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Carg12396 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12396
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr01:3369198..3372415
RNA-Seq ExpressionCarg12396
SyntenyCarg12396
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036953.1 hypothetical protein SDJN02_00573, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-28100Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKLKKSGGEDDPNGNNSQPASRGNWWQ
        MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKLKKSGGEDDPNGNNSQPASRGNWWQ
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKLKKSGGEDDPNGNNSQPASRGNWWQ

XP_022158127.1 uncharacterized protein LOC111024684 [Momordica charantia]9.0e-1646.83Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------
        MEGKS GYQTSSFVADLFDV+E PLSSASGV AA+FPSPQK                                                           
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------

Query:  -LKKSGGEDDPNGNNSQPASRGNWWQ
         LKKSGGEDDP GNNSQ ASRGNWWQ
Subjt:  -LKKSGGEDDPNGNNSQPASRGNWWQ

XP_022948634.1 uncharacterized protein LOC111452257 isoform X1 [Cucurbita moschata]1.3e-1950.77Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------
        MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK                                                           
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------

Query:  -----LKKSGGEDDPNGNNSQPASRGNWWQ
             LKKSGGEDDPNGNNSQPASRGNWWQ
Subjt:  -----LKKSGGEDDPNGNNSQPASRGNWWQ

XP_023523189.1 uncharacterized protein LOC111787454 [Cucurbita pepo subsp. pepo]5.1e-1950Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------
        MEGK NGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK                                                           
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------

Query:  -----LKKSGGEDDPNGNNSQPASRGNWWQ
             LKKSGGEDDPNGNNSQPASRGNWWQ
Subjt:  -----LKKSGGEDDPNGNNSQPASRGNWWQ

XP_023525537.1 uncharacterized protein LOC111789122 [Cucurbita pepo subsp. pepo]1.9e-1849.23Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------
        MEGK NGYQTSSFVADLFDVEESPLSSASGVLA MFPSPQK                                                           
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------

Query:  -----LKKSGGEDDPNGNNSQPASRGNWWQ
             LKKSGGEDDPNGNNSQPASRGNWWQ
Subjt:  -----LKKSGGEDDPNGNNSQPASRGNWWQ

TrEMBL top hitse value%identityAlignment
A0A0A0LXG9 Uncharacterized protein1.2e-1341.79Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------
        MEGKS GYQ SSFVADLFDV+E+PLSSASG  A +FPSPQK                                                           
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------

Query:  --------LKKSGG-EDDPNGNNSQPASRGNWWQ
                +KKSGG +DDPNGNNSQPASRGNWWQ
Subjt:  --------LKKSGG-EDDPNGNNSQPASRGNWWQ

A0A1S3C5M6 uncharacterized protein LOC1034971233.1e-1442.54Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------
        MEGKS GYQTSSFVADLFDV+E+PLSSASG  A +FPSPQK                                                           
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------

Query:  --------LKKSGG-EDDPNGNNSQPASRGNWWQ
                +KKSGG +DDPNGNNSQPASRGNWWQ
Subjt:  --------LKKSGG-EDDPNGNNSQPASRGNWWQ

A0A5D3BEB7 Uncharacterized protein3.1e-1442.54Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------
        MEGKS GYQTSSFVADLFDV+E+PLSSASG  A +FPSPQK                                                           
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------

Query:  --------LKKSGG-EDDPNGNNSQPASRGNWWQ
                +KKSGG +DDPNGNNSQPASRGNWWQ
Subjt:  --------LKKSGG-EDDPNGNNSQPASRGNWWQ

A0A6J1DYH4 uncharacterized protein LOC1110246844.4e-1646.83Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------
        MEGKS GYQTSSFVADLFDV+E PLSSASGV AA+FPSPQK                                                           
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------

Query:  -LKKSGGEDDPNGNNSQPASRGNWWQ
         LKKSGGEDDP GNNSQ ASRGNWWQ
Subjt:  -LKKSGGEDDPNGNNSQPASRGNWWQ

A0A6J1GAG9 uncharacterized protein LOC111452257 isoform X16.5e-2050.77Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------
        MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK                                                           
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-----------------------------------------------------------

Query:  -----LKKSGGEDDPNGNNSQPASRGNWWQ
             LKKSGGEDDPNGNNSQPASRGNWWQ
Subjt:  -----LKKSGGEDDPNGNNSQPASRGNWWQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAAAGTCTAATGGATATCAGACCTCCTCTTTTGTTGCCGATCTTTTCGATGTCGAGGAGTCGCCATTGTCATCAGCATCAGGAGTTCTTGCAGCAATGTTTCC
TTCTCCACAGAAGTTGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTCTCAACCTGCTTCTAGGGGAAACTGGTGGCAA
mRNA sequenceShow/hide mRNA sequence
TGATTTCCCGGAAGAAAATGCGCCCATCTTCAGGGTGTGGTGGAATCTCAGGGTAATTTTGTTTGGTTAGAAGGAAAGATTGAGAGAAAAATGGAGGGAAAGTCTAATGG
ATATCAGACCTCCTCTTTTGTTGCCGATCTTTTCGATGTCGAGGAGTCGCCATTGTCATCAGCATCAGGAGTTCTTGCAGCAATGTTTCCTTCTCCACAGAAGTTGAAGA
AAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTCTCAACCTGCTTCTAGGGGAAACTGGTGGCAA
Protein sequenceShow/hide protein sequence
MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKLKKSGGEDDPNGNNSQPASRGNWWQ