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Carg12535 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12535
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHeat shock protein DnaJ, cysteine-rich domain containing protein
Genome locationCarg_Chr14:536191..537333
RNA-Seq ExpressionCarg12535
SyntenyCarg12535
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0046274 - lignin catabolic process (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0005507 - copper ion binding (molecular function)
GO:0052716 - hydroquinone:oxygen oxidoreductase activity (molecular function)
InterPro domainsIPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442527.1 PREDICTED: uncharacterized protein LOC103486375 [Cucumis melo]1.6e-5988.89Show/hide
Query:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLC+FPRISSTEPIKQ+PA APFPPSN P+RPS LSLRQSS  H+RISTVVAA+GDVS+DGTTYLIAGA+AVALVGTAFPI FSRKDLCPEC+GAGFV
Subjt:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRSG+ALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
XP_022935020.1 uncharacterized protein LOC111442008 [Cucurbita moschata]8.7e-66100Show/hide
Query:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
Subjt:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
XP_022983996.1 uncharacterized protein LOC111482446 [Cucurbita maxima]1.1e-6397.04Show/hide
Query:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSS KH R STVVAA+GDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
Subjt:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
XP_023528629.1 uncharacterized protein LOC111791489 [Cucurbita pepo subsp. pepo]8.7e-66100Show/hide
Query:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
Subjt:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
XP_038905250.1 uncharacterized protein LOC120091333 [Benincasa hispida]7.1e-6091.85Show/hide
Query:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLC+FPRISSTEPIKQ P AAPFP SN P+RPSALSLRQ S KH+RIS VVAA+GDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
Subjt:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
TrEMBL top hitse value%identityAlignment
A0A0A0LDN8 Uncharacterized protein1.5e-5888.15Show/hide
Query:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLC+FPRISSTEPIKQ+PA APFPPSN  ++PS LSLRQSS  H+RISTVVAA+GDVS+DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAGFV
Subjt:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRS +ALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
A0A1S3B5E7 uncharacterized protein LOC1034863757.7e-6088.89Show/hide
Query:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLC+FPRISSTEPIKQ+PA APFPPSN P+RPS LSLRQSS  H+RISTVVAA+GDVS+DGTTYLIAGA+AVALVGTAFPI FSRKDLCPEC+GAGFV
Subjt:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRSG+ALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
A0A6J1F9E5 uncharacterized protein LOC1114420084.2e-66100Show/hide
Query:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
Subjt:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
A0A6J1I3R1 uncharacterized protein LOC1114702761.1e-5587.41Show/hide
Query:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLC+FPRISS +PIK  PAAAPFPPSN P RPSALSLRQSS   +R ST+VAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCP CDGAGFV
Subjt:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        R+SGAALRANAARKDQ QIVC+RCNGLGKLNQVDK
Subjt:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
A0A6J1J3Y5 uncharacterized protein LOC1114824465.1e-6497.04Show/hide
Query:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSS KH R STVVAA+GDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV
Subjt:  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G02160.1 unknown protein3.8e-3571.57Show/hide
Query:  PSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIVCARCNGLGKLNQV
        PS  ++    +K    S VVAA+GDVS+DGT YLI GA+AVALVGTAFPILF RKD CPECDGAGFVR+ G  LRANAARKD  QIVCA CNGLGKLNQ+
Subjt:  PSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIVCARCNGLGKLNQV

Query:  DK
        DK
Subjt:  DK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCTTGTGTACATTTCCACGTATTTCTTCCACAGAACCCATCAAGCAAACGCCCGCCGCCGCCCCTTTTCCGCCCTCCAATCAGCCGATGAGACCCTCGGCGTT
GTCCCTCCGCCAAAGCAGCAGCAAGCACCGGAGAATTTCTACAGTGGTCGCCGCCATTGGAGATGTCTCCGCCGATGGCACCACCTACTTGATCGCCGGCGCTGTAGCTG
TGGCTCTTGTCGGAACCGCCTTCCCTATCCTCTTCTCTCGCAAAGACCTGTGTCCGGAATGCGACGGCGCAGGGTTTGTCCGGCGATCAGGAGCGGCGCTGAGGGCTAAT
GCGGCTCGCAAAGACCAAACTCAGATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAACCAAGTGGACAAATAA
mRNA sequenceShow/hide mRNA sequence
TAGAGATGTCAGGACAAAATTAGAAGGGAGAGTTAGTCGCTAAAAAATTCATATGGTGGGCCATTCTTATCTACACAACAATCAGAACCTTAAGTCGGATATAGCCTTAT
CCAGATTTCATTCAACTTCAAAACATCCCTCCATCCTTTCCAACCACCAAATTATAAAAAATCTGTTCTTGATCTTCTTCCATCCCTGAATTCAGATTCAGTTTCAGTCC
TCTGGAAAACATGGCATCCTTGTGTACATTTCCACGTATTTCTTCCACAGAACCCATCAAGCAAACGCCCGCCGCCGCCCCTTTTCCGCCCTCCAATCAGCCGATGAGAC
CCTCGGCGTTGTCCCTCCGCCAAAGCAGCAGCAAGCACCGGAGAATTTCTACAGTGGTCGCCGCCATTGGAGATGTCTCCGCCGATGGCACCACCTACTTGATCGCCGGC
GCTGTAGCTGTGGCTCTTGTCGGAACCGCCTTCCCTATCCTCTTCTCTCGCAAAGACCTGTGTCCGGAATGCGACGGCGCAGGGTTTGTCCGGCGATCAGGAGCGGCGCT
GAGGGCTAATGCGGCTCGCAAAGACCAAACTCAGATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAACCAAGTGGACAAATAAATTAAAACCTGCCTTTTTTAGC
CCCATCATAAATTCCATACTTTATTAATGCTGTAATAATCTATTTTTAATATATTTTAGTCGATGTCCTTCGAGTCTTTGGAACTGTAATATTTGTTTTTAACCTAACAT
TTGAATTCGAATTAGTTTTTTTTTTTTTTTAATTATGCTTTGACCGATATAATATATTTAACGTTAAATGACATTATTAACGAGGTCATT
Protein sequenceShow/hide protein sequence
MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRAN
AARKDQTQIVCARCNGLGKLNQVDK