CuGenDBv2

Gene ID	Carg12365
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cyclin-dependent protein kinase inhibitor SMR3-like
Genome location	Carg_Chr01:3218750..3219174
RNA-Seq Expression	Carg12365
Synteny	Carg12365
Gene Ontology terms	GO:0032875 - regulation of DNA endoreduplication (biological process) GO:0045839 - negative regulation of mitotic nuclear division (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR040389 - Cyclin-dependent protein kinase inhibitor SMR

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8039043.1 hypothetical protein FH972_011491 [Carpinus fangiana]

3.0e-17

42.76

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Query:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDH--------------------------ESKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPK
        M + +S + LSE D++AMEF FL+       +DH                              E + V+DD++GFKTPTSL+HKIPA L+CP APRKPK
Subjt:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDH--------------------------ESKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPK

Query:  SRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGLG-GKMKRLFK
        + P+ KRKA  RQR+ LDLS++I++LFP   L  L  GK+K++ K
Subjt:  SRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGLG-GKMKRLFK

KAG6607237.1 hypothetical protein SDJN03_00579, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-52

99.1

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Query:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHESKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSL
        MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHESKSV+DDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSL
Subjt:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHESKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSL

Query:  FPADFLVGLGG
        FPADFLVGLGG
Subjt:  FPADFLVGLGG

KAG7036922.1 hypothetical protein SDJN02_00542, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.6e-58

100

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Query:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHESKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSL
        MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHESKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSL
Subjt:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHESKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSL

Query:  FPADFLVGLGGKMKRLFKLIL
        FPADFLVGLGGKMKRLFKLIL
Subjt:  FPADFLVGLGGKMKRLFKLIL

XP_011658114.1 cyclin-dependent protein kinase inhibitor SMR3 [Cucumis sativus]

6.9e-38

71.77

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Query:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHE--------SKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLD
        M LFNS+ILLSENDV++MEFTFLL Y+ SK  D + D +        S SV+DDDNGFKTPTSLEHKIP SL+CPMAPRKPK R + KRKAVER RL LD
Subjt:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHE--------SKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLD

Query:  LSSEIQSLFPADFLVGLGGKMKRL
        LSSEIQSLFPA+FLVGLGGK+KR+
Subjt:  LSSEIQSLFPADFLVGLGGKMKRL

XP_016902107.1 PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo]

1.3e-36

70.25

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Query:  FNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHESKS--------VQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSS
        FNS+ILLSENDV++MEFTFLL Y+ SK  D + D + ++        VQDDDNGFKTPTSLEHKIP S++CPMAPRKPK R + KRKAVER RL LDLSS
Subjt:  FNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHESKS--------VQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSS

Query:  EIQSLFPADFLVGLGGKMKRL
        EIQSLFPA+FLVGLGGK+KR+
Subjt:  EIQSLFPADFLVGLGGKMKRL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY05 Uncharacterized protein

3.3e-38

71.77

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Query:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHE--------SKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLD
        M LFNS+ILLSENDV++MEFTFLL Y+ SK  D + D +        S SV+DDDNGFKTPTSLEHKIP SL+CPMAPRKPK R + KRKAVER RL LD
Subjt:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHE--------SKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLD

Query:  LSSEIQSLFPADFLVGLGGKMKRL
        LSSEIQSLFPA+FLVGLGGK+KR+
Subjt:  LSSEIQSLFPADFLVGLGGKMKRL

A0A1S4E1K5 cyclin-dependent protein kinase inhibitor SMR3-like

6.3e-37

70.25

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Query:  FNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHESKS--------VQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSS
        FNS+ILLSENDV++MEFTFLL Y+ SK  D + D + ++        VQDDDNGFKTPTSLEHKIP S++CPMAPRKPK R + KRKAVER RL LDLSS
Subjt:  FNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHESKS--------VQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSS

Query:  EIQSLFPADFLVGLGGKMKRL
        EIQSLFPA+FLVGLGGK+KR+
Subjt:  EIQSLFPADFLVGLGGKMKRL

A0A5A7VIY0 Cyclin-dependent protein kinase inhibitor SMR3-like

6.3e-37

70.25

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Query:  FNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHESKS--------VQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSS
        FNS+ILLSENDV++MEFTFLL Y+ SK  D + D + ++        VQDDDNGFKTPTSLEHKIP S++CPMAPRKPK R + KRKAVER RL LDLSS
Subjt:  FNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHESKS--------VQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSS

Query:  EIQSLFPADFLVGLGGKMKRL
        EIQSLFPA+FLVGLGGK+KR+
Subjt:  EIQSLFPADFLVGLGGKMKRL

A0A660KRH4 Uncharacterized protein

1.5e-17

42.76

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Query:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDH--------------------------ESKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPK
        M + +S + LSE D++AMEF FL+       +DH                              E + V+DD++GFKTPTSL+HKIPA L+CP APRKPK
Subjt:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDH--------------------------ESKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPK

Query:  SRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGLG-GKMKRLFK
        + P+ KRKA  RQR+ LDLS++I++LFP   L  L  GK+K++ K
Subjt:  SRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGLG-GKMKRLFK

A0A7N2KPB5 Uncharacterized protein

1.4e-15

62.82

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Query:  ESKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGLGGKMKRL
        E + V+DDD+GF+TPTSL+HKIP SL+CP APRKPK  P  KRKA  R+R+ LDLS+EI SLFP   LV L  K+KR+
Subjt:  ESKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGLGGKMKRL

SwissProt top hits

e value

%identity

Alignment

Q9LTJ2 Cyclin-dependent protein kinase inhibitor SMR14

1.4e-04

35.35

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Query:  HQDHDLDHESKSVQDDDNGFKTPTSLEH----KIPASLR-------C-PMAPRKPKSRPMMKRKA--VERQRLFLDLSSEIQSLFPADFLVGLGGKMKR
        HQ    D E +++QD   G +     +     KIP + R       C P  PRKPK+ P MKR+   V+R  +FLD++ E++S+FP   L   G K+K+
Subjt:  HQDHDLDHESKSVQDDDNGFKTPTSLEH----KIPASLR-------C-PMAPRKPKSRPMMKRKA--VERQRLFLDLSSEIQSLFPADFLVGLGGKMKR

Arabidopsis top hits

e value

%identity

Alignment

AT5G02420.1 unknown protein

8.2e-05

44.59

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Query:  DLDHESKSVQDDDNGFKTPTSLEHKIP--ASLRCPMAPRKPKSRPM--MKRKAVE---RQRLFLDLSSEIQSLF
        D DHE  +V +++ G KTPTS +HKIP      CP APRKPK       KRK        R+ +DLS EI+  F
Subjt:  DLDHESKSVQDDDNGFKTPTSLEHKIP--ASLRCPMAPRKPKSRPM--MKRKAVE---RQRLFLDLSSEIQSLF

AT5G59360.1 unknown protein

9.7e-06

35.35

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Query:  HQDHDLDHESKSVQDDDNGFKTPTSLEH----KIPASLR-------C-PMAPRKPKSRPMMKRKA--VERQRLFLDLSSEIQSLFPADFLVGLGGKMKR
        HQ    D E +++QD   G +     +     KIP + R       C P  PRKPK+ P MKR+   V+R  +FLD++ E++S+FP   L   G K+K+
Subjt:  HQDHDLDHESKSVQDDDNGFKTPTSLEH----KIPASLR-------C-PMAPRKPKSRPMMKRKA--VERQRLFLDLSSEIQSLFPADFLVGLGGKMKR

Sequences

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CDS sequence

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ATGGCCCTCTTCAATTCCACTATCTTACTCTCTGAAAATGATGTAAGCGCCATGGAATTCACATTTCTTCTCACATACTTGACTTCCAAACATCAAGACCACGACCTCGA
CCACGAAAGCAAATCTGTTCAAGACGATGACAATGGGTTCAAAACTCCGACTTCTTTGGAGCATAAAATCCCGGCAAGTCTCCGGTGTCCGATGGCGCCGAGGAAACCGA
AATCTCGACCGATGATGAAGCGGAAGGCAGTTGAGCGACAGCGTTTGTTTCTGGATCTGTCGAGCGAAATTCAATCTTTGTTTCCAGCTGATTTTCTTGTAGGGCTTGGT
GGTAAGATGAAGAGGCTCTTCAAATTGATCTTGTAG

mRNA sequence

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Protein sequence

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MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHESKSVQDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGLG
GKMKRLFKLIL

Carg12365 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome