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Carg12536 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12536
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPeptidase A1 domain-containing protein
Genome locationCarg_Chr14:540619..540936
RNA-Seq ExpressionCarg12536
SyntenyCarg12536
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0012501 - programmed cell death (biological process)
GO:0046274 - lignin catabolic process (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0005507 - copper ion binding (molecular function)
GO:0052716 - hydroquinone:oxygen oxidoreductase activity (molecular function)
InterPro domainsIPR001461 - Aspartic peptidase A1 family
IPR021109 - Aspartic peptidase domain superfamily
IPR032799 - Xylanase inhibitor, C-terminal
IPR033121 - Peptidase family A1 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017283.1 Aspartic proteinase PCS1, partial [Cucurbita argyrosperma subsp. argyrosperma]9.2e-55100Show/hide
Query:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
        MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
Subjt:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK

Query:  LGMGL
        LGMGL
Subjt:  LGMGL

XP_022934632.1 uncharacterized protein LOC111441767 [Cucurbita moschata]9.2e-55100Show/hide
Query:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
        MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
Subjt:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK

Query:  LGMGL
        LGMGL
Subjt:  LGMGL

XP_022935018.1 aspartic proteinase PCS1 [Cucurbita moschata]9.2e-55100Show/hide
Query:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
        MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
Subjt:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK

Query:  LGMGL
        LGMGL
Subjt:  LGMGL

XP_023528617.1 aspartic proteinase PCS1 isoform X1 [Cucurbita pepo subsp. pepo]9.2e-55100Show/hide
Query:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
        MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
Subjt:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK

Query:  LGMGL
        LGMGL
Subjt:  LGMGL

XP_023528618.1 aspartic proteinase PCS1 isoform X2 [Cucurbita pepo subsp. pepo]9.2e-55100Show/hide
Query:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
        MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
Subjt:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK

Query:  LGMGL
        LGMGL
Subjt:  LGMGL

TrEMBL top hitse value%identityAlignment
A0A0A0LAI7 Aspartic proteinase nepenthesin-21.4e-5398.1Show/hide
Query:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
        MDLCYRVP NQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGE RGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
Subjt:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK

Query:  LGMGL
        LGMGL
Subjt:  LGMGL

A0A5D3DN23 Aspartic proteinase PCS11.4e-5398.1Show/hide
Query:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
        MDLCYRVP NQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGE RGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
Subjt:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK

Query:  LGMGL
        LGMGL
Subjt:  LGMGL

A0A6J1F3C7 Laccase4.4e-55100Show/hide
Query:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
        MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
Subjt:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK

Query:  LGMGL
        LGMGL
Subjt:  LGMGL

A0A6J1F9C1 aspartic proteinase PCS14.4e-55100Show/hide
Query:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
        MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
Subjt:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK

Query:  LGMGL
        LGMGL
Subjt:  LGMGL

A0A6J1J2F5 aspartic proteinase PCS14.4e-55100Show/hide
Query:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
        MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK
Subjt:  MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQK

Query:  LGMGL
        LGMGL
Subjt:  LGMGL

SwissProt top hitse value%identityAlignment
Q9LZL3 Aspartic proteinase PCS12.4e-3461.68Show/hide
Query:  MDLCYRVPMNQTR---LPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLA
        MDLCYR+   + R   L  LP+V+LVF GAE+ V+G  +LYRVP    GNDS++CFTFGNSDL+G+EA+VIGH HQQN+W+EFDL++SRIGLA + CD++
Subjt:  MDLCYRVPMNQTR---LPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLA

Query:  GQKLGMG
        GQ+LG+G
Subjt:  GQKLGMG

Arabidopsis top hitse value%identityAlignment
AT1G66180.1 Eukaryotic aspartyl protease family protein7.8e-1237.89Show/hide
Query:  DLCYRVPMNQTRLPPL-PSVTLVF-RGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRC
        D+C+    N   +P L   +  VF RG E+ V  +R+L  V G       IHC   G S +LG  + +IG++HQQN+W+EFD+   R+G A+  C
Subjt:  DLCYRVPMNQTRLPPL-PSVTLVF-RGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRC

AT2G39710.1 Eukaryotic aspartyl protease family protein2.8e-3362.26Show/hide
Query:  MDLCYRV-PMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGE-IRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLA-EIRCDLA
        MDLCY+V    +     LP V+L+FRGAEM+V+G ++LYRV G    G + ++CFTFGNSDLLG+EAFVIGH HQQNVWMEFDL KSR+G A  +RCDLA
Subjt:  MDLCYRV-PMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGE-IRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLA-EIRCDLA

Query:  GQKLGM
         Q+LG+
Subjt:  GQKLGM

AT5G02190.1 Eukaryotic aspartyl protease family protein1.7e-3561.68Show/hide
Query:  MDLCYRVPMNQTR---LPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLA
        MDLCYR+   + R   L  LP+V+LVF GAE+ V+G  +LYRVP    GNDS++CFTFGNSDL+G+EA+VIGH HQQN+W+EFDL++SRIGLA + CD++
Subjt:  MDLCYRVPMNQTR---LPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLA

Query:  GQKLGMG
        GQ+LG+G
Subjt:  GQKLGMG

AT5G37540.1 Eukaryotic aspartyl protease family protein1.1e-1038.89Show/hide
Query:  RGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDL
        RG E+ V    +L  V G       IHC   G S +LG  + +IG++HQQN+W+EFD+   R+G ++  C L
Subjt:  RGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDL

AT5G45120.1 Eukaryotic aspartyl protease family protein2.4e-0531.25Show/hide
Query:  DLCYRVPMNQTRLPPL--------PSVTLVF-RGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGN-SDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAE
        DLCY+VP     L  L        PS+T  F   A + +      Y +     G+  + C  F N  D     A V G   QQNV + +DL+K RIG   
Subjt:  DLCYRVPMNQTRLPPL--------PSVTLVF-RGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGN-SDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAE

Query:  IRCDLAGQKLGM
        + C L     G+
Subjt:  IRCDLAGQKLGM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTTTGTTACCGGGTTCCAATGAATCAAACCCGGCTCCCGCCACTGCCATCGGTGACGCTAGTGTTTCGCGGCGCCGAAATGACGGTTACCGGCGACCGGATTCT
GTACCGGGTGCCCGGAGAAATAAGAGGAAACGATTCGATTCACTGTTTTACATTCGGAAATTCGGATCTCCTCGGCGTGGAAGCGTTTGTAATTGGGCATCTTCATCAAC
AAAACGTGTGGATGGAATTCGATCTGAAAAAATCCCGGATCGGGTTGGCGGAGATTCGGTGCGATTTAGCGGGTCAGAAGTTGGGTATGGGCCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCTTTGTTACCGGGTTCCAATGAATCAAACCCGGCTCCCGCCACTGCCATCGGTGACGCTAGTGTTTCGCGGCGCCGAAATGACGGTTACCGGCGACCGGATTCT
GTACCGGGTGCCCGGAGAAATAAGAGGAAACGATTCGATTCACTGTTTTACATTCGGAAATTCGGATCTCCTCGGCGTGGAAGCGTTTGTAATTGGGCATCTTCATCAAC
AAAACGTGTGGATGGAATTCGATCTGAAAAAATCCCGGATCGGGTTGGCGGAGATTCGGTGCGATTTAGCGGGTCAGAAGTTGGGTATGGGCCTGTAA
Protein sequenceShow/hide protein sequence
MDLCYRVPMNQTRLPPLPSVTLVFRGAEMTVTGDRILYRVPGEIRGNDSIHCFTFGNSDLLGVEAFVIGHLHQQNVWMEFDLKKSRIGLAEIRCDLAGQKLGMGL