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Carg12334 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12334
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr01:3001888..3002253
RNA-Seq ExpressionCarg12334
SyntenyCarg12334
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036891.1 hypothetical protein SDJN02_00511, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-54100Show/hide
Query:  MASTAAPTQSRHSLSVITSKPHAVASIGRQINLASSLFSLPSNPFSSATRRTNPSRSSHAFSSINFFFRNLSFLIHVSFTLVGVIEIRVSLLQSRFSLLV
        MASTAAPTQSRHSLSVITSKPHAVASIGRQINLASSLFSLPSNPFSSATRRTNPSRSSHAFSSINFFFRNLSFLIHVSFTLVGVIEIRVSLLQSRFSLLV
Subjt:  MASTAAPTQSRHSLSVITSKPHAVASIGRQINLASSLFSLPSNPFSSATRRTNPSRSSHAFSSINFFFRNLSFLIHVSFTLVGVIEIRVSLLQSRFSLLV

Query:  CLCLLCDQNVLGVDASELCLS
        CLCLLCDQNVLGVDASELCLS
Subjt:  CLCLLCDQNVLGVDASELCLS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCACTGCGGCACCAACCCAAAGTCGCCACTCTTTGTCGGTCATCACGTCCAAGCCCCACGCTGTTGCCTCCATCGGGCGCCAAATCAACCTCGCCTCTTCTCT
CTTCTCCCTTCCTTCAAACCCTTTCTCTTCAGCTACACGCCGAACCAACCCCTCTCGATCTTCTCATGCATTCTCTTCCATCAATTTCTTCTTCCGCAACCTCAGTTTTC
TCATTCATGTTTCTTTCACGCTGGTCGGAGTGATCGAGATTAGGGTTTCGCTTCTGCAATCTCGCTTCTCTCTTCTCGTATGTTTGTGTTTGCTGTGTGATCAGAATGTC
TTGGGCGTTGACGCCTCGGAGCTCTGCTTATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCACTGCGGCACCAACCCAAAGTCGCCACTCTTTGTCGGTCATCACGTCCAAGCCCCACGCTGTTGCCTCCATCGGGCGCCAAATCAACCTCGCCTCTTCTCT
CTTCTCCCTTCCTTCAAACCCTTTCTCTTCAGCTACACGCCGAACCAACCCCTCTCGATCTTCTCATGCATTCTCTTCCATCAATTTCTTCTTCCGCAACCTCAGTTTTC
TCATTCATGTTTCTTTCACGCTGGTCGGAGTGATCGAGATTAGGGTTTCGCTTCTGCAATCTCGCTTCTCTCTTCTCGTATGTTTGTGTTTGCTGTGTGATCAGAATGTC
TTGGGCGTTGACGCCTCGGAGCTCTGCTTATCTTAG
Protein sequenceShow/hide protein sequence
MASTAAPTQSRHSLSVITSKPHAVASIGRQINLASSLFSLPSNPFSSATRRTNPSRSSHAFSSINFFFRNLSFLIHVSFTLVGVIEIRVSLLQSRFSLLVCLCLLCDQNV
LGVDASELCLS