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Carg12495 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12495
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLaccase
Genome locationCarg_Chr14:378920..379294
RNA-Seq ExpressionCarg12495
SyntenyCarg12495
Gene Ontology termsGO:0046274 - lignin catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0005507 - copper ion binding (molecular function)
GO:0052716 - hydroquinone:oxygen oxidoreductase activity (molecular function)
InterPro domainsIPR008972 - Cupredoxin
IPR011707 - Multicopper oxidase, N-termianl
IPR045087 - Multicopper oxidase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017242.1 Laccase-4, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-41100Show/hide
Query:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
Subjt:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
XP_022934129.1 laccase-4-like [Cucurbita moschata]2.7e-41100Show/hide
Query:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
Subjt:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
XP_022983313.1 laccase-4-like [Cucurbita maxima]2.3e-3795.18Show/hide
Query:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        MESW V AFLLLAFCCLLPGLAESRVRHYK NVVLRKATRLCSTKPIVTVNGQFPGPTLYARE DTVLVKVVNHVKYNLSIHW
Subjt:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
XP_023526766.1 laccase-4-like [Cucurbita pepo subsp. pepo]3.3e-3997.59Show/hide
Query:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        MESW VRAFLLLAFCCLLPGLAESRVRHYKFNVVLRK TRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
Subjt:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
XP_038904173.1 laccase-4-like [Benincasa hispida]5.6e-3993.98Show/hide
Query:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        MESWWVRAF+LLAFCCLLPGLAES VRHYKFNVVLRKATRLCS+KPIVTVNGQFPGPT+YAREGD VLVKVVNHVKYNLSIHW
Subjt:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
TrEMBL top hitse value%identityAlignment
A0A1S3B5Q7 Laccase1.8e-3590.36Show/hide
Query:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        M S  VRAF+LLAFCCLLPGLAES VRHYKFNVVLRKATRLCS+KPIVTVNGQFPGPTLYAREGD VL+KVVNHVKYNLSIHW
Subjt:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
A0A5D3DMZ0 Laccase1.8e-3590.36Show/hide
Query:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        M S  VRAF+LLAFCCLLPGLAES VRHYKFNVVLRKATRLCS+KPIVTVNGQFPGPTLYAREGD VL+KVVNHVKYNLSIHW
Subjt:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
A0A6J1CWL9 Laccase5.6e-3792.77Show/hide
Query:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        MES WVRAF+LLA CCLLP LAESRVRHYKFNVVLRKATRLCS+KPIVTVNGQFPGPTLYARE DTVLVKVVNHVKYNLSIHW
Subjt:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
A0A6J1F1N9 Laccase1.3e-41100Show/hide
Query:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
Subjt:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
A0A6J1J7E9 Laccase1.1e-3795.18Show/hide
Query:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        MESW V AFLLLAFCCLLPGLAESRVRHYK NVVLRKATRLCSTKPIVTVNGQFPGPTLYARE DTVLVKVVNHVKYNLSIHW
Subjt:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
SwissProt top hitse value%identityAlignment
O80434 Laccase-47.3e-2663.86Show/hide
Query:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        M S  V    L++F  + P  +ES VRHYKFNVV++  TRLCS+KP VTVNG++PGPT+YARE DT+L+KVVNHVKYN+SIHW
Subjt:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
Q0IQU1 Laccase-222.1e-2571.43Show/hide
Query:  AFLLLAFCCLLPGL-AESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        + LL+A C LL  L A +  RHYKFNVV+R  TRLCSTKPI+TVNG+FPGPTLYAREGD VLVKVVNHV +N++IHW
Subjt:  AFLLLAFCCLLPGL-AESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
Q1PDH6 Laccase-163.4e-2370Show/hide
Query:  FCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        F  L P    S +RHYKFN V+   T+LCS+KPIVTVNGQFPGPT+ AREGDT+L+KVVNHVKYN+SIHW
Subjt:  FCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
Q6ID18 Laccase-105.4e-2162.67Show/hide
Query:  FLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        F LLAF    P      +R Y FNVV ++ TR+CSTK IVTVNG+FPGPT+YA E DT+LV VVN+VKYN+SIHW
Subjt:  FLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
Q8VZA1 Laccase-113.0e-1954.55Show/hide
Query:  LLAFCCLLPGL----AESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        L  FC LL  L     ++ V+ Y+F+V ++  +R+C+ KPIVTVNG FPGPT+YAREGD V++ V NHV+YN+SIHW
Subjt:  LLAFCCLLPGL----AESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
Arabidopsis top hitse value%identityAlignment
AT2G29130.1 laccase 24.0e-1951.81Show/hide
Query:  WVRAFLLLAFCCL----LPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        WV  +LL+AF       +   +    RHY+F++ L+  TRLC TK IVTVNG+FPGP + AREGD + +KVVNHV  N+SIHW
Subjt:  WVRAFLLLAFCCL----LPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
AT2G38080.1 Laccase/Diphenol oxidase family protein5.2e-2763.86Show/hide
Query:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        M S  V    L++F  + P  +ES VRHYKFNVV++  TRLCS+KP VTVNG++PGPT+YARE DT+L+KVVNHVKYN+SIHW
Subjt:  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
AT5G01190.1 laccase 103.9e-2262.67Show/hide
Query:  FLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        F LLAF    P      +R Y FNVV ++ TR+CSTK IVTVNG+FPGPT+YA E DT+LV VVN+VKYN+SIHW
Subjt:  FLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
AT5G03260.1 laccase 112.1e-2054.55Show/hide
Query:  LLAFCCLLPGL----AESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        L  FC LL  L     ++ V+ Y+F+V ++  +R+C+ KPIVTVNG FPGPT+YAREGD V++ V NHV+YN+SIHW
Subjt:  LLAFCCLLPGL----AESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
AT5G58910.1 laccase 163.1e-1977.55Show/hide
Query:  LRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW
        +   T+LCS+KPIVTVNGQFPGPT+ AREGDT+L+KVVNHVKYN+SIHW
Subjt:  LRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTTGGTGGGTTCGAGCTTTTCTCTTATTGGCATTTTGCTGCCTTCTTCCTGGTTTGGCTGAGTCCAGAGTTCGCCATTACAAATTCAATGTGGTGTTGCGGAA
GGCAACCAGACTTTGCTCAACCAAGCCCATTGTCACTGTCAATGGACAGTTCCCTGGACCAACCCTTTACGCTAGGGAGGGCGACACCGTGCTTGTCAAAGTCGTCAACC
ACGTCAAATATAACCTTTCAATTCACTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTTGGTGGGTTCGAGCTTTTCTCTTATTGGCATTTTGCTGCCTTCTTCCTGGTTTGGCTGAGTCCAGAGTTCGCCATTACAAATTCAATGTGGTGTTGCGGAA
GGCAACCAGACTTTGCTCAACCAAGCCCATTGTCACTGTCAATGGACAGTTCCCTGGACCAACCCTTTACGCTAGGGAGGGCGACACCGTGCTTGTCAAAGTCGTCAACC
ACGTCAAATATAACCTTTCAATTCACTGGTAA
Protein sequenceShow/hide protein sequence
MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW