; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12439 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12439
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNon-specific lipid-transfer protein
Genome locationCarg_Chr14:71310..72017
RNA-Seq ExpressionCarg12439
SyntenyCarg12439
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0010143 - cutin biosynthetic process (biological process)
GO:0044403 - symbiotic process (biological process)
GO:0090379 - secondary cell wall biogenesis involved in seed trichome differentiation (biological process)
GO:0008134 - transcription factor binding (molecular function)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580430.1 hypothetical protein SDJN03_20432, partial [Cucurbita argyrosperma subsp. sororia]8.6e-5498.28Show/hide
Query:  MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV
        MERSMKMAIIVGVVLMCMVV EAAITCGAVV+SLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV
Subjt:  MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV

Query:  RIPYKISPSTDCNKVN
        RIPYKISPSTDCNKVN
Subjt:  RIPYKISPSTDCNKVN

KAG7017187.1 hypothetical protein SDJN02_19049 [Cucurbita argyrosperma subsp. argyrosperma]4.5e-55100Show/hide
Query:  MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV
        MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV
Subjt:  MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV

Query:  RIPYKISPSTDCNKVN
        RIPYKISPSTDCNKVN
Subjt:  RIPYKISPSTDCNKVN

XP_022935125.1 non-specific lipid-transfer protein 1-like [Cucurbita moschata]1.4e-4889.66Show/hide
Query:  MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV
        MERSMKMAIIVGVVLMCMVVGEAAI+CG V  S++PCI YLKNPSSGVPAACCNGIRSLNSQASTSVDRR ACTCLKSAANSISGINFNAAS+LPS+CGV
Subjt:  MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV

Query:  RIPYKISPSTDCNKVN
         IPYKISPSTDC+KVN
Subjt:  RIPYKISPSTDCNKVN

XP_022982607.1 non-specific lipid-transfer protein 1-like [Cucurbita maxima]2.7e-4784.48Show/hide
Query:  MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV
        MERSMKMAI+VGVVLMCMVVGEAAI+CG V +S+APCIPYL+NPS+G+PAACC+GIRSLNSQASTS DRR AC CLKSAANS+SGIN+NAAS+LPS+CGV
Subjt:  MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV

Query:  RIPYKISPSTDCNKVN
         IPYKISPSTDCNKVN
Subjt:  RIPYKISPSTDCNKVN

XP_023528122.1 non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo]1.8e-5193.97Show/hide
Query:  MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV
        MERSMKMAIIVGVVLMCMVVGEAAITCGAV +S+APCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRR ACTCLKSAA+SI GINFNAAS+LPSQCGV
Subjt:  MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV

Query:  RIPYKISPSTDCNKVN
        RIPYKISPSTDCNKVN
Subjt:  RIPYKISPSTDCNKVN

TrEMBL top hitse value%identityAlignment
A0A0A0LF44 Non-specific lipid-transfer protein4.9e-3168.81Show/hide
Query:  IVGVVLMCMVV-GEAA-ITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGVRIPYKIS
        IVG+V+MCMVV GEAA +TCG V +S++ CI YL++    VP  CCNGIRSLNSQAST+VDRR AC CLK+AA SI GIN+ AA++LPS+CGV +PYKIS
Subjt:  IVGVVLMCMVV-GEAA-ITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGVRIPYKIS

Query:  PSTDCNKVN
        PSTDC KVN
Subjt:  PSTDCNKVN

A0A1S3B5F4 Non-specific lipid-transfer protein1.3e-3464.96Show/hide
Query:  MERSMKMAIIVGVVLMCMVV-GEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCG
        ME  +K  +IVG+V+MCMVV GEAA+TCG+V  ++ PCIPYL++PS+ VPA CC+GIRSLN QA+T+ DRR AC CLKSAA SISGIN+ AA+ LP +CG
Subjt:  MERSMKMAIIVGVVLMCMVV-GEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCG

Query:  VRIPYKISPSTDCNKVN
        V I Y ISP+TDC++VN
Subjt:  VRIPYKISPSTDCNKVN

A0A5D3DMS3 Non-specific lipid-transfer protein1.3e-3464.96Show/hide
Query:  MERSMKMAIIVGVVLMCMVV-GEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCG
        ME  +K  +IVG+V+MCMVV GEAA+TCG+V  ++ PCIPYL++PS+ VPA CC+GIRSLN QA+T+ DRR AC CLKSAA SISGIN+ AA+ LP +CG
Subjt:  MERSMKMAIIVGVVLMCMVV-GEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCG

Query:  VRIPYKISPSTDCNKVN
        V I Y ISP+TDC++VN
Subjt:  VRIPYKISPSTDCNKVN

A0A6J1F9Q5 Non-specific lipid-transfer protein6.9e-4989.66Show/hide
Query:  MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV
        MERSMKMAIIVGVVLMCMVVGEAAI+CG V  S++PCI YLKNPSSGVPAACCNGIRSLNSQASTSVDRR ACTCLKSAANSISGINFNAAS+LPS+CGV
Subjt:  MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV

Query:  RIPYKISPSTDCNKVN
         IPYKISPSTDC+KVN
Subjt:  RIPYKISPSTDCNKVN

A0A6J1IX25 Non-specific lipid-transfer protein1.3e-4784.48Show/hide
Query:  MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV
        MERSMKMAI+VGVVLMCMVVGEAAI+CG V +S+APCIPYL+NPS+G+PAACC+GIRSLNSQASTS DRR AC CLKSAANS+SGIN+NAAS+LPS+CGV
Subjt:  MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGV

Query:  RIPYKISPSTDCNKVN
         IPYKISPSTDCNKVN
Subjt:  RIPYKISPSTDCNKVN

SwissProt top hitse value%identityAlignment
P19656 Non-specific lipid-transfer protein4.2e-2750.83Show/hide
Query:  MERSMKMAI----IVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPS
        M R+ ++A+    +V +VL+     EAAI+CG V +++APCI Y +   SG  A CC+G+RSLN+ A T+ DRRAAC CLK+AA  +SG+N   A+++PS
Subjt:  MERSMKMAI----IVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPS

Query:  QCGVRIPYKISPSTDCNKVN
        +CGV IPY IS STDC++VN
Subjt:  QCGVRIPYKISPSTDCNKVN

P85894 Non-specific lipid-transfer protein 12.7e-2664.84Show/hide
Query:  ITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGVRIPYKISPSTDCNKV
        ITCG V +SLAPCI YL+     VPA CCNG+RSLN+ A T+ DR+AAC CLKSA NSI G+N N A+ LP +CGV +PYKISPSTDC  V
Subjt:  ITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGVRIPYKISPSTDCNKV

Q42762 Non-specific lipid-transfer protein4.9e-2859.83Show/hide
Query:  SMKMAIIVGVVLMCMVVG----EAAITCGAVVNSLAPCIPYLKNPSSG-VPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQC
        S+K+A    VV++CMVVG    + A+T G V NSLAPCI YL+   +G VP  CC GI+SLNS A T+  R+AAC C+KSAA  I+GINF  AS LP +C
Subjt:  SMKMAIIVGVVLMCMVVG----EAAITCGAVVNSLAPCIPYLKNPSSG-VPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQC

Query:  GVRIPYKISPSTDCNKV
        GV IPYKISPSTDCN V
Subjt:  GVRIPYKISPSTDCNKV

Q43129 Non-specific lipid-transfer protein4.9e-2859.83Show/hide
Query:  SMKMAIIVGVVLMCMVVG----EAAITCGAVVNSLAPCIPYLKNPSSG-VPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQC
        S+K+A    VV++CMVVG    + A+T G V NSLAPCI YL+   +G VP  CC GI+SLNS A T+  R+AAC C+KSAA  I+GINF  AS LP +C
Subjt:  SMKMAIIVGVVLMCMVVG----EAAITCGAVVNSLAPCIPYLKNPSSG-VPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQC

Query:  GVRIPYKISPSTDCNKV
        GV IPYKISPSTDCN V
Subjt:  GVRIPYKISPSTDCNKV

Q43194 Non-specific lipid-transfer protein 27.1e-2750Show/hide
Query:  MERSMKMAIIVGV------VLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNL
        M RSMK+A+ + V      V++     EAA+TCG V +++ PC+ Y +   SG  A CC+G+RSLNS A T+ DRRAAC CLK+AA  I G+N   A+++
Subjt:  MERSMKMAIIVGV------VLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNL

Query:  PSQCGVRIPYKISPSTDCNKVN
        PS+CGV IPY IS STDC++V+
Subjt:  PSQCGVRIPYKISPSTDCNKVN

Arabidopsis top hitse value%identityAlignment
AT2G38540.1 lipid transfer protein 11.2e-1844.44Show/hide
Query:  MKMAIIVGVVLMCMVV-----GEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSI-SGINFNAASNLPSQC
        MK+A +   +L CM+V       AA++CG+V ++LA CI Y+      +P ACC+G+++LNS A T+ DR+ AC C++ AA ++ SG+N   A+ +P  C
Subjt:  MKMAIIVGVVLMCMVV-----GEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSI-SGINFNAASNLPSQC

Query:  GVRIPYKISPSTDCNKV
        GV IPYKIS ST+C  V
Subjt:  GVRIPYKISPSTDCNKV

AT3G08770.1 lipid transfer protein 63.9e-2045.22Show/hide
Query:  RSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAAN--SISGINFNAASNLPSQCGV
        RS+ +A+ + + L C   GEAA++C  V+  L PC+ Y+      VP  CCNG+ +L SQA TSVDR+  C C+KSA    ++S      A  LPS+CGV
Subjt:  RSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAAN--SISGINFNAASNLPSQCGV

Query:  RIPYKISPSTDCNKV
         +PYK SPSTDC+ +
Subjt:  RIPYKISPSTDCNKV

AT3G08770.2 lipid transfer protein 61.1e-1946.02Show/hide
Query:  RSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAAN--SISGINFNAASNLPSQCGV
        RS+ +A+ + + L C   GEAA++C  V+  L PC+ Y+      VP  CCNG+ +L SQA TSVDR+  C C+KSA    ++S      A  LPS+CGV
Subjt:  RSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAAN--SISGINFNAASNLPSQCGV

Query:  RIPYKISPSTDCN
         +PYK SPSTDC+
Subjt:  RIPYKISPSTDCN

AT5G59310.1 lipid transfer protein 44.3e-1952.75Show/hide
Query:  EAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGVRIPYKISPSTDC
        +AAITCG V +SL+PC+ YL +    VP  CC G++ LN  A T+ DR+ AC CL+SAA    G+N + AS LP +CGV IPY IS ST+C
Subjt:  EAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGVRIPYKISPSTDC

AT5G59320.1 lipid transfer protein 33.2e-2251.92Show/hide
Query:  VVLMCMVVG-EAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGVRIPYKISPSTD
        V+ +C+V   +AAI+CG V  SLAPC  YL +    VP +CC G+++LNS A T+ DR+ AC C++S A SISG+N + AS LP +CGV IPY IS ST+
Subjt:  VVLMCMVVG-EAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGVRIPYKISPSTD

Query:  CNKV
        CN +
Subjt:  CNKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGAAGCATGAAGATGGCGATTATTGTGGGTGTTGTTTTGATGTGCATGGTAGTGGGTGAAGCGGCTATTACATGCGGGGCAGTGGTTAACTCATTGGCTCCGTG
CATCCCATATTTGAAAAATCCATCCTCTGGTGTTCCAGCAGCATGTTGCAATGGCATAAGGTCCTTGAACAGCCAAGCCTCCACCTCTGTTGATCGACGCGCCGCTTGCA
CCTGCTTGAAGTCTGCTGCGAATAGCATCTCTGGGATCAACTTTAACGCCGCGTCTAACCTTCCAAGCCAGTGTGGCGTCCGCATTCCTTATAAGATCAGCCCCAGCACC
GACTGCAACAAGGTGAACTGA
mRNA sequenceShow/hide mRNA sequence
AAAATAAGCCAAAGCATAAGTGAGTTTCATCGAGAAGAGAAGAGGAGAAGAGAAGAGGAGAGGAGAAAATGGAGCGAAGCATGAAGATGGCGATTATTGTGGGTGTTGTT
TTGATGTGCATGGTAGTGGGTGAAGCGGCTATTACATGCGGGGCAGTGGTTAACTCATTGGCTCCGTGCATCCCATATTTGAAAAATCCATCCTCTGGTGTTCCAGCAGC
ATGTTGCAATGGCATAAGGTCCTTGAACAGCCAAGCCTCCACCTCTGTTGATCGACGCGCCGCTTGCACCTGCTTGAAGTCTGCTGCGAATAGCATCTCTGGGATCAACT
TTAACGCCGCGTCTAACCTTCCAAGCCAGTGTGGCGTCCGCATTCCTTATAAGATCAGCCCCAGCACCGACTGCAACAAGGTGAACTGAGGGCGGAGGTGATGTTAGCGT
AGCCGAAGTTTAATTCCCATAGCAGTACCAGAATGAATAAGAGCATGGGTGGTTTCCTGCTTTTACTATCTCTTTTTCTTGTTTCCATTAGTGAGCGTGTTGTATGGGAT
TCCAATGGCACACGTGTCATTGCGAGTTCTAATATATTATTAAGAATATTAATCTATTTCCTCTTTTTCT
Protein sequenceShow/hide protein sequence
MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGVRIPYKISPST
DCNKVN