CuGenDBv2

Gene ID	Carg12373
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	methyl-CpG-binding domain-containing protein 5-like
Genome location	Carg_Chr01:3247727..3250083
RNA-Seq Expression	Carg12373
Synteny	Carg12373
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR001739 - Methyl-CpG DNA binding IPR016177 - DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6607246.1 Methyl-CpG-binding domain-containing protein 6, partial [Cucurbita argyrosperma subsp. sororia]

3.4e-143

99.23

Show/hide

Query:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD
        MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLP DPLNPKKLPPDSPTPGNGD
Subjt:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD

Query:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS
        SSAPKKVSASRGTDASPKSALSERPNWLP GWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS
Subjt:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS

Query:  SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
        SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
Subjt:  SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV

KAG7036930.1 Methyl-CpG-binding domain-containing protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.8e-145

100

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Query:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD
        MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD
Subjt:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD

Query:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS
        SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS
Subjt:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS

Query:  SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
        SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
Subjt:  SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV

XP_022948611.1 methyl-CpG-binding domain-containing protein 5-like isoform X2 [Cucurbita moschata]

2.6e-143

98.85

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Query:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD
        MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLP DPLNPKKLPPDSPTPGNGD
Subjt:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD

Query:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS
        SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDP SGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS
Subjt:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS

Query:  SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
        SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSK+
Subjt:  SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV

XP_022998336.1 methyl-CpG-binding domain-containing protein 5-like isoform X2 [Cucurbita maxima]

3.8e-142

98.46

Show/hide

Query:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD
        MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHR KPDTSATLRSPLP DPLNPKKL PDSPTPGNGD
Subjt:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD

Query:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS
        SSAPKKVSASRGTDASPKSALS+RPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS
Subjt:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS

Query:  SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
        SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
Subjt:  SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV

XP_023523162.1 methyl-CpG-binding domain-containing protein 5-like [Cucurbita pepo subsp. pepo]

2.9e-142

98.46

Show/hide

Query:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD
        MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDG HR KPDTSATLRSPLP DPLNPKKLPPDSPTPGNGD
Subjt:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD

Query:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS
        SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS
Subjt:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS

Query:  SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
        SNAKSAPLNFDFFNVPEKVEWVLTDPSQE WTPFINNEKVPESTKREWVAAFQLLGRSKV
Subjt:  SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1G9P7 methyl-CpG-binding domain-containing protein 5-like isoform X2

1.3e-143

98.85

Show/hide

Query:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD
        MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLP DPLNPKKLPPDSPTPGNGD
Subjt:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD

Query:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS
        SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDP SGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS
Subjt:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS

Query:  SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
        SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSK+
Subjt:  SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV

A0A6J1GAC7 methyl-CpG-binding domain-containing protein 5-like isoform X1

4.1e-142

98.09

Show/hide

Query:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD
        MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLP DPLNPKKLPPDSPTPGNGD
Subjt:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD

Query:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGN--SADGSEEPKSKK
        SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDP SGRRFRSKIEVLYFLETGTLRKRKKSLDGN  SADGSEEPKSKK
Subjt:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGN--SADGSEEPKSKK

Query:  SSSNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
        SSSNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSK+
Subjt:  SSSNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV

A0A6J1HLU8 methyl-CpG-binding domain-containing protein 5-like

1.3e-108

79.01

Show/hide

Query:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD
        MSA GTS  DPDWPR+  TR +LP  +H PPDPLL +GSFIDSS ARCGTLPSSP+++RDLD NHR K +TS+TLRSP   DPLN           GNGD
Subjt:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD

Query:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGN--SADGSEEPKSKK
        S A KK+S SRGTDASPKSA SE+PNWLPPGW++EDRVR SGATAGTVDKYYFDP SGRRFRSKIEVLYFLETGTLRKRKKSLDGN  SADG EEPK+KK
Subjt:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGN--SADGSEEPKSKK

Query:  SSSNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
        SS+NAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVP+STKREWVAAF+LL RSKV
Subjt:  SSSNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV

A0A6J1K9Z4 methyl-CpG-binding domain-containing protein 5-like isoform X2

1.8e-142

98.46

Show/hide

Query:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD
        MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHR KPDTSATLRSPLP DPLNPKKL PDSPTPGNGD
Subjt:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD

Query:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS
        SSAPKKVSASRGTDASPKSALS+RPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS
Subjt:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSS

Query:  SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
        SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
Subjt:  SNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV

A0A6J1KC76 methyl-CpG-binding domain-containing protein 5-like isoform X1

5.9e-141

97.71

Show/hide

Query:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD
        MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHR KPDTSATLRSPLP DPLNPKKL PDSPTPGNGD
Subjt:  MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGD

Query:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGN--SADGSEEPKSKK
        SSAPKKVSASRGTDASPKSALS+RPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGN  SADGSEEPKSKK
Subjt:  SSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGN--SADGSEEPKSKK

Query:  SSSNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
        SSSNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV
Subjt:  SSSNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV

SwissProt top hits

e value

%identity

Alignment

Q9LTJ1 Methyl-CpG-binding domain-containing protein 6

1.1e-30

36.93

Show/hide

Query:  FPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGDSSAPKKVSASRGTD-----ASPKSALSE
        FPPDPLL+SG+FI  S+A  GTL SS                                 K  P     G   S    ++  + GTD        KS    
Subjt:  FPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGDSSAPKKVSASRGTD-----ASPKSALSE

Query:  RP--NWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGN-------SADGSEEPKSKKSSSNAKSAPLNFDFFN
         P  NWLPPGW VED++R SGATAG+VDKYY++PN+GR+FRS+ EVLY+LE GT ++  K  +            GS       +       PL+FDF N
Subjt:  RP--NWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGN-------SADGSEEPKSKKSSSNAKSAPLNFDFFN

Query:  VPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLL
         P+KV W + +  +E W P I + KV +S +R+W  AF  +
Subjt:  VPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLL

Q9SNC0 Methyl-CpG-binding domain-containing protein 5

3.4e-29

43.2

Show/hide

Query:  GNGDSSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSE----
        G   +  P +  A+     S K A     NWLPP W  E RVR SG  AGTVDK+Y++P +GR+FRSK EVLY+LE GT +K+      N    SE    
Subjt:  GNGDSSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSE----

Query:  ------EPKSKKSSSNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLL
              + KS K  +     PLNFDF NVPEKV W   + S+EAW PFI + K+ ES  ++W   F L+
Subjt:  ------EPKSKKSSSNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLL

Arabidopsis top hits

e value

%identity

Alignment

AT3G46580.1 methyl-CPG-binding domain protein 5

2.4e-30

43.2

Show/hide

Query:  GNGDSSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSE----
        G   +  P +  A+     S K A     NWLPP W  E RVR SG  AGTVDK+Y++P +GR+FRSK EVLY+LE GT +K+      N    SE    
Subjt:  GNGDSSAPKKVSASRGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSE----

Query:  ------EPKSKKSSSNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLL
              + KS K  +     PLNFDF NVPEKV W   + S+EAW PFI + K+ ES  ++W   F L+
Subjt:  ------EPKSKKSSSNAKSAPLNFDFFNVPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLL

AT5G59380.1 methyl-CPG-binding domain 6

7.6e-32

36.93

Show/hide

Query:  FPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGDSSAPKKVSASRGTD-----ASPKSALSE
        FPPDPLL+SG+FI  S+A  GTL SS                                 K  P     G   S    ++  + GTD        KS    
Subjt:  FPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGDSSAPKKVSASRGTD-----ASPKSALSE

Query:  RP--NWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGN-------SADGSEEPKSKKSSSNAKSAPLNFDFFN
         P  NWLPPGW VED++R SGATAG+VDKYY++PN+GR+FRS+ EVLY+LE GT ++  K  +            GS       +       PL+FDF N
Subjt:  RP--NWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGN-------SADGSEEPKSKKSSSNAKSAPLNFDFFN

Query:  VPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLL
         P+KV W + +  +E W P I + KV +S +R+W  AF  +
Subjt:  VPEKVEWVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTGCTTCTGGAACTTCGTTTCCGGACCCCGACTGGCCCCGTCAAGGTTCCACCCGACCCGACTTACCTTCTCCCCACCACTTCCCTCCCGACCCTCTCCTCTCCTC
TGGCTCCTTCATCGACTCCTCCACCGCTCGATGCGGAACCCTACCTTCTTCTCCCGACTACGCCCGAGATCTTGACGGGAATCATCGCAACAAGCCTGACACCTCCGCCA
CTCTCCGATCTCCATTGCCTCCTGACCCTCTCAACCCTAAGAAGCTTCCTCCCGATTCTCCTACTCCAGGAAATGGAGATTCTTCGGCACCCAAGAAGGTGTCCGCCTCC
AGAGGAACCGACGCCTCCCCCAAATCCGCCTTATCGGAAAGGCCTAATTGGCTCCCACCTGGCTGGGTGGTGGAAGATAGAGTTCGCGCTTCCGGTGCTACAGCTGGAAC
GGTTGATAAGTACTACTTTGACCCAAACTCAGGTCGTCGCTTCCGGTCTAAGATTGAAGTTCTTTACTTTCTCGAAACAGGAACGTTAAGGAAACGGAAGAAATCTTTAG
ACGGCAACTCTGCTGATGGCTCCGAAGAACCAAAGAGCAAGAAATCTTCAAGCAATGCTAAATCTGCTCCTTTAAACTTCGATTTCTTCAATGTGCCTGAAAAGGTCGAG
TGGGTTCTCACAGACCCTTCTCAGGAGGCCTGGACGCCGTTTATTAACAACGAGAAAGTACCTGAATCGACTAAACGCGAATGGGTAGCAGCCTTTCAACTCCTCGGGCG
ATCGAAAGTCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSASGTSFPDPDWPRQGSTRPDLPSPHHFPPDPLLSSGSFIDSSTARCGTLPSSPDYARDLDGNHRNKPDTSATLRSPLPPDPLNPKKLPPDSPTPGNGDSSAPKKVSAS
RGTDASPKSALSERPNWLPPGWVVEDRVRASGATAGTVDKYYFDPNSGRRFRSKIEVLYFLETGTLRKRKKSLDGNSADGSEEPKSKKSSSNAKSAPLNFDFFNVPEKVE
WVLTDPSQEAWTPFINNEKVPESTKREWVAAFQLLGRSKV

Carg12373 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome