTGACTATTTGTTTGTCATATTTAAACTAGTTTTAAATAT
Protein sequenceShow/hide protein sequence
MRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSIL
EKSLNPGLESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEA
DSAA