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Carg12451 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12451
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSel1-like protein
Genome locationCarg_Chr14:158163..160458
RNA-Seq ExpressionCarg12451
SyntenyCarg12451
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR006597 - Sel1-like repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442362.1 PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo]1.6e-4897Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGTEGL+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
XP_011651845.1 uncharacterized protein LOC101206121 [Cucumis sativus]3.9e-4795Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE L+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
XP_022157335.1 uncharacterized protein LOC111024062 [Momordica charantia]1.6e-4897Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGTEGLSRVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
XP_022934323.1 uncharacterized protein LOC111441521 [Cucurbita moschata]1.9e-49100Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
XP_022971526.1 uncharacterized protein LOC111470221 [Cucurbita maxima]2.2e-4592Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGTE L+RVPLSEVVSDC KRWFKDTL EAK GDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD++T DS
Subjt:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
TrEMBL top hitse value%identityAlignment
A0A1S3B5I4 uncharacterized protein LOC1034862547.7e-4997Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGTEGL+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
A0A5D3DNP0 Sel1-like protein7.7e-4997Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGTEGL+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
A0A6J1DSS4 uncharacterized protein LOC1110240627.7e-4997Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGTEGLSRVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
A0A6J1F7C2 uncharacterized protein LOC1114415219.1e-50100Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
A0A6J1J881 uncharacterized protein LOC1114821719.1e-50100Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)2.5e-3682.93Show/hide
Query:  VPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD
        VPLS VVSDCAKRWFKDTL+EAKAG+I MQVL+GQMYYSGYG+P+DA+KGR+W+TKASR RSSVWKV DK PGYNASDSDS+
Subjt:  VPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD
AT5G05360.1 unknown protein1.1e-3468.48Show/hide
Query:  SGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDE
        + G++ ++RVPL++VV DC +RWF+DTLKEAK+GD+ MQVLVGQMY SGYGIP+D  KGR W+ KASR+RSS W+VSDK PGYNASDSDS++
Subjt:  SGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDE
AT5G05360.2 unknown protein1.2e-3066.67Show/hide
Query:  SGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
        + G++ ++RVPL++VV DC +RWF+DTLKEAK+GD+ MQVLVGQMY SGYGIP+D  KGR W+ KASR+RSS W+VSDK PG N
Subjt:  SGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTAGCGGAGGAACAGAGGGCTTGAGTCGCGTTCCTTTATCAGAAGTTGTTTCTGATTGCGCCAAAAGATGGTTTAAGGACACTTTGAAGGAGGCCAAAGCCGG
CGACATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGATTCCTAGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGAT
CGTCTGTCTGGAAAGTTAGTGATAAACATCCAGGTTATAATGCTAGTGATTCCGATTCAGATGAACTGACTCGTGATTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTAGCGGAGGAACAGAGGGCTTGAGTCGCGTTCCTTTATCAGAAGTTGTTTCTGATTGCGCCAAAAGATGGTTTAAGGACACTTTGAAGGAGGCCAAAGCCGG
CGACATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGATTCCTAGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGAT
CGTCTGTCTGGAAAGTTAGTGATAAACATCCAGGTTATAATGCTAGTGATTCCGATTCAGATGAACTGACTCGTGATTCTTAACTACACCAATGTTGCTGATTCCTCTAT
GTTATGTCAAAACAGCTGCTGTATGTGCTTTTCACCGTGGAGACTCTACTACTTGGTCAGCTATGTGTGTAGCTGCGAAGAACTTGTGTACTTGCTTCCTGATTGTTGGA
TTTGACGGATGTAATATGCTTTGATTTCTACAAACAATCTTATATCCATTTTTTCACTTTCTGTTTAGGTTACCACTTTTCATTGTCTGCGGGAGATTTTCATTTGTTTT
TTGCATAAATGTCAAAATTTGAACTCTTTTGGTTGCTCTTTCAAATTCCCTGTCAAGAACACTCTTTTGGAAGCCTTTCCAAGCATGCTTCTACTTGCCTTCCCTTTCTT
AGTTGCTAGCTGT
Protein sequenceShow/hide protein sequence
MEISGGTEGLSRVPLSEVVSDCAKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS