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Carg12352 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12352
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein unc-80 like
Genome locationCarg_Chr01:3094984..3095373
RNA-Seq ExpressionCarg12352
SyntenyCarg12352
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036909.1 hypothetical protein SDJN02_00529, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-65100Show/hide
Query:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF
        MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF
Subjt:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF

Query:  AVARAAAKQGSSGGALLSMFRRLVCCGGR
        AVARAAAKQGSSGGALLSMFRRLVCCGGR
Subjt:  AVARAAAKQGSSGGALLSMFRRLVCCGGR

XP_011648508.1 uncharacterized protein LOC105434501 [Cucumis sativus]7.9e-3266.41Show/hide
Query:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGA----RRQMYLRSYTFSREDAVAPKGTTQHCLGKL-RSFRKPEEIREGLRKR
        MASVCISECVDN C+V   RPT+VNLQR  EEE  S   ERRRPRPR A    RRQMYLRSYTFSRED V P+ TTQ+C GK+ R  RKP  IR G  +R
Subjt:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGA----RRQMYLRSYTFSREDAVAPKGTTQHCLGKL-RSFRKPEEIREGLRKR

Query:  RSRCFAVARAAAKQGSSGGALLSMFRRLVCC
        RSRC A+ +AAA Q SS GALL +FRRL+CC
Subjt:  RSRCFAVARAAAKQGSSGGALLSMFRRLVCC

XP_022949319.1 uncharacterized protein LOC111452708 [Cucurbita moschata]5.4e-6599.22Show/hide
Query:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF
        MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF
Subjt:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF

Query:  AVARAAAKQGSSGGALLSMFRRLVCCGGR
        AVAR AAKQGSSGGALLSMFRRLVCCGGR
Subjt:  AVARAAAKQGSSGGALLSMFRRLVCCGGR

XP_022997982.1 uncharacterized protein LOC111492773 [Cucurbita maxima]2.3e-6096.06Show/hide
Query:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF
        MASVCISECVDNVCVVPGGRPTHVNL+RCPEEENDSAE+ERRRPRPRGARRQMYLRSYTFSREDAVAP GTTQHCLGKLRSFRKPEEIR+GLRKRRSRCF
Subjt:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF

Query:  AVARAAAKQGSSGGALLSMFRR-LVCC
        AVARAAAKQGSSGGALLSMFRR LVCC
Subjt:  AVARAAAKQGSSGGALLSMFRR-LVCC

XP_023524571.1 uncharacterized protein LOC111788468 [Cucurbita pepo subsp. pepo]3.9e-6397.67Show/hide
Query:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF
        MASVCISECVDNVCVVPGGRPTHVNLQR PEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPE+IREGLRKRRSRCF
Subjt:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF

Query:  AVARAAAKQGSSGGALLSMFRRLVCCGGR
        AVARAAAKQ SSGGALLSMFRRLVCCGGR
Subjt:  AVARAAAKQGSSGGALLSMFRRLVCCGGR

TrEMBL top hitse value%identityAlignment
A0A0A0LXY3 Uncharacterized protein3.8e-3266.41Show/hide
Query:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGA----RRQMYLRSYTFSREDAVAPKGTTQHCLGKL-RSFRKPEEIREGLRKR
        MASVCISECVDN C+V   RPT+VNLQR  EEE  S   ERRRPRPR A    RRQMYLRSYTFSRED V P+ TTQ+C GK+ R  RKP  IR G  +R
Subjt:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGA----RRQMYLRSYTFSREDAVAPKGTTQHCLGKL-RSFRKPEEIREGLRKR

Query:  RSRCFAVARAAAKQGSSGGALLSMFRRLVCC
        RSRC A+ +AAA Q SS GALL +FRRL+CC
Subjt:  RSRCFAVARAAAKQGSSGGALLSMFRRLVCC

A0A5A7SXG3 Uncharacterized protein8.5e-3264.89Show/hide
Query:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGA----RRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFR-KPEEIREGLRKR
        MASVCISECVDN C+V   +PT+VNLQR  EEE  S   ERRRPRPR A    RRQMYLRSYTFSRED V P+ TTQ+C GK+R  R +P  IR    +R
Subjt:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGA----RRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFR-KPEEIREGLRKR

Query:  RSRCFAVARAAAKQGSSGGALLSMFRRLVCC
        RSRCFA+ +AAA Q SS GAL+ MFRRL+CC
Subjt:  RSRCFAVARAAAKQGSSGGALLSMFRRLVCC

A0A6J1GCH4 uncharacterized protein LOC1114527082.6e-6599.22Show/hide
Query:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF
        MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF
Subjt:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF

Query:  AVARAAAKQGSSGGALLSMFRRLVCCGGR
        AVAR AAKQGSSGGALLSMFRRLVCCGGR
Subjt:  AVARAAAKQGSSGGALLSMFRRLVCCGGR

A0A6J1I3Q2 uncharacterized protein LOC1114693895.0e-3263.85Show/hide
Query:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGA----RRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRR
        MASVCISEC+++ C++P GRPT+ +LQR PEEE+ S   E RRPR R A    RRQMYLRSYTFSRED    + T Q CLGKL+  R+P EIR G   RR
Subjt:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGA----RRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRR

Query:  SRCFAVARAAAKQGSSGGALLSMFRRLVCC
        SRCFA+ RAAA + SS GALLSMFRRL+CC
Subjt:  SRCFAVARAAAKQGSSGGALLSMFRRLVCC

A0A6J1K6K9 uncharacterized protein LOC1114927731.1e-6096.06Show/hide
Query:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF
        MASVCISECVDNVCVVPGGRPTHVNL+RCPEEENDSAE+ERRRPRPRGARRQMYLRSYTFSREDAVAP GTTQHCLGKLRSFRKPEEIR+GLRKRRSRCF
Subjt:  MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCF

Query:  AVARAAAKQGSSGGALLSMFRR-LVCC
        AVARAAAKQGSSGGALLSMFRR LVCC
Subjt:  AVARAAAKQGSSGGALLSMFRR-LVCC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G02640.1 unknown protein8.4e-0835.1Show/hide
Query:  MASVCISECVDNV----CVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGAR-------RQMYLRSYTFSRED-----AVAPKGTTQHCLGKLR----
        M SVCIS C+++       V   R ++VNL + PE + +     RR      AR       RQMYLRSYTFSRED          GT   CLG+++    
Subjt:  MASVCISECVDNV----CVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGAR-------RQMYLRSYTFSRED-----AVAPKGTTQHCLGKLR----

Query:  SFRKPEE-----IREGLRKRRSRCFAVARAAAKQGSSGGALLSMFRRLVCC
        S RK +E     I E  + RR           KQ  +   +L +FRRL+ C
Subjt:  SFRKPEE-----IREGLRKRRSRCFAVARAAAKQGSSGGALLSMFRRLVCC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCGTCTGCATATCAGAATGCGTCGACAACGTCTGCGTCGTCCCGGGCGGCCGCCCGACCCACGTGAACCTGCAGCGGTGTCCGGAGGAGGAGAACGACTCTGC
AGAGAGAGAACGCCGCCGCCCACGGCCGAGAGGGGCTCGCCGACAAATGTATCTGAGGAGCTACACCTTTTCTAGAGAGGATGCCGTCGCCCCTAAGGGTACAACTCAGC
ACTGCCTTGGGAAGCTCAGGTCATTTCGGAAGCCGGAGGAGATCCGCGAAGGGCTGAGGAAGAGGAGGAGCCGCTGTTTCGCCGTTGCTAGGGCCGCCGCCAAGCAGGGT
TCTTCCGGTGGTGCGTTGCTATCCATGTTTCGACGGCTGGTTTGTTGTGGCGGCCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCGTCTGCATATCAGAATGCGTCGACAACGTCTGCGTCGTCCCGGGCGGCCGCCCGACCCACGTGAACCTGCAGCGGTGTCCGGAGGAGGAGAACGACTCTGC
AGAGAGAGAACGCCGCCGCCCACGGCCGAGAGGGGCTCGCCGACAAATGTATCTGAGGAGCTACACCTTTTCTAGAGAGGATGCCGTCGCCCCTAAGGGTACAACTCAGC
ACTGCCTTGGGAAGCTCAGGTCATTTCGGAAGCCGGAGGAGATCCGCGAAGGGCTGAGGAAGAGGAGGAGCCGCTGTTTCGCCGTTGCTAGGGCCGCCGCCAAGCAGGGT
TCTTCCGGTGGTGCGTTGCTATCCATGTTTCGACGGCTGGTTTGTTGTGGCGGCCGGTAA
Protein sequenceShow/hide protein sequence
MASVCISECVDNVCVVPGGRPTHVNLQRCPEEENDSAERERRRPRPRGARRQMYLRSYTFSREDAVAPKGTTQHCLGKLRSFRKPEEIREGLRKRRSRCFAVARAAAKQG
SSGGALLSMFRRLVCCGGR