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Carg12399 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12399
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCopper transporter
Genome locationCarg_Chr01:3388971..3389357
RNA-Seq ExpressionCarg12399
SyntenyCarg12399
Gene Ontology termsGO:0006878 - cellular copper ion homeostasis (biological process)
GO:0035434 - copper ion transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005375 - copper ion transmembrane transporter activity (molecular function)
InterPro domainsIPR007274 - Ctr copper transporter


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031772.1 putative Copper transporter [Cucumis melo var. makuwa]4.3e-4674.62Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
        ME HMTF+WGK+ EILF GWPGRS  SY +AL+FVFL+AF VEWLSHTK T  V  ++ AG VQT LYGVRVGLAF+VMLAVMS+NVGVLLAAV GYS+G
Subjt:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG

Query:  FLVYGSRVFNRSKID--LNLNMSDIPPLNC
        FLVYGSRVF+RSK+D  LNL++SD+PPLNC
Subjt:  FLVYGSRVFNRSKID--LNLNMSDIPPLNC

KAG6607279.1 Copper transporter 1, partial [Cucurbita argyrosperma subsp. sororia]2.0e-4899.07Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
        MEFHMTFFWGKSAEILFAGWPGR+SLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
Subjt:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG

Query:  FLVYGSR
        FLVYGSR
Subjt:  FLVYGSR

XP_022948639.1 copper transporter 1-like [Cucurbita moschata]1.2e-6199.22Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
        MEFHMTFFWGKSAEILFAGWPGR+SLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
Subjt:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG

Query:  FLVYGSRVFNRSKIDLNLNMSDIPPLNC
        FLVYGSRVFNRSKIDLNLNMSDIPPLNC
Subjt:  FLVYGSRVFNRSKIDLNLNMSDIPPLNC

XP_022998910.1 copper transporter 1-like [Cucurbita maxima]7.2e-6299.22Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
        MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVF+FLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
Subjt:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG

Query:  FLVYGSRVFNRSKIDLNLNMSDIPPLNC
        FLVYGSRVFNRSKIDLNLNMSDIPPLNC
Subjt:  FLVYGSRVFNRSKIDLNLNMSDIPPLNC

XP_023525766.1 copper transporter 1-like [Cucurbita pepo subsp. pepo]5.5e-62100Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
        MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
Subjt:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG

Query:  FLVYGSRVFNRSKIDLNLNMSDIPPLNC
        FLVYGSRVFNRSKIDLNLNMSDIPPLNC
Subjt:  FLVYGSRVFNRSKIDLNLNMSDIPPLNC

TrEMBL top hitse value%identityAlignment
A0A0A0LXH5 Copper transporter3.0e-4572.31Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
        ME HMTF+WGK+ EILF GWPGRS  S  I L+FVFL+AF VEWLSHTK T S  D++ AG VQT LYG+RVGLAF+VMLAVMS+NVG+LLAAV GYS+G
Subjt:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG

Query:  FLVYGSRVFNRSKIDLNLNMS--DIPPLNC
        FLVYGS++FNRSKID NLN+   D+PPLNC
Subjt:  FLVYGSRVFNRSKIDLNLNMS--DIPPLNC

A0A5A7SL08 Copper transporter2.1e-4674.62Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
        ME HMTF+WGK+ EILF GWPGRS  SY +AL+FVFL+AF VEWLSHTK T  V  ++ AG VQT LYGVRVGLAF+VMLAVMS+NVGVLLAAV GYS+G
Subjt:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG

Query:  FLVYGSRVFNRSKID--LNLNMSDIPPLNC
        FLVYGSRVF+RSK+D  LNL++SD+PPLNC
Subjt:  FLVYGSRVFNRSKID--LNLNMSDIPPLNC

A0A5D3BC00 Copper transporter6.0e-4673.85Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
        ME HMTF+WGK+ EILF GWPGRS  SY +AL+FVFL+AF VEWLSHTK T  V  ++ AG VQT LYGVRVGLAF+VMLAVMS+NVGVLLAAV GYS+G
Subjt:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG

Query:  FLVYGSRVFNRSKID--LNLNMSDIPPLNC
        FLVYGS+VF+RSK+D  LNL++SD+PPLNC
Subjt:  FLVYGSRVFNRSKID--LNLNMSDIPPLNC

A0A6J1GAH5 Copper transporter6.0e-6299.22Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
        MEFHMTFFWGKSAEILFAGWPGR+SLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
Subjt:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG

Query:  FLVYGSRVFNRSKIDLNLNMSDIPPLNC
        FLVYGSRVFNRSKIDLNLNMSDIPPLNC
Subjt:  FLVYGSRVFNRSKIDLNLNMSDIPPLNC

A0A6J1KDT9 Copper transporter3.5e-6299.22Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
        MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVF+FLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
Subjt:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG

Query:  FLVYGSRVFNRSKIDLNLNMSDIPPLNC
        FLVYGSRVFNRSKIDLNLNMSDIPPLNC
Subjt:  FLVYGSRVFNRSKIDLNLNMSDIPPLNC

SwissProt top hitse value%identityAlignment
Q39065 Copper transporter 12.6e-3051.15Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDV---FAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGY
        M  HMTFFWGK+ E+LF+GWPG SS  YA+ L+FVF +A   EWL+H+ L      D     AG +QTA+Y +R+GLA++VMLAVMSFN GV L A+AG+
Subjt:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDV---FAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGY

Query:  SVGFLVYGSRVFNRSKIDLNLNMSDIPPLNC
        +VGF+++GS+ F  +  D   N   +PP  C
Subjt:  SVGFLVYGSRVFNRSKIDLNLNMSDIPPLNC

Q8GWP3 Copper transporter 62.5e-2552.21Show/hide
Query:  HMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA-GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFL
        HMTFFWGK+ EILF+GWPG S   Y + L+ VFL+A  VEWL+H+ +         A G VQTA+Y ++ GLA++VMLAVMSFN GV + A+AG++VGF+
Subjt:  HMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA-GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFL

Query:  VYGSRVFNRSKID
        ++GS  F     D
Subjt:  VYGSRVFNRSKID

Q8SAA5 Copper transporter 41.6e-1943.86Show/hide
Query:  HMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASV---ADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
        H TF+WG + ++LF+GWPG     YA+AL+FVF +AF  EWL+     +S+   AD +     +TA+Y V+ G +++V+LAV+SFN GV LAA+ G+++G
Subjt:  HMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASV---ADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG

Query:  FLVYGSRVFNRSKI
        F V+  R F    I
Subjt:  FLVYGSRVFNRSKI

Q9FGU8 Copper transporter 33.8e-2149.06Show/hide
Query:  HMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLV
        HMTFFWGK+ E+LF GWPG S   Y + L  +F+++   E LS      S    +  G +QTA+Y VR  L+++VMLAVMSFN GV +AA+AG+ +GF++
Subjt:  HMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLV

Query:  YGSRVF
        +GSR F
Subjt:  YGSRVF

Q9STG2 Copper transporter 26.0e-2751.72Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTK-LTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSV
        M  HMTFFWGK+ E+LF+GWPG SS  YA+ L+ +FL+A   EWL+H+  L  S + +  AG  QTA+Y ++ GL+++VMLAVMSFN GV + A+AGY V
Subjt:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTK-LTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSV

Query:  GFLVYGSRVFNRSKID
        GF ++GS  F +   D
Subjt:  GFLVYGSRVFNRSKID

Arabidopsis top hitse value%identityAlignment
AT2G26975.1 Ctr copper transporter family1.8e-2652.21Show/hide
Query:  HMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA-GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFL
        HMTFFWGK+ EILF+GWPG S   Y + L+ VFL+A  VEWL+H+ +         A G VQTA+Y ++ GLA++VMLAVMSFN GV + A+AG++VGF+
Subjt:  HMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA-GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFL

Query:  VYGSRVFNRSKID
        ++GS  F     D
Subjt:  VYGSRVFNRSKID

AT2G37925.1 copper transporter 41.1e-2043.86Show/hide
Query:  HMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASV---ADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG
        H TF+WG + ++LF+GWPG     YA+AL+FVF +AF  EWL+     +S+   AD +     +TA+Y V+ G +++V+LAV+SFN GV LAA+ G+++G
Subjt:  HMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASV---ADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVG

Query:  FLVYGSRVFNRSKI
        F V+  R F    I
Subjt:  FLVYGSRVFNRSKI

AT3G46900.1 copper transporter 24.3e-2851.72Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTK-LTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSV
        M  HMTFFWGK+ E+LF+GWPG SS  YA+ L+ +FL+A   EWL+H+  L  S + +  AG  QTA+Y ++ GL+++VMLAVMSFN GV + A+AGY V
Subjt:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTK-LTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSV

Query:  GFLVYGSRVFNRSKID
        GF ++GS  F +   D
Subjt:  GFLVYGSRVFNRSKID

AT5G59030.1 copper transporter 11.9e-3151.15Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDV---FAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGY
        M  HMTFFWGK+ E+LF+GWPG SS  YA+ L+FVF +A   EWL+H+ L      D     AG +QTA+Y +R+GLA++VMLAVMSFN GV L A+AG+
Subjt:  MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDV---FAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGY

Query:  SVGFLVYGSRVFNRSKIDLNLNMSDIPPLNC
        +VGF+++GS+ F  +  D   N   +PP  C
Subjt:  SVGFLVYGSRVFNRSKIDLNLNMSDIPPLNC

AT5G59040.1 copper transporter 32.7e-2249.06Show/hide
Query:  HMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLV
        HMTFFWGK+ E+LF GWPG S   Y + L  +F+++   E LS      S    +  G +QTA+Y VR  L+++VMLAVMSFN GV +AA+AG+ +GF++
Subjt:  HMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLV

Query:  YGSRVF
        +GSR F
Subjt:  YGSRVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCCACATGACATTTTTCTGGGGAAAGTCGGCGGAGATTCTGTTCGCCGGCTGGCCTGGCCGGAGCTCACTCTCTTACGCCATCGCCTTAGTCTTCGTCTTTCT
CGTAGCCTTCGCCGTGGAGTGGCTGTCGCACACTAAACTCACCGCCTCTGTCGCCGATGACGTCTTCGCCGGCTTTGTTCAGACCGCCCTGTACGGCGTCCGGGTGGGGT
TGGCTTTTGTCGTCATGCTGGCCGTCATGTCATTCAATGTCGGAGTCCTGCTTGCGGCGGTGGCCGGGTATTCGGTCGGGTTCTTGGTTTATGGGAGCCGGGTTTTTAAT
AGATCCAAAATTGACCTAAATTTGAATATGTCTGATATACCACCGCTTAATTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTCCACATGACATTTTTCTGGGGAAAGTCGGCGGAGATTCTGTTCGCCGGCTGGCCTGGCCGGAGCTCACTCTCTTACGCCATCGCCTTAGTCTTCGTCTTTCT
CGTAGCCTTCGCCGTGGAGTGGCTGTCGCACACTAAACTCACCGCCTCTGTCGCCGATGACGTCTTCGCCGGCTTTGTTCAGACCGCCCTGTACGGCGTCCGGGTGGGGT
TGGCTTTTGTCGTCATGCTGGCCGTCATGTCATTCAATGTCGGAGTCCTGCTTGCGGCGGTGGCCGGGTATTCGGTCGGGTTCTTGGTTTATGGGAGCCGGGTTTTTAAT
AGATCCAAAATTGACCTAAATTTGAATATGTCTGATATACCACCGCTTAATTGTTAA
Protein sequenceShow/hide protein sequence
MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFN
RSKIDLNLNMSDIPPLNC