; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12339 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12339
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger protein ZAT12-like isoform X1
Genome locationCarg_Chr01:3024894..3025301
RNA-Seq ExpressionCarg12339
SyntenyCarg12339
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607211.1 Zinc finger protein ZAT12, partial [Cucurbita argyrosperma subsp. sororia]2.5e-6599.2Show/hide
Query:  MEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCG
        MEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT AAAAVLKKSDGCG
Subjt:  MEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCG

Query:  KRVFELDLNLPPLENNLNLKLQLSL
        KRVFELDLNLPPLENNLNLKLQLSL
Subjt:  KRVFELDLNLPPLENNLNLKLQLSL

KAG7036896.1 Zinc finger protein ZAT12, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-73100Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA
        MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA

Query:  AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
Subjt:  AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

XP_022949001.1 zinc finger protein ZAT12-like isoform X1 [Cucurbita moschata]4.0e-7199.26Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA
        MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT AAA
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA

Query:  AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
Subjt:  AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

XP_022997819.1 zinc finger protein ZAT12-like isoform X1 [Cucurbita maxima]2.0e-7097.78Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA
        MVDCLMLLSKMEEPRRKNGFAPTPAADSDK+FVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHR+T AAA
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA

Query:  AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
Subjt:  AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

XP_023524575.1 zinc finger protein ZAT12-like [Cucurbita pepo subsp. pepo]1.8e-7198.5Show/hide
Query:  DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAV
        DCLMLLSKMEEPRRKNGF+PTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAV
Subjt:  DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAV

Query:  LKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        LKKSDGCGKR+FELDLNLPPLENNLNLKLQLSL
Subjt:  LKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

TrEMBL top hitse value%identityAlignment
A0A1S3C722 zinc finger protein ZAT12-like6.3e-4675.19Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNF-NANGPPTKSKAHECPICGLDFPIGQALGGHMRRHR-NTAA
        MVDC   LSK+EEP RKN     PAADS K+FVCKTCNREFSSFQALGGHR SH KPNF +ANGPPTK KAH+CPICGL FP+GQALGGHMRRHR +T  
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNF-NANGPPTKSKAHECPICGLDFPIGQALGGHMRRHR-NTAA

Query:  AAAVLKKSDGCGKRVFELDLNLPPLENNLNLKL
        AAAVL+KSDG  KR F LDLNL P+ENNL L+L
Subjt:  AAAVLKKSDGCGKRVFELDLNLPPLENNLNLKL

A0A6J1GAS1 zinc finger protein ZAT12-like isoform X12.0e-7199.26Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA
        MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT AAA
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA

Query:  AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
Subjt:  AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

A0A6J1GAT3 zinc finger protein ZAT12-like isoform X22.9e-4398.89Show/hide
Query:  ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT AAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
Subjt:  ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

A0A6J1KAY6 zinc finger protein ZAT12-like isoform X21.1e-4297.78Show/hide
Query:  ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHR+T AAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
Subjt:  ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

A0A6J1KCM4 zinc finger protein ZAT12-like isoform X19.7e-7197.78Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA
        MVDCLMLLSKMEEPRRKNGFAPTPAADSDK+FVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHR+T AAA
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA

Query:  AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
Subjt:  AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

SwissProt top hitse value%identityAlignment
Q42410 Zinc finger protein ZAT121.7e-2748Show/hide
Query:  DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANG----PPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAA
        +CLMLLS++ +     G       D  ++F CKTC ++F SFQALGGHR SH KPN +A         K+ +H CPICG++FP+GQALGGHMRRHRN + 
Subjt:  DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANG----PPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAA

Query:  AA---------------AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL
        AA                 LKKS   GKRV  LDL+L  + +NLNLKL+L
Subjt:  AA---------------AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL

Q42453 Zinc finger protein ZAT72.5e-2343.33Show/hide
Query:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------PNFNANGPPTKSK-AHECPICGLDFPIGQALGGHMRRHRNT
        CLMLLS++       G         +++F CKTC +EFSSFQALGGHR SH K      P+   +    K+K +H CPICG+ FP+GQALGGHMRRHRN 
Subjt:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------PNFNANGPPTKSK-AHECPICGLDFPIGQALGGHMRRHRNT

Query:  AAAAAVLKKS-------------DGCGKRVFELDLNLPPLENNLNLKLQL
          + +++ +S                GKRV  LDL+L  +E+ +N KL+L
Subjt:  AAAAAVLKKS-------------DGCGKRVFELDLNLPPLENNLNLKLQL

Q9LFG0 Zinc finger protein ZAT181.1e-1840.56Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPA-ADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSK-----AHECPICGLDFPIGQALGGHMRRHR
        +V+ LM+LS+    ++ +    T +  + +  F CKTCNR+F SFQALGGHR SH KP    +    K +      H+C IC   F  GQALGGHMR+HR
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPA-ADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSK-----AHECPICGLDFPIGQALGGHMRRHR

Query:  NTAAAAAVLKKSDGCGKRVFE--------LDLNLPPLENNLNL
         +      +  S    + VF         LDLNL PLEN+L L
Subjt:  NTAAAAAVLKKSDGCGKRVFE--------LDLNLPPLENNLNL

Q9LX85 Zinc finger protein ZAT83.0e-2142.48Show/hide
Query:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------PNFNANGPPTKSK---AHECPICGLDFPIGQALGGHMRRHR
        CLMLLS++ E                ++F CKTC +EFSSFQALGGHR SH K      P+   +    K+K   +H CPICG++FP+GQALGGHMRRHR
Subjt:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------PNFNANGPPTKSK---AHECPICGLDFPIGQALGGHMRRHR

Query:  NTAAAAAVL--------------KKSDGCGKRVFELDLNLPPLENNLNLKLQL
        +  A+   L               K    GKRV  LDL+   +E+ +N KL+L
Subjt:  NTAAAAAVL--------------KKSDGCGKRVFELDLNLPPLENNLNLKLQL

Q9SLD4 Zinc finger protein ZAT111.4e-2142.66Show/hide
Query:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTK--------SKAHECPICGLDFPIGQALGGHMRRHRN
        CLM+L++    ++      T +  S++ F CKTCN+ FSSFQALGGHR SH KP         K        +  H+C IC   F  GQALGGHMRRHR+
Subjt:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTK--------SKAHECPICGLDFPIGQALGGHMRRHRN

Query:  TAA-----------AAAVLKKSDGCGKRVFELDLNLPPLENNL
        +             +  VLK+  G  KR+  LDLNL PLEN+L
Subjt:  TAA-----------AAAVLKKSDGCGKRVFELDLNLPPLENNL

Arabidopsis top hitse value%identityAlignment
AT2G28710.1 C2H2-type zinc finger family protein5.9e-2848Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK-PNFNANGPPT----KSKAHECPICGLDFPIGQALGGHMRRHRN
        M +CL+LLSK  +   K+           ++F CKTCN+EF SFQALGGHR SH +      + PP+    K   HECPICG +F +GQALGGHMR+HR 
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK-PNFNANGPPT----KSKAHECPICGLDFPIGQALGGHMRRHRN

Query:  -----------TAAAAAVLKKS-DGCGKRVFELDLNLPPLENNLNLKLQL
                    A A   +KKS  G GKRV  LDLNL PLEN  +LKL+L
Subjt:  -----------TAAAAAVLKKS-DGCGKRVFELDLNLPPLENNLNLKLQL

AT2G37430.1 C2H2 and C2HC zinc fingers superfamily protein9.7e-2342.66Show/hide
Query:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTK--------SKAHECPICGLDFPIGQALGGHMRRHRN
        CLM+L++    ++      T +  S++ F CKTCN+ FSSFQALGGHR SH KP         K        +  H+C IC   F  GQALGGHMRRHR+
Subjt:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTK--------SKAHECPICGLDFPIGQALGGHMRRHRN

Query:  TAA-----------AAAVLKKSDGCGKRVFELDLNLPPLENNL
        +             +  VLK+  G  KR+  LDLNL PLEN+L
Subjt:  TAA-----------AAAVLKKSDGCGKRVFELDLNLPPLENNL

AT3G46070.1 C2H2-type zinc finger family protein5.7e-2342.5Show/hide
Query:  CLMLLSKM-EEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK----PNFNANGPP-------TKSKAHECPICGLDFPIGQALGGHMR
        CLMLLS + E   RK            ++F CKTC R+F SFQALGGHR SH+K     + +  G P       T + AH CPICGL+FP+GQALGGHMR
Subjt:  CLMLLSKM-EEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK----PNFNANGPP-------TKSKAHECPICGLDFPIGQALGGHMR

Query:  RHRN------------------TAAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL
        +HRN                         LKKS   GKRV  LD +L  +E+ +N +L+L
Subjt:  RHRN------------------TAAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL

AT3G46090.1 C2H2 and C2HC zinc fingers superfamily protein1.8e-2443.33Show/hide
Query:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------PNFNANGPPTKSK-AHECPICGLDFPIGQALGGHMRRHRNT
        CLMLLS++       G         +++F CKTC +EFSSFQALGGHR SH K      P+   +    K+K +H CPICG+ FP+GQALGGHMRRHRN 
Subjt:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------PNFNANGPPTKSK-AHECPICGLDFPIGQALGGHMRRHRNT

Query:  AAAAAVLKKS-------------DGCGKRVFELDLNLPPLENNLNLKLQL
          + +++ +S                GKRV  LDL+L  +E+ +N KL+L
Subjt:  AAAAAVLKKS-------------DGCGKRVFELDLNLPPLENNLNLKLQL

AT5G59820.1 C2H2-type zinc finger family protein1.2e-2848Show/hide
Query:  DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANG----PPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAA
        +CLMLLS++ +     G       D  ++F CKTC ++F SFQALGGHR SH KPN +A         K+ +H CPICG++FP+GQALGGHMRRHRN + 
Subjt:  DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANG----PPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAA

Query:  AA---------------AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL
        AA                 LKKS   GKRV  LDL+L  + +NLNLKL+L
Subjt:  AA---------------AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGATTGCTTAATGTTGCTATCCAAAATGGAGGAGCCACGGCGGAAGAACGGTTTCGCTCCGACGCCGGCGGCGGATTCCGACAAGATTTTTGTCTGTAAAACGTG
TAATAGAGAATTCTCATCTTTCCAGGCTTTAGGAGGGCATAGAACCAGCCACACGAAGCCCAATTTCAACGCTAACGGCCCACCAACTAAGTCCAAGGCCCATGAATGCC
CAATTTGTGGGCTTGATTTTCCGATCGGACAAGCGTTAGGCGGTCACATGAGGCGCCACCGGAACACCGCCGCCGCCGCCGCCGTATTGAAGAAGTCCGATGGCTGTGGG
AAAAGGGTTTTTGAGTTGGATTTGAACTTGCCGCCATTAGAGAACAATTTGAATTTGAAGTTGCAACTGAGTTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGATTGCTTAATGTTGCTATCCAAAATGGAGGAGCCACGGCGGAAGAACGGTTTCGCTCCGACGCCGGCGGCGGATTCCGACAAGATTTTTGTCTGTAAAACGTG
TAATAGAGAATTCTCATCTTTCCAGGCTTTAGGAGGGCATAGAACCAGCCACACGAAGCCCAATTTCAACGCTAACGGCCCACCAACTAAGTCCAAGGCCCATGAATGCC
CAATTTGTGGGCTTGATTTTCCGATCGGACAAGCGTTAGGCGGTCACATGAGGCGCCACCGGAACACCGCCGCCGCCGCCGCCGTATTGAAGAAGTCCGATGGCTGTGGG
AAAAGGGTTTTTGAGTTGGATTTGAACTTGCCGCCATTAGAGAACAATTTGAATTTGAAGTTGCAACTGAGTTTATAG
Protein sequenceShow/hide protein sequence
MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCG
KRVFELDLNLPPLENNLNLKLQLSL