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Carg12383 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12383
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncyclin-dependent protein kinase inhibitor SMR4-like
Genome locationCarg_Chr01:3299159..3299365
RNA-Seq ExpressionCarg12383
SyntenyCarg12383
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067757.1 hypothetical protein E6C27_scaffold352G00780 [Cucumis melo var. makuwa]9.3e-0863.16Show/hide
Query:  MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREA--PANGYFQLP-DDLEVYFL
        M+G+RTPER EFRI PA +PPPP +K  V   K REA    NGYFQLP DDLE +FL
Subjt:  MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREA--PANGYFQLP-DDLEVYFL

KAF8022732.1 hypothetical protein BT93_F0293 [Corymbia citriodora subsp. variegata]1.4e-0857.63Show/hide
Query:  EGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVA
        +G  TP R EFRI  A  PPPPPRKK +   KKR  P NGYFQ PDDLE+ F    R A
Subjt:  EGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVA

KAG6607256.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2897.06Show/hide
Query:  MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVAGGGDLSGG
        MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRV  GGDLSGG
Subjt:  MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVAGGGDLSGG

KAG7036940.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-30100Show/hide
Query:  MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVAGGGDLSGG
        MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVAGGGDLSGG
Subjt:  MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVAGGGDLSGG

XP_018720939.1 cyclin-dependent protein kinase inhibitor SMR4 [Eucalyptus grandis]1.2e-0755.93Show/hide
Query:  EGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVA
        +G  TP R EFRI  A  PPPPPRKK   + KKR  P +GYFQ PDDLE+ F    R A
Subjt:  EGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVA

TrEMBL top hitse value%identityAlignment
A0A059D4M4 Uncharacterized protein5.9e-0855.93Show/hide
Query:  EGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVA
        +G  TP R EFRI  A  PPPPPRKK   + KKR  P +GYFQ PDDLE+ F    R A
Subjt:  EGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVA

A0A5A7VKP1 Uncharacterized protein4.5e-0863.16Show/hide
Query:  MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREA--PANGYFQLP-DDLEVYFL
        M+G+RTPER EFRI PA +PPPP +K  V   K REA    NGYFQLP DDLE +FL
Subjt:  MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREA--PANGYFQLP-DDLEVYFL

A0A7I8K045 Hypothetical protein1.1e-0657.89Show/hide
Query:  EGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPR
        EG+ TP+R E RI      PPPPRKK V   K+RE P NGYFQ P DLE  F +VPR
Subjt:  EGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPR

A0A7I8K6X4 Hypothetical protein2.5e-0658.62Show/hide
Query:  EGYRTPERQEFRIQPAKVPPPPPRKKA-VAAAKKREAPANGYFQLPDDLEVYFLVVPR
        EG++TP R E RI  A   PPPPRKK+ V  AK+RE P NGYFQ P DLE+ F ++PR
Subjt:  EGYRTPERQEFRIQPAKVPPPPPRKKA-VAAAKKREAPANGYFQLPDDLEVYFLVVPR

W9RUH3 Uncharacterized protein1.0e-0754.24Show/hide
Query:  EGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVA
        +G  TP+R E RI+    PPPPPRKK   A KKR+ P NGYF  P DLE +F + PR A
Subjt:  EGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVA

SwissProt top hitse value%identityAlignment
Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR41.8e-0652.63Show/hide
Query:  EGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPR
        EG  TP    +RI  A V PPPPRKK +   +KR+ P NGYFQ P DLE  F   PR
Subjt:  EGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPR

Arabidopsis top hitse value%identityAlignment
AT5G02220.1 unknown protein1.3e-0752.63Show/hide
Query:  EGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPR
        EG  TP    +RI  A V PPPPRKK +   +KR+ P NGYFQ P DLE  F   PR
Subjt:  EGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGATACCGAACGCCGGAGCGACAGGAGTTTCGAATTCAGCCGGCAAAGGTGCCACCGCCGCCGCCGAGGAAAAAGGCGGTTGCGGCGGCGAAGAAGCGGGAGGC
TCCAGCGAATGGATATTTTCAACTGCCTGACGATCTTGAAGTATATTTTTTAGTGGTTCCTAGAGTGGCCGGCGGCGGTGATCTGAGTGGTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGATACCGAACGCCGGAGCGACAGGAGTTTCGAATTCAGCCGGCAAAGGTGCCACCGCCGCCGCCGAGGAAAAAGGCGGTTGCGGCGGCGAAGAAGCGGGAGGC
TCCAGCGAATGGATATTTTCAACTGCCTGACGATCTTGAAGTATATTTTTTAGTGGTTCCTAGAGTGGCCGGCGGCGGTGATCTGAGTGGTGGCTAG
Protein sequenceShow/hide protein sequence
MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVAGGGDLSGG