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Carg12485 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12485
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:329363..332761
RNA-Seq ExpressionCarg12485
SyntenyCarg12485
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017232.1 hypothetical protein SDJN02_19095, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-84100Show/hide
Query:  MASASTVPLPIPPVGFSAFLLAGVNFAEGMKLQSGKAMKSVADCLVSWMRLVIFYKVHREGNRIEWVKSKISRTVASAYHKGGVEYESIEVNIFFHRRLS
        MASASTVPLPIPPVGFSAFLLAGVNFAEGMKLQSGKAMKSVADCLVSWMRLVIFYKVHREGNRIEWVKSKISRTVASAYHKGGVEYESIEVNIFFHRRLS
Subjt:  MASASTVPLPIPPVGFSAFLLAGVNFAEGMKLQSGKAMKSVADCLVSWMRLVIFYKVHREGNRIEWVKSKISRTVASAYHKGGVEYESIEVNIFFHRRLS

Query:  HYEITLVLYFMVDQQPPVSVITFQKVIAYHCGYMPTCLVPIYLRGTTIRNAASSTTSSNER
        HYEITLVLYFMVDQQPPVSVITFQKVIAYHCGYMPTCLVPIYLRGTTIRNAASSTTSSNER
Subjt:  HYEITLVLYFMVDQQPPVSVITFQKVIAYHCGYMPTCLVPIYLRGTTIRNAASSTTSSNER

XP_022934635.1 uncharacterized protein LOC111441770 [Cucurbita moschata]1.3e-04100Show/hide
Query:  MPTCLVPIYLRGTTIRNAASSTTSSNER
        MPTCLVPIYLRGTTIRNAASSTTSSNER
Subjt:  MPTCLVPIYLRGTTIRNAASSTTSSNER

XP_023528721.1 putative receptor-like protein kinase At3g47110 [Cucurbita pepo subsp. pepo]8.6e-0496.43Show/hide
Query:  MPTCLVPIYLRGTTIRNAASSTTSSNER
        MPTCLVPIY RGTTIRNAASSTTSSNER
Subjt:  MPTCLVPIYLRGTTIRNAASSTTSSNER

TrEMBL top hitse value%identityAlignment
A0A6J1F898 uncharacterized protein LOC1114417706.5e-05100Show/hide
Query:  MPTCLVPIYLRGTTIRNAASSTTSSNER
        MPTCLVPIYLRGTTIRNAASSTTSSNER
Subjt:  MPTCLVPIYLRGTTIRNAASSTTSSNER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCGCTTCTACCGTTCCACTTCCAATTCCTCCAGTCGGTTTCTCGGCCTTTCTCCTTGCCGGCGTGAACTTCGCGGAGGGGATGAAATTGCAGTCAGGGAAAGC
GATGAAATCAGTGGCGGATTGCTTGGTCTCCTGGATGAGGTTGGTAATATTTTATAAAGTCCACAGAGAAGGAAATAGAATTGAATGGGTCAAATCTAAGATTTCAAGAA
CGGTGGCGAGTGCTTATCACAAAGGTGGTGTCGAGTATGAAAGCATTGAAGTGAACATTTTCTTTCATAGAAGACTTTCACATTATGAAATAACGCTGGTACTGTACTTC
ATGGTTGACCAGCAGCCTCCAGTTTCGGTCATTACATTTCAAAAGGTAATTGCTTATCATTGTGGTTACATGCCGACTTGTTTGGTGCCCATATATCTCAGAGGAACCAC
AATAAGAAATGCGGCCTCATCTACAACTTCAAGCAATGAGAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCGCTTCTACCGTTCCACTTCCAATTCCTCCAGTCGGTTTCTCGGCCTTTCTCCTTGCCGGCGTGAACTTCGCGGAGGGGATGAAATTGCAGTCAGGGAAAGC
GATGAAATCAGTGGCGGATTGCTTGGTCTCCTGGATGAGGTTGGTAATATTTTATAAAGTCCACAGAGAAGGAAATAGAATTGAATGGGTCAAATCTAAGATTTCAAGAA
CGGTGGCGAGTGCTTATCACAAAGGTGGTGTCGAGTATGAAAGCATTGAAGTGAACATTTTCTTTCATAGAAGACTTTCACATTATGAAATAACGCTGGTACTGTACTTC
ATGGTTGACCAGCAGCCTCCAGTTTCGGTCATTACATTTCAAAAGGTAATTGCTTATCATTGTGGTTACATGCCGACTTGTTTGGTGCCCATATATCTCAGAGGAACCAC
AATAAGAAATGCGGCCTCATCTACAACTTCAAGCAATGAGAGGTAG
Protein sequenceShow/hide protein sequence
MASASTVPLPIPPVGFSAFLLAGVNFAEGMKLQSGKAMKSVADCLVSWMRLVIFYKVHREGNRIEWVKSKISRTVASAYHKGGVEYESIEVNIFFHRRLSHYEITLVLYF
MVDQQPPVSVITFQKVIAYHCGYMPTCLVPIYLRGTTIRNAASSTTSSNER