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Carg12442 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12442
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:89475..91554
RNA-Seq ExpressionCarg12442
SyntenyCarg12442
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022934637.1 uncharacterized protein LOC111441772 [Cucurbita moschata]7.6e-82100Show/hide
Query:  MGELNRAKLGMVRIKTHLDPKVAGPITNSRPALGDQVARIPATPNGTSGKPILWTASSSNDWANITVVDGTTSNSLAYSFAIVADSDRSDEQDRTATTVW
        MGELNRAKLGMVRIKTHLDPKVAGPITNSRPALGDQVARIPATPNGTSGKPILWTASSSNDWANITVVDGTTSNSLAYSFAIVADSDRSDEQDRTATTVW
Subjt:  MGELNRAKLGMVRIKTHLDPKVAGPITNSRPALGDQVARIPATPNGTSGKPILWTASSSNDWANITVVDGTTSNSLAYSFAIVADSDRSDEQDRTATTVW

Query:  DIVIGRHSPISGVNREGYSGSDLHGVTAKVVDMSHICQMIPNSVKINKIWGTGT
        DIVIGRHSPISGVNREGYSGSDLHGVTAKVVDMSHICQMIPNSVKINKIWGTGT
Subjt:  DIVIGRHSPISGVNREGYSGSDLHGVTAKVVDMSHICQMIPNSVKINKIWGTGT
XP_023528642.1 uncharacterized protein LOC111791501 isoform X1 [Cucurbita pepo subsp. pepo]6.3e-2890.41Show/hide
Query:  ITVVDGTTSNSLAYSFAIVADSDRSDEQDRTATTVWDIVIGRHSPISGVNREGYSGSDLHGVTAKVVDMSHIC
        ITVVDG TSNSLAYSFAIVADSDRSDEQDRT+TTVWDI+IGRHSPI GVNREGYS SDLHGVTAKVVDMS +C
Subjt:  ITVVDGTTSNSLAYSFAIVADSDRSDEQDRTATTVWDIVIGRHSPISGVNREGYSGSDLHGVTAKVVDMSHIC
XP_023528643.1 uncharacterized protein LOC111791501 isoform X2 [Cucurbita pepo subsp. pepo]6.7e-3891.11Show/hide
Query:  ITVVDGTTSNSLAYSFAIVADSDRSDEQDRTATTVWDIVIGRHSPISGVNREGYSGSDLHGVTAKVVDMSHICQMIPNSVKINKIWGTGT
        ITVVDG TSNSLAYSFAIVADSDRSDEQDRT+TTVWDI+IGRHSPI GVNREGYS SDLHGVTAKVVDMS +CQM PNSVKINKIWGTGT
Subjt:  ITVVDGTTSNSLAYSFAIVADSDRSDEQDRTATTVWDIVIGRHSPISGVNREGYSGSDLHGVTAKVVDMSHICQMIPNSVKINKIWGTGT
TrEMBL top hitse value%identityAlignment
A0A6J1F3D3 uncharacterized protein LOC1114417723.7e-82100Show/hide
Query:  MGELNRAKLGMVRIKTHLDPKVAGPITNSRPALGDQVARIPATPNGTSGKPILWTASSSNDWANITVVDGTTSNSLAYSFAIVADSDRSDEQDRTATTVW
        MGELNRAKLGMVRIKTHLDPKVAGPITNSRPALGDQVARIPATPNGTSGKPILWTASSSNDWANITVVDGTTSNSLAYSFAIVADSDRSDEQDRTATTVW
Subjt:  MGELNRAKLGMVRIKTHLDPKVAGPITNSRPALGDQVARIPATPNGTSGKPILWTASSSNDWANITVVDGTTSNSLAYSFAIVADSDRSDEQDRTATTVW

Query:  DIVIGRHSPISGVNREGYSGSDLHGVTAKVVDMSHICQMIPNSVKINKIWGTGT
        DIVIGRHSPISGVNREGYSGSDLHGVTAKVVDMSHICQMIPNSVKINKIWGTGT
Subjt:  DIVIGRHSPISGVNREGYSGSDLHGVTAKVVDMSHICQMIPNSVKINKIWGTGT
A0A803L3D3 Uncharacterized protein7.3e-0661.36Show/hide
Query:  QDRTATTVWDIVIGRHSPISGVNREGYSGSDLHGVTAKVVDMSH
        Q  ++ TVW  ++GRH PI  VNRE YSG DL G+TAKVVDM H
Subjt:  QDRTATTVWDIVIGRHSPISGVNREGYSGSDLHGVTAKVVDMSH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAACTTAATCGTGCCAAGCTTGGAATGGTCCGAATAAAAACCCATCTGGACCCGAAAGTAGCCGGCCCAATCACTAACTCTCGGCCTGCCCTCGGGGACCAAGT
CGCAAGGATTCCCGCCACTCCAAATGGGACAAGTGGGAAACCGATTTTATGGACCGCCAGTTCTTCGAATGATTGGGCAAACATCACCGTTGTCGATGGGACAACCTCTA
ATTCTCTCGCTTATAGTTTCGCTATCGTCGCTGATTCCGATCGTTCCGATGAGCAAGATAGAACTGCCACAACAGTTTGGGACATCGTGATTGGTCGACATTCTCCAATT
TCTGGCGTCAATCGCGAGGGATACTCTGGAAGTGATCTTCATGGTGTGACTGCCAAAGTAGTGGACATGTCTCATATCTGTCAGATGATACCAAACTCTGTAAAAATCAA
TAAGATATGGGGAACGGGCACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAACTTAATCGTGCCAAGCTTGGAATGGTCCGAATAAAAACCCATCTGGACCCGAAAGTAGCCGGCCCAATCACTAACTCTCGGCCTGCCCTCGGGGACCAAGT
CGCAAGGATTCCCGCCACTCCAAATGGGACAAGTGGGAAACCGATTTTATGGACCGCCAGTTCTTCGAATGATTGGGCAAACATCACCGTTGTCGATGGGACAACCTCTA
ATTCTCTCGCTTATAGTTTCGCTATCGTCGCTGATTCCGATCGTTCCGATGAGCAAGATAGAACTGCCACAACAGTTTGGGACATCGTGATTGGTCGACATTCTCCAATT
TCTGGCGTCAATCGCGAGGGATACTCTGGAAGTGATCTTCATGGTGTGACTGCCAAAGTAGTGGACATGTCTCATATCTGTCAGATGATACCAAACTCTGTAAAAATCAA
TAAGATATGGGGAACGGGCACCTAGATGCAGCCATAGAGCCTTTTTGTGGCTATCTCTTAAGCTAAACATTATCCACTTCAATCACATATCTAAAACTATTTTGGAACTT
TTTAGC
Protein sequenceShow/hide protein sequence
MGELNRAKLGMVRIKTHLDPKVAGPITNSRPALGDQVARIPATPNGTSGKPILWTASSSNDWANITVVDGTTSNSLAYSFAIVADSDRSDEQDRTATTVWDIVIGRHSPI
SGVNREGYSGSDLHGVTAKVVDMSHICQMIPNSVKINKIWGTGT