CuGenDBv2

Gene ID	Carg12476
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	FCP1 homology domain-containing protein
Genome location	Carg_Chr14:283044..284951
RNA-Seq Expression	Carg12476
Synteny	Carg12476
Gene Ontology terms	GO:0016791 - phosphatase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0044171.1 CTD nuclear envelope phosphatase 1-like protein [Cucumis melo var. makuwa]

2.3e-43

48.7

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Query:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI
        FPLL SSAPSFKPLP AELPLHQFS KK+ SL+ +DD G Q  P EKITVVL+LDET VCAYETSSLP V   QATEAG NW ELECVSSDK        
Subjt:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI

Query:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV--------------YY-----LLLVLKVSLNCG----------------------
                     E EGKPKISYVT+FERPGLHEFLSQA +F  +              +Y     L+++L  +++CG                      
Subjt:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV--------------YY-----LLLVLKVSLNCG----------------------

Query:  --------EYREHVENLSFMQRNLLQICLL
                EYREHV++LS +QR+L ++ ++
Subjt:  --------EYREHVENLSFMQRNLLQICLL

KAG7027896.1 Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 [Cucurbita argyrosperma subsp. argyrosperma]

4.7e-41

51.49

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Query:  PLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEIY
        PLLASS+PSFKPLP AELPLHQ SAKK+   + VDD GS+  P EKITVVL+LDET VCAYETSSLP V   QATEAG NW +LECVSSDK         
Subjt:  PLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEIY

Query:  IIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNVY----------------------YLLLVLKVSLNCGEYREHVENLSFMQRNLLQIC
                    E EGKPKIS+VT+FERPGLHEFLSQA +F  +                       + L + + S    EYREHV++LS ++R+L ++ 
Subjt:  IIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNVY----------------------YLLLVLKVSLNCGEYREHVENLSFMQRNLLQIC

Query:  LL
        ++
Subjt:  LL

XP_004137719.1 CTD nuclear envelope phosphatase 1 homolog [Cucumis sativus]

2.1e-44

54.68

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Query:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI
        FPLL SSAPSFKPLP AELPLHQFS KK+ SLS +DD G Q  P EK+TVVL+LDET VCAYETSSLP V   QATEAG NW ELECVSSDK        
Subjt:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI

Query:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV---------YYLLLVLKV-------------SLNCGEYREHVENLSFMQRNLLQI
                     E EGKPKISYVT+FERPGLHEFLSQA +F ++         Y   LV ++             S    EYREHV++LS +QR+L ++
Subjt:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV---------YYLLLVLKV-------------SLNCGEYREHVENLSFMQRNLLQI

Query:  CLL
         ++
Subjt:  CLL

XP_008442416.1 PREDICTED: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like [Cucumis melo]

4.6e-44

54.68

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Query:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI
        FPLL SSAPSFKPLP AELPLHQFS KK+ SL+ +DD G Q  P EKITVVL+LDET VCAYETSSLP V   QATEAG NW ELECVSSDK        
Subjt:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI

Query:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV---------YYLLLVLKV-------------SLNCGEYREHVENLSFMQRNLLQI
                     E EGKPKISYVT+FERPGLHEFLSQA +F  +         Y   LV ++             S    EYREHV++LS +QR+L ++
Subjt:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV---------YYLLLVLKV-------------SLNCGEYREHVENLSFMQRNLLQI

Query:  CLL
         ++
Subjt:  CLL

XP_038903627.1 CTD nuclear envelope phosphatase 1-like [Benincasa hispida]

1.6e-44

54.68

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Query:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI
        FPLL SSAPSFKPLP AELPLHQFSAKK+ SLS VD  GSQ  P EK+TVVL+LDET VCAYETSSLP V   QATEAG NW ELECVSSDK        
Subjt:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI

Query:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNVY----------------------YLLLVLKVSLNCGEYREHVENLSFMQRNLLQI
                     E EGKPKISYVT+FERPGLHEFLSQA +F  +                       + L + + S    EYREHV++L+ +QR+L +I
Subjt:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNVY----------------------YLLLVLKVSLNCGEYREHVENLSFMQRNLLQI

Query:  CLL
         ++
Subjt:  CLL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDE8 FCP1 homology domain-containing protein

1.0e-44

54.68

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Query:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI
        FPLL SSAPSFKPLP AELPLHQFS KK+ SLS +DD G Q  P EK+TVVL+LDET VCAYETSSLP V   QATEAG NW ELECVSSDK        
Subjt:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI

Query:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV---------YYLLLVLKV-------------SLNCGEYREHVENLSFMQRNLLQI
                     E EGKPKISYVT+FERPGLHEFLSQA +F ++         Y   LV ++             S    EYREHV++LS +QR+L ++
Subjt:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV---------YYLLLVLKV-------------SLNCGEYREHVENLSFMQRNLLQI

Query:  CLL
         ++
Subjt:  CLL

A0A1S3B5M9 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like

2.2e-44

54.68

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Query:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI
        FPLL SSAPSFKPLP AELPLHQFS KK+ SL+ +DD G Q  P EKITVVL+LDET VCAYETSSLP V   QATEAG NW ELECVSSDK        
Subjt:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI

Query:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV---------YYLLLVLKV-------------SLNCGEYREHVENLSFMQRNLLQI
                     E EGKPKISYVT+FERPGLHEFLSQA +F  +         Y   LV ++             S    EYREHV++LS +QR+L ++
Subjt:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV---------YYLLLVLKV-------------SLNCGEYREHVENLSFMQRNLLQI

Query:  CLL
         ++
Subjt:  CLL

A0A5A7TRF8 CTD nuclear envelope phosphatase 1-like protein

1.1e-43

48.7

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Query:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI
        FPLL SSAPSFKPLP AELPLHQFS KK+ SL+ +DD G Q  P EKITVVL+LDET VCAYETSSLP V   QATEAG NW ELECVSSDK        
Subjt:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI

Query:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV--------------YY-----LLLVLKVSLNCG----------------------
                     E EGKPKISYVT+FERPGLHEFLSQA +F  +              +Y     L+++L  +++CG                      
Subjt:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV--------------YY-----LLLVLKVSLNCG----------------------

Query:  --------EYREHVENLSFMQRNLLQICLL
                EYREHV++LS +QR+L ++ ++
Subjt:  --------EYREHVENLSFMQRNLLQICLL

A0A5D3DN66 CTD nuclear envelope phosphatase 1-like protein

2.2e-44

54.68

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Query:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI
        FPLL SSAPSFKPLP AELPLHQFS KK+ SL+ +DD G Q  P EKITVVL+LDET VCAYETSSLP V   QATEAG NW ELECVSSDK        
Subjt:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI

Query:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV---------YYLLLVLKV-------------SLNCGEYREHVENLSFMQRNLLQI
                     E EGKPKISYVT+FERPGLHEFLSQA +F  +         Y   LV ++             S    EYREHV++LS +QR+L ++
Subjt:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV---------YYLLLVLKV-------------SLNCGEYREHVENLSFMQRNLLQI

Query:  CLL
         ++
Subjt:  CLL

E5GBF3 FCP1 homology domain-containing protein

2.2e-44

54.68

Show/hide

Query:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI
        FPLL SSAPSFKPLP AELPLHQFS KK+ SL+ +DD G Q  P EKITVVL+LDET VCAYETSSLP V   QATEAG NW ELECVSSDK        
Subjt:  FPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDKFFETFLEI

Query:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV---------YYLLLVLKV-------------SLNCGEYREHVENLSFMQRNLLQI
                     E EGKPKISYVT+FERPGLHEFLSQA +F  +         Y   LV ++             S    EYREHV++LS +QR+L ++
Subjt:  YIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV---------YYLLLVLKV-------------SLNCGEYREHVENLSFMQRNLLQI

Query:  CLL
         ++
Subjt:  CLL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G55960.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

4.3e-24

37.91

Show/hide

Query:  PLLASSAPS----FKPLPDAELPLHQFSAKKV---ISLSVVDDRGSQGL--PWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDK
        PLL+SSA +    FKPLP  EL L + S       I+ +   D  S G    ++++ VVL+LDET VCAYETSSLP     QA EAG  W ELEC+S+DK
Subjt:  PLLASSAPS----FKPLPDAELPLHQFSAKKV---ISLSVVDDRGSQGL--PWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELECVSSDK

Query:  FFETFLEIYIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV---------YYLLLVLKV-------------SLNCGEYREHVENLSF
                             E +GKPKI+YVT+FERPGLHEFL Q  +F ++         Y   LV ++             S    +YR+HV++L  
Subjt:  FFETFLEIYIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNV---------YYLLLVLKV-------------SLNCGEYREHVENLSF

Query:  MQRNLLQICLL
          +N+ +  ++
Subjt:  MQRNLLQICLL

Sequences

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CDS sequence

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ATGGAGGTCTGCGCGCCCTGCAAATCGTGCATGGTGCTCCTTCTTTGGCTTAGGTTTGGTCCTGCGTTGGTATTCCCTCTTCTTGCCTCATCTGCGCCCTCTTTCAAGCC
CTTGCCCGATGCTGAGCTTCCTCTTCATCAGTTTTCAGCAAAGAAAGTTATCTCTCTCAGTGTTGTGGATGATCGTGGAAGTCAAGGTCTCCCTTGGGAAAAGATTACGG
TGGTTCTTAATTTGGATGAAACCAGGGTTTGTGCATATGAAACATCCAGTTTGCCAGTCGTTTCTGGCATTCAAGCAACAGAAGCTGGATTTAATTGGTCCGAGCTGGAA
TGTGTATCCTCGGACAAGTTTTTTGAAACTTTCCTTGAAATTTATATTATTCATCGATTAATGTTGGAAGCTCTGTTGACGGAATGTGAAGGAAAACCAAAGATCAGTTA
CGTGACCCTATTCGAACGTCCTGGATTGCATGAGTTCTTGAGCCAGGCTATTGATTTTCCGAACGTATATTACTTACTGCTGGTCTTGAAGGTGTCTTTAAATTGCGGAG
AATACAGAGAACATGTAGAAAACCTATCATTTATGCAAAGAAATCTCTTACAAATTTGCCTTCTTCACCTTTTAGAGGACTTCCTGTTGGTGACCCTTCAACACTTCCTC
TCTTCAAACACCTGGCCCTGGGAAAAGACGTCAAACCCATTCTGTATGAAAATTTTCACATGCCTGAATGGTTTCAGATTCATGGATATCCTTTAG

mRNA sequence

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Protein sequence

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MEVCAPCKSCMVLLLWLRFGPALVFPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITVVLNLDETRVCAYETSSLPVVSGIQATEAGFNWSELE
CVSSDKFFETFLEIYIIHRLMLEALLTECEGKPKISYVTLFERPGLHEFLSQAIDFPNVYYLLLVLKVSLNCGEYREHVENLSFMQRNLLQICLLHLLEDFLLVTLQHFL
SSNTWPWEKTSNPFCMKIFTCLNGFRFMDIL

Carg12476 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome